Annotation Summary for Cell Line: CCF-STTG1  

Cell line primary name: CCF-STTG1
Cell line aliases:
Gender: F
Site Primary: central_nervous_system
Histology: glioma
Hist Subtype1: astrocytoma
Notes:
Source: ATCC
Expression arrays: MAKER_p_NCLE_RNA7_HG-U133_Plus_2_A06_454776
SNP arrays: LOBBY_p_NCLE_DNAAffy6_GenomeWideSNP_6_D03_437286
Oncomap: yes
Hybrid Capture Sequencing: yes


Mutations in CCF-STTG1

GeneProtein
Change
ChrStartEnd SampleNCBI
Build
Variant
Classification
Variant TypeReference
Allele
Tumor
Allele 1
dbSNP IDAnnotation
Transcript
Other
Transcripts
Method View
Reads
Mutation
Assessor
ADAM17 2 9630245 9630245 CCFSTTG1_CENTRA... 37 3'UTR Del T - uc002qzu.2 IAH1_uc010yiz.1... Hybrid_Cap...
ADAM28 8 24211994 24211997 CCFSTTG1_CENTRA... 37 3'UTR Del CTAT - rs10610134 uc003xdy.2 ADAM28_uc011laa... Hybrid_Cap...
ALPK1 4 113347609 113347610 CCFSTTG1_CENTRA... 37 Intron Ins - T rs68137453 uc003iap.3 ALPK1_uc003ian.... Hybrid_Cap...
ARID1A p.P1144T 1 27099014 27099014 CCFSTTG1_CENTRA... 37 Missense_Mutation SNP C A uc001bmv.1 ARID1A_uc001bmt... Hybrid_Cap... view
BCR 22 23632777 23632778 CCFSTTG1_CENTRA... 37 Intron Ins - T uc002zww.2 BCR_uc002zwx.2_... Hybrid_Cap...
BID 22 18256521 18256521 CCFSTTG1_CENTRA... 37 5'UTR SNP A C uc002znc.1 BID_uc002znd.1_... Hybrid_Cap... view
BIRC5 17 76219784 76219785 CCFSTTG1_CENTRA... 37 3'UTR Ins - AA uc002jvf.2 BIRC5_uc002jvg.... Hybrid_Cap...
BLM 15 91358513 91358513 CCFSTTG1_CENTRA... 37 3'UTR SNP C A uc002bpr.2 BLM_uc010uqh.1_... Hybrid_Cap... view
BRAF p.R146Q 7 140534476 140534476 CCFSTTG1_CENTRA... 37 Missense_Mutation SNP C T uc003vwc.3 Hybrid_Cap... view
BTG1 12 92537706 92537707 CCFSTTG1_CENTRA... 37 3'UTR Ins - T rs33983967 uc001tby.3 BTG1_uc001tbv.1... Hybrid_Cap...
C15ORF2 p.S1098A 15 24924306 24924306 CCFSTTG1_CENTRA... 37 Missense_Mutation SNP T G uc001ywo.2 Hybrid_Cap... view
CACNA1F p.I146V X 49087397 49087397 CCFSTTG1_CENTRA... 37 Missense_Mutation SNP T C uc004dnb.2 CACNA1F_uc010ni... Hybrid_Cap... view
CARS 11 3022280 3022280 CCFSTTG1_CENTRA... 37 3'UTR SNP T C uc001lxf.2 CARS_uc009ydu.2... Hybrid_Cap... view
CDKN1A p.R190W 6 36653548 36653548 CCFSTTG1_CENTRA... 37 Missense_Mutation SNP C T uc011dtq.1 CDKN1A_uc003omm... Hybrid_Cap... view
CHIC2 4 54876131 54876132 CCFSTTG1_CENTRA... 37 3'UTR Del AC - rs68107873;rs4437313 uc003haj.1 PDGFRA_uc003haa... Hybrid_Cap...
CLTCL1 p.V1201_splice 22 19189003 19189004 CCFSTTG1_CENTRA... 37 Splice_Site_Ins Ins - C rs11386977 uc002zpb.2 CLTCL1_uc011agv... Hybrid_Cap...
CSNK1G3 5 122950254 122950255 CCFSTTG1_CENTRA... 37 3'UTR Ins - T rs117378469 uc003ktl.2 CSNK1G3_uc003kt... Hybrid_Cap...
CTBP2 p.K974fs 10 126678123 126678123 CCFSTTG1_CENTRA... 37 Frame_Shift_Del Del T - uc001lie.3 CTBP2_uc009yak.... Hybrid_Cap...
CXCR1 p.S123R 2 219029566 219029566 CCFSTTG1_CENTRA... 37 Missense_Mutation SNP A T uc002vhc.2 Hybrid_Cap... view
DACH1 13 72014625 72014626 CCFSTTG1_CENTRA... 37 3'UTR Ins - T rs117109529 uc010thn.1 DACH1_uc010tho.... Hybrid_Cap...
DST p.R724C 6 56505162 56505162 CCFSTTG1_CENTRA... 37 Missense_Mutation SNP G A uc003pdf.2 DST_uc003pcz.3_... Hybrid_Cap... view
EP300 22 41574970 41574972 CCFSTTG1_CENTRA... 37 3'UTR Del GTA - rs76489032 uc003azl.3 Hybrid_Cap...
EWSR1 22 29687480 29687481 CCFSTTG1_CENTRA... 37 Intron Ins - C rs66871950 uc003aev.2 EWSR1_uc003aet.... Hybrid_Cap...
FGFR1OP 6 167453519 167453520 CCFSTTG1_CENTRA... 37 3'UTR Ins - T rs115519488 uc003qvj.2 CCR6_uc003qvl.2... Hybrid_Cap...
FGFR3 4 1809128 1809129 CCFSTTG1_CENTRA... 37 3'UTR Del GT - uc003gdu.2 FGFR3_uc003gdr.... Hybrid_Cap...
FOXP1 3 71008341 71008342 CCFSTTG1_CENTRA... 37 3'UTR Ins - T rs11433724;rs114233617 uc003dol.2 FOXP1_uc003dom.... Hybrid_Cap...
GPR112 p.D2657del X 135474445 135474447 CCFSTTG1_CENTRA... 37 In_Frame_Del Del GAT - rs3030295 uc004ezu.1 GPR112_uc010nsb... Hybrid_Cap...
GRIA3 X 122318386 122318387 CCFSTTG1_CENTRA... 37 Splice_Site_Ins Ins - G rs66632982 uc004etq.3 GRIA3_uc004etr.... Hybrid_Cap...
GUCY2C 12 14827464 14827466 CCFSTTG1_CENTRA... 37 Intron Del ATC - rs72525754;rs3083879 uc001rcd.2 GUCY2C_uc009zhz... Hybrid_Cap...
HIF1A 14 62213929 62213930 CCFSTTG1_CENTRA... 37 3'UTR Ins - T rs67890419 uc001xfs.2 HIF1A_uc001xfq.... Hybrid_Cap...
HNF1A 12 121434630 121434631 CCFSTTG1_CENTRA... 37 Intron Ins - TCATTCAT rs75100977 uc010szn.1 HNF1A_uc001tze.... Hybrid_Cap...
HOXD10 p.T160N 2 176982040 176982040 CCFSTTG1_CENTRA... 37 Missense_Mutation SNP C A uc002ukj.2 Hybrid_Cap... view
ITGB4 p.R791H 17 73736078 73736078 CCFSTTG1_CENTRA... 37 Missense_Mutation SNP G A uc002jpg.2 ITGB4_uc002jph.... Hybrid_Cap... view
KIAA0802 p.H1272Y 18 8825322 8825322 CCFSTTG1_CENTRA... 37 Missense_Mutation SNP C T uc002knr.2 KIAA0802_uc002k... Hybrid_Cap... view
KLK7 19 51480672 51480675 CCFSTTG1_CENTRA... 37 3'UTR Del GGTT - uc002puo.2 KLK7_uc002pup.2... Hybrid_Cap...
LATS2 13 21620222 21620223 CCFSTTG1_CENTRA... 37 5'UTR Ins - A rs61240127;rs115723063 uc009zzs.2 LATS2_uc001unr.... Hybrid_Cap...
MAF 16 79628537 79628537 CCFSTTG1_CENTRA... 37 Intron Del T - uc002ffm.2 MAF_uc002ffn.2_... Hybrid_Cap...
MAML3 p.Q767_splice 4 140651585 140651587 CCFSTTG1_CENTRA... 37 Splice_Site_Del Del CTG - uc003ihz.1 MGST2_uc010ioi.... Hybrid_Cap...
MAP3K1 p.T949del 5 56177849 56177851 CCFSTTG1_CENTRA... 37 In_Frame_Del Del CAA - uc003jqw.3 Hybrid_Cap...
MAP3K14 p.R218_splice 17 43364293 43364294 CCFSTTG1_CENTRA... 37 Splice_Site_Ins Ins - G rs66766023 uc002iiw.1 MAP3K14_uc010da... Hybrid_Cap...
MAPK14 6 36076345 36076354 CCFSTTG1_CENTRA... 37 3'UTR Del GTGTG... - rs80147786 uc003olp.2 MAPK14_uc003olq... Hybrid_Cap...
MLLT3 9 20346377 20346378 CCFSTTG1_CENTRA... 37 3'UTR Ins - A rs66943046 uc003zoe.2 MLLT3_uc011lne.... Hybrid_Cap...
NCAM1 11 112832307 112832308 CCFSTTG1_CENTRA... 37 5'UTR Ins - A rs117108942 uc009yyq.1 NCAM1_uc001pno.... Hybrid_Cap...
NCAM1 11 112832340 112832340 CCFSTTG1_CENTRA... 37 5'UTR Del C - uc009yyq.1 NCAM1_uc001pno.... Hybrid_Cap...
NCOA3 p.QQQ1272del 20 46279815 46279823 CCFSTTG1_CENTRA... 37 In_Frame_Del Del GCAGC... - uc002xtk.2 NCOA3_uc010ght.... Hybrid_Cap...
NOTCH4 p.15_16LL>L 6 32191659 32191661 CCFSTTG1_CENTRA... 37 In_Frame_Del Del AGC - uc003obb.2 NOTCH4_uc011dpu... Hybrid_Cap...
NR1H2 p.176_177insQ 19 50881820 50881821 CCFSTTG1_CENTRA... 37 In_Frame_Ins Ins - AAC rs66783852;rs112359270 uc010enw.2 NR1H2_uc002prv.... Hybrid_Cap...
PAX3 2 223158653 223158653 CCFSTTG1_CENTRA... 37 Intron Del T - rs112753212 uc002vmt.1 PAX3_uc002vmy.1... Hybrid_Cap...
PDE4DIP p.Q1665fs 1 144873963 144873963 CCFSTTG1_CENTRA... 37 Frame_Shift_Del Del T - uc001elw.3 NBPF10_uc009wir... Hybrid_Cap...
PDE4DIP p.V486fs 1 144917828 144917828 CCFSTTG1_CENTRA... 37 Frame_Shift_Del Del A - uc001elw.3 NBPF10_uc009wir... Hybrid_Cap...
PGR 11 100933598 100933599 CCFSTTG1_CENTRA... 37 Intron Ins - AATGA rs35148438 uc001pgh.2 PGR_uc001pgg.2_... Hybrid_Cap...
PIK3C2G p.P129del 12 18435399 18435401 CCFSTTG1_CENTRA... 37 In_Frame_Del Del CCC - uc010sib.1 PIK3C2G_uc001rd... Hybrid_Cap...
PMS1 2 190670539 190670540 CCFSTTG1_CENTRA... 37 Intron Ins - A rs3214425 uc002urh.3 PMS1_uc010zga.1... Hybrid_Cap...
PRKDC p.L1244fs 8 48805816 48805817 CCFSTTG1_CENTRA... 37 Frame_Shift_Ins Ins - G rs67588121 uc003xqi.2 PRKDC_uc003xqj.... Hybrid_Cap...
PTEN p.L112R 10 89692851 89692851 CCFSTTG1_CENTRA... 37 Missense_Mutation SNP T G uc001kfb.2 Hybrid_Cap... view
PTPN11 p.R498W 12 112926872 112926872 CCFSTTG1_CENTRA... 37 Missense_Mutation SNP C T uc001ttx.2 Hybrid_Cap... view
RBPJ p.R238* 4 26426291 26426291 CCFSTTG1_CENTRA... 37 Nonsense_Mutation SNP C T rs5007634 uc003grx.1 RBPJ_uc003gry.1... Hybrid_Cap... view
RECQL4 p.R766fs 8 145738768 145738768 CCFSTTG1_CENTRA... 37 Frame_Shift_Del Del G - uc003zdj.2 Hybrid_Cap...
RPS6KA5 14 91360733 91360734 CCFSTTG1_CENTRA... 37 Intron Ins - T rs77438853 uc001xys.2 RPS6KA5_uc010tw... Hybrid_Cap...
STAT1 2 191840353 191840353 CCFSTTG1_CENTRA... 37 Intron Del T - uc002usj.2 STAT1_uc010fse.... Hybrid_Cap...
STK31 7 23872024 23872025 CCFSTTG1_CENTRA... 37 3'UTR Ins - TTTG rs66787534 uc003sws.3 STK31_uc003swt.... Hybrid_Cap...
TEC 4 48139307 48139310 CCFSTTG1_CENTRA... 37 3'UTR Del TTAT - rs79098351 uc003gxz.2 Hybrid_Cap...
TGFB2 1 218519928 218519929 CCFSTTG1_CENTRA... 37 5'UTR Ins - AAAC uc001hln.2 TGFB2_uc001hll.... Hybrid_Cap...
TLK1 2 171850178 171850179 CCFSTTG1_CENTRA... 37 3'UTR Ins - AA rs71008739 uc002ugo.2 TLK1_uc002ugn.2... Hybrid_Cap...
TMEM123 11 102269398 102269398 CCFSTTG1_CENTRA... 37 3'UTR Del G - uc001pha.2 TMEM123_uc009yx... Hybrid_Cap...
TP63 3 189507518 189507519 CCFSTTG1_CENTRA... 37 Intron Ins - AGAG rs62702062;rs79714037 uc003fry.2 TP63_uc003frx.2... Hybrid_Cap...
TRPS1 8 116635872 116635873 CCFSTTG1_CENTRA... 37 5'UTR Ins - A rs76893349 uc003yny.2 TRPS1_uc011lhy.... Hybrid_Cap...
TTN 2 179613929 179613929 CCFSTTG1_CENTRA... 37 Intron SNP C A uc010zfg.1 TTN_uc010zfh.1_... Hybrid_Cap... view
VEGFC p.S419_splice 4 177605082 177605084 CCFSTTG1_CENTRA... 37 Splice_Site_Del Del TCA - uc003ius.1 Hybrid_Cap...
ZNF217 p.R937K 20 52192493 52192493 CCFSTTG1_CENTRA... 37 Missense_Mutation SNP C T uc002xwq.3 ZNF217_uc010gij... Hybrid_Cap... view