Annotation Summary for Cell Line: Caov-3  

Cell line primary name: Caov-3
Cell line aliases:
Gender: F
Site Primary: ovary
Histology: carcinoma
Hist Subtype1: adenocarcinoma
Notes:
Source: ATCC
Expression arrays: METIS_p_NCLE_RNA1_Human_U133_Plus_2.0_A08_240864
SNP arrays: ARLES_p_NCLE_DNAAffy2_S_GenomeWideSNP_6_A10_256020
Oncomap: yes
Hybrid Capture Sequencing: yes


Mutations in Caov-3

GeneProtein
Change
ChrStartEnd SampleNCBI
Build
Variant
Classification
Variant TypeReference
Allele
Tumor
Allele 1
dbSNP IDAnnotation
Transcript
Other
Transcripts
Method View
Reads
Mutation
Assessor
AAK1 p.541_542QQ>Q 2 69741754 69741756 CAOV3_OVARY 37 In_Frame_Del Del TGT - rs55712143 uc002sfp.2 AAK1_uc010fdk.2... Hybrid_Cap...
ADAM17 2 9630245 9630245 CAOV3_OVARY 37 3'UTR Del T - uc002qzu.2 IAH1_uc010yiz.1... Hybrid_Cap...
ADAM28 8 24211994 24211997 CAOV3_OVARY 37 3'UTR Del CTAT - rs10610134 uc003xdy.2 ADAM28_uc011laa... Hybrid_Cap...
AKAP12 p.G269del 6 151670330 151670332 CAOV3_OVARY 37 In_Frame_Del Del AGG - rs111963593;rs111653642 uc011eep.1 AKAP12_uc003qoe... Hybrid_Cap...
AKAP12 p.1531_1532insE 6 151674116 151674117 CAOV3_OVARY 37 In_Frame_Ins Ins - GAG rs34737819 uc011eep.1 AKAP12_uc003qoe... Hybrid_Cap...
AKAP6 p.P1573L 14 33291737 33291737 CAOV3_OVARY 37 Missense_Mutation SNP C T uc001wrq.2 Hybrid_Cap... view
AKAP9 p.1335_1336insQ 7 91652178 91652179 CAOV3_OVARY 37 In_Frame_Ins Ins - AAC rs34756483 uc003ulg.2 AKAP9_uc003ule.... Hybrid_Cap...
ALPK2 p.EDTST1006del 18 56204388 56204402 CAOV3_OVARY 37 In_Frame_Del Del CAGTT... - rs60644017;rs117623369 uc002lhj.3 ALPK2_uc002lhk.... Hybrid_Cap...
BCR 22 23631813 23631814 CAOV3_OVARY 37 Intron Ins - C rs66503844 uc002zww.2 BCR_uc002zwx.2_... Hybrid_Cap...
CABC1 1 227171585 227171585 CAOV3_OVARY 37 Intron Del T - uc001hqm.1 CABC1_uc001hqn.... Hybrid_Cap...
CLTCL1 p.V1201_splice 22 19189003 19189004 CAOV3_OVARY 37 Splice_Site_Ins Ins - C rs11386977 uc002zpb.2 CLTCL1_uc011agv... Hybrid_Cap...
CNTN6 3 1339681 1339686 CAOV3_OVARY 37 Intron Del GTTTT... - uc003boz.2 CNTN6_uc010hbo.... Hybrid_Cap...
CTNNA2 p.P603A 2 80801353 80801353 CAOV3_OVARY 37 Missense_Mutation SNP C G uc010ysh.1 CTNNA2_uc010yse... Hybrid_Cap... view
CXCR4 2 136873548 136873549 CAOV3_OVARY 37 5'UTR DNP AA TT rs2680880 uc002tuy.2 CXCR4_uc010fnk.... Hybrid_Cap...
EGFR p.R255Q 7 55221720 55221720 CAOV3_OVARY 37 Missense_Mutation SNP G A uc003tqk.2 EGFR_uc003tqh.2... Hybrid_Cap... view
EPHA5 4 66189753 66189754 CAOV3_OVARY 37 3'UTR Ins - T rs67487372 uc011cah.1 EPHA5_uc003hcx.... Hybrid_Cap...
EPHA5 p.V593L 4 66270108 66270108 CAOV3_OVARY 37 Missense_Mutation SNP C G uc011cah.1 EPHA5_uc003hcx.... Hybrid_Cap... view
EPHA6 3 97367230 97367231 CAOV3_OVARY 37 Intron Ins - A rs115253553 uc010how.1 EPHA6_uc003drs.... Hybrid_Cap...
EPHB6 7 142568771 142568771 CAOV3_OVARY 37 3'UTR Del C - uc011kst.1 EPHB6_uc011ksu.... Hybrid_Cap...
ESR2 p.T476K 14 64694312 64694312 CAOV3_OVARY 37 Missense_Mutation SNP G T uc001xgu.2 ESR2_uc001xgv.2... Hybrid_Cap... view
FGFR1OP 6 167453519 167453520 CAOV3_OVARY 37 3'UTR Ins - T rs115519488 uc003qvj.2 CCR6_uc003qvl.2... Hybrid_Cap...
FGFR3 4 1809128 1809129 CAOV3_OVARY 37 3'UTR Del GT - uc003gdu.2 FGFR3_uc003gdr.... Hybrid_Cap...
FLI1 11 128638217 128638217 CAOV3_OVARY 37 Intron Del G - uc010sbu.1 FLI1_uc010sbt.1... Hybrid_Cap...
FN1 2 216244182 216244185 CAOV3_OVARY 37 Intron Del GTAC - uc002vfa.2 FN1_uc002vfb.2_... Hybrid_Cap...
FOXO4 p.M474I X 70321502 70321502 CAOV3_OVARY 37 Missense_Mutation SNP G A uc004dys.1 FOXO4_uc010nkz.... Hybrid_Cap... view
GPHN 14 66975120 66975120 CAOV3_OVARY 37 5'UTR SNP C T uc010tss.1 GPHN_uc001xiw.2... Hybrid_Cap... view
GRIA3 X 122318386 122318387 CAOV3_OVARY 37 Splice_Site_Ins Ins - G rs66632982 uc004etq.3 GRIA3_uc004etr.... Hybrid_Cap...
GRK4 4 2965713 2965713 CAOV3_OVARY 37 5'UTR SNP C A uc003ggn.1 GRK4_uc003ggo.1... Hybrid_Cap... view
GUCY2C 12 14827464 14827466 CAOV3_OVARY 37 Intron Del ATC - rs72525754;rs3083879 uc001rcd.2 GUCY2C_uc009zhz... Hybrid_Cap...
HNF1A 12 121434630 121434631 CAOV3_OVARY 37 Intron Ins - TCATTCAT rs75100977 uc010szn.1 HNF1A_uc001tze.... Hybrid_Cap...
HNRNPH1 p.P144R 5 179046375 179046375 CAOV3_OVARY 37 Missense_Mutation SNP G C uc003mkf.3 HNRNPH1_uc011dg... Hybrid_Cap... view
ILK 11 6630029 6630029 CAOV3_OVARY 37 Intron Del C - uc001mee.2 ILK_uc001mef.2_... Hybrid_Cap...
KIAA2022 p.V904F X 73961682 73961682 CAOV3_OVARY 37 Missense_Mutation SNP C A uc004eby.2 Hybrid_Cap... view
KLK7 19 51480672 51480675 CAOV3_OVARY 37 3'UTR Del GGTT - uc002puo.2 KLK7_uc002pup.2... Hybrid_Cap...
LRP1B p.V3659M 2 141128312 141128312 CAOV3_OVARY 37 Missense_Mutation SNP C T uc002tvj.1 Hybrid_Cap... view
LRP1B p.Q859L 2 141751632 141751632 CAOV3_OVARY 37 Missense_Mutation SNP T A uc002tvj.1 LRP1B_uc010fnl.... Hybrid_Cap... view
MAML3 p.Q767_splice 4 140651585 140651587 CAOV3_OVARY 37 Splice_Site_Del Del CTG - uc003ihz.1 MGST2_uc010ioi.... Hybrid_Cap...
MAP2K1 15 66679649 66679650 CAOV3_OVARY 37 5'UTR Ins - C rs67229745 uc010bhq.2 Hybrid_Cap...
MAP3K1 p.T949del 5 56177849 56177851 CAOV3_OVARY 37 In_Frame_Del Del CAA - uc003jqw.3 Hybrid_Cap...
MAP3K14 p.R218_splice 17 43364293 43364294 CAOV3_OVARY 37 Splice_Site_Ins Ins - G rs66766023 uc002iiw.1 MAP3K14_uc010da... Hybrid_Cap...
MAPKAPK3 3 50685575 50685575 CAOV3_OVARY 37 3'UTR Del A - rs76026164 uc003day.1 MAPKAPK3_uc003d... Hybrid_Cap...
MLLT4 p.R250R 6 168281053 168281053 CAOV3_OVARY 37 Silent SNP A G uc003qwd.2 MLLT4_uc003qwb.... Hybrid_Cap... view
MLLT6 17 36881873 36881873 CAOV3_OVARY 37 3'UTR Del C - uc002hqi.3 MLLT6_uc002hqk.... Hybrid_Cap...
MTMR11 p.G709W 1 149901026 149901026 CAOV3_OVARY 37 Missense_Mutation SNP C A uc001etl.3 SF3B4_uc001etj.... Hybrid_Cap... view
MYCN p.R384S 2 16085976 16085976 CAOV3_OVARY 37 Missense_Mutation SNP A C uc002rci.2 MYCN_uc010yjr.1... Hybrid_Cap... view
NCAM1 11 112832307 112832308 CAOV3_OVARY 37 5'UTR Ins - A rs117108942 uc009yyq.1 NCAM1_uc001pno.... Hybrid_Cap...
NCAM1 11 112832340 112832340 CAOV3_OVARY 37 5'UTR Del C - uc009yyq.1 NCAM1_uc001pno.... Hybrid_Cap...
NEK3 p.K313_splice 13 52718050 52718051 CAOV3_OVARY 37 Splice_Site_Ins Ins - T rs72514762 uc001vgh.2 NEK3_uc001vgg.2... Hybrid_Cap...
NPM1 5 170837734 170837734 CAOV3_OVARY 37 3'UTR Del T - uc011dex.1 NPM1_uc003mbi.2... Hybrid_Cap...
NPR1 1 153665919 153665920 CAOV3_OVARY 37 3'UTR Ins - C rs66682713 uc001fcs.3 NPR1_uc010pdz.1... Hybrid_Cap...
NR1H2 p.176_177insQ 19 50881820 50881821 CAOV3_OVARY 37 In_Frame_Ins Ins - AAC rs66783852;rs112359270 uc010enw.2 NR1H2_uc002prv.... Hybrid_Cap...
NUMA1 p.A2091G 11 71714997 71714997 CAOV3_OVARY 37 Missense_Mutation SNP G C uc001orl.1 IL18BP_uc009ysu... Hybrid_Cap... view
NYNRIN p.T854M 14 24880575 24880575 CAOV3_OVARY 37 Missense_Mutation SNP C T uc001wpf.3 Hybrid_Cap... view
PAX3 2 223158653 223158653 CAOV3_OVARY 37 Intron Del T - rs112753212 uc002vmt.1 PAX3_uc002vmy.1... Hybrid_Cap...
PDK1 p.Q178* 2 173429292 173429292 CAOV3_OVARY 37 Nonsense_Mutation SNP C T uc002uhq.1 PDK1_uc010zdz.1... Hybrid_Cap... view
PER1 p.Q314R 17 8052069 8052069 CAOV3_OVARY 37 Missense_Mutation SNP T C uc002gkd.2 PER1_uc010vuq.1... Hybrid_Cap... view
PKN2 p.L384del 1 89250482 89250484 CAOV3_OVARY 37 In_Frame_Del Del TCT - uc001dmn.2 PKN2_uc001dmm.1... Hybrid_Cap...
PML 15 74328373 74328373 CAOV3_OVARY 37 Intron SNP C T uc002awv.2 PML_uc002awm.2_... Hybrid_Cap... view
PMS1 2 190670539 190670540 CAOV3_OVARY 37 Intron Ins - A rs3214425 uc002urh.3 PMS1_uc010zga.1... Hybrid_Cap...
PRKDC p.L1244fs 8 48805816 48805817 CAOV3_OVARY 37 Frame_Shift_Ins Ins - G rs67588121 uc003xqi.2 PRKDC_uc003xqj.... Hybrid_Cap...
RASGRF1 15 79277150 79277151 CAOV3_OVARY 37 Intron Ins - C rs67045840;rs77640668 uc002beq.2 RASGRF1_uc002be... Hybrid_Cap...
RECQL4 p.R766fs 8 145738768 145738768 CAOV3_OVARY 37 Frame_Shift_Del Del G - uc003zdj.2 Hybrid_Cap...
SLC22A15 p.G81S 1 116534805 116534805 CAOV3_OVARY 37 Missense_Mutation SNP G A uc001egb.3 SLC22A15_uc001e... Hybrid_Cap... view
SMURF1 p.R211Q 7 98649917 98649917 CAOV3_OVARY 37 Missense_Mutation SNP C T uc003upu.1 SMURF1_uc003upv... Hybrid_Cap... view
STAT1 2 191840353 191840353 CAOV3_OVARY 37 Intron Del T - uc002usj.2 STAT1_uc010fse.... Hybrid_Cap...
STAT5A 17 40458145 40458145 CAOV3_OVARY 37 Intron SNP C T uc002hzj.1 STAT5A_uc010cya... Hybrid_Cap... view
STK25 2 242435659 242435662 CAOV3_OVARY 37 Intron Del AAGG - rs3215138;rs75497042 uc002wbm.2 STK25_uc002wbk.... Hybrid_Cap...
TCF21 6 134210497 134210498 CAOV3_OVARY 37 5'UTR Ins - TCTC rs35199378 uc003qei.3 TCF21_uc003qej.... Hybrid_Cap...
TLE1 9 84202837 84202838 CAOV3_OVARY 37 Intron Ins - TGTCATCCCGCC rs5898748 uc004alz.2 TLE1_uc004aly.2... Hybrid_Cap...
TLK1 2 171850178 171850179 CAOV3_OVARY 37 3'UTR Ins - AA rs71008739 uc002ugo.2 TLK1_uc002ugn.2... Hybrid_Cap...
TNRC6B p.R1395C 22 40704578 40704578 CAOV3_OVARY 37 Missense_Mutation SNP C T uc011aor.1 TNRC6B_uc003aym... Hybrid_Cap... view
TP53 p.Q136* 17 7578524 7578524 CAOV3_OVARY 37 Nonsense_Mutation SNP G A uc002gim.2 TP53_uc002gig.1... Hybrid_Cap... view
TRPS1 8 116635872 116635873 CAOV3_OVARY 37 5'UTR Ins - A rs76893349 uc003yny.2 TRPS1_uc011lhy.... Hybrid_Cap...
VEGFC p.S419_splice 4 177605082 177605084 CAOV3_OVARY 37 Splice_Site_Del Del TCA - uc003ius.1 Hybrid_Cap...