Pooled Screening File Downloads

This page contains the most up to date versions of our pooled screening file downloads. If you are looking for an older version of one of these files, you may be able to find it here:

General Information About File Downloads

These files are provided to aid in the analysis of pooled screens.

A brief description of the file formats and their contents are as follows. Please see the paragraph below for more detailed information about file columns and headers:

File Column and Header Information

Information about the columns and the order they are presented in the file formats listed above is found here for your reference.

Current File Downloads

Please note: The files in this table are the most current files of each type, generated by a script that runs nightly and assesses if changes are needed. The date of the last update is encoded following the underscore after the clone pool identifier in YYYYMMDD format. Be aware that these files may go for periods of time without change.

Clone Pool Taxon Pool Description Construct Type Vectors Distinct Barcodes Chip Files Reference File
1 CP0001 Human 55K Human Pool shRNA pLKO.1,pLKO_TRC005 55754 CP0001_20160717.chip
CP0001_20160717_19mer_trans.chip
CP0001_20150109_reference.csv
2 CP0002 Mouse 40K Mouse Pool shRNA pLKO.1 40010 CP0002_20160717.chip
CP0002_20160717_19mer_trans.chip
CP0002_20150109_reference.csv
3 CP0003 Human 90K Human Pool shRNA pLKO.1 93125 CP0003_20160717.chip
CP0003_20160717_19mer_trans.chip
CP0003_20150109_reference.csv
4 CP0011 Mouse Mouse Kinase Pool shRNA pLKO.1,pLKO_TRC005 3362 CP0011_20160717.chip
CP0011_20160717_19mer_trans.chip
CP0011_20131120_reference.csv