Annotation Summary for Cell Line: Capan-2  

Cell line primary name: Capan-2
Cell line aliases:
Gender: M
Site Primary: pancreas
Histology: carcinoma
Hist Subtype1: ductal_carcinoma
Notes:
Source: ATCC
Expression arrays: METIS_p_NCLE_RNA1_Human_U133_Plus_2.0_B09_240890
SNP arrays: ARLES_p_NCLE_DNAAffy2_S_GenomeWideSNP_6_C04_256056
Oncomap: yes
Hybrid Capture Sequencing: yes


Mutations in Capan-2

GeneProtein
Change
ChrStartEnd SampleNCBI
Build
Variant
Classification
Variant TypeReference
Allele
Tumor
Allele 1
dbSNP IDAnnotation
Transcript
Other
Transcripts
Method View
Reads
Mutation
Assessor
ABL1 p.G1079D 9 133760856 133760856 CAPAN2_PANCREAS 37 Missense_Mutation SNP G A uc004bzv.2 ABL1_uc004bzw.2... Hybrid_Cap... view
ADAM17 2 9630245 9630245 CAPAN2_PANCREAS 37 3'UTR Del T - uc002qzu.2 IAH1_uc010yiz.1... Hybrid_Cap...
ADAM28 8 24211994 24211997 CAPAN2_PANCREAS 37 3'UTR Del CTAT - rs10610134 uc003xdy.2 ADAM28_uc011laa... Hybrid_Cap...
AKAP12 p.1531_1532insE 6 151674116 151674117 CAPAN2_PANCREAS 37 In_Frame_Ins Ins - GAG rs34737819 uc011eep.1 AKAP12_uc003qoe... Hybrid_Cap...
ALPK2 p.1388_1389FF>F 18 56203253 56203255 CAPAN2_PANCREAS 37 In_Frame_Del Del AAG - uc002lhj.3 ALPK2_uc002lhk.... Hybrid_Cap...
ASTN1 p.M1068I 1 176853497 176853497 CAPAN2_PANCREAS 37 Missense_Mutation SNP C A uc001glc.2 ASTN1_uc001glb.... Hybrid_Cap... view
BCL3 19 45262965 45262968 CAPAN2_PANCREAS 37 3'UTR Del CCCC - uc010xxe.1 Hybrid_Cap...
BCR 22 23631813 23631814 CAPAN2_PANCREAS 37 Intron Ins - C rs66503844 uc002zww.2 BCR_uc002zwx.2_... Hybrid_Cap...
CABC1 1 227171585 227171585 CAPAN2_PANCREAS 37 Intron Del T - uc001hqm.1 CABC1_uc001hqn.... Hybrid_Cap...
CACNB2 10 18828721 18828722 CAPAN2_PANCREAS 37 3'UTR Ins - AA rs3841459 uc001ipr.2 CACNB2_uc009xjz... Hybrid_Cap...
CAMK2A 5 149602223 149602224 CAPAN2_PANCREAS 37 3'UTR Del AC - uc003lrt.2 CAMK2A_uc003lrs... Hybrid_Cap...
CDK11B 1 1654066 1654068 CAPAN2_PANCREAS 37 Intron Del GCG - uc001agv.1 CDK11B_uc001aha... Hybrid_Cap...
CDK14 7 90338781 90338781 CAPAN2_PANCREAS 37 Intron SNP C A uc003uky.2 CDK14_uc003ukt.... Hybrid_Cap... view
CLTCL1 p.V1201_splice 22 19189003 19189004 CAPAN2_PANCREAS 37 Splice_Site_Ins Ins - C rs11386977 uc002zpb.2 CLTCL1_uc011agv... Hybrid_Cap...
CLTCL1 22 19196673 19196674 CAPAN2_PANCREAS 37 Intron Ins - A uc002zpb.2 CLTCL1_uc011agv... Hybrid_Cap...
CREB3L2 p.T100del 7 137612914 137612916 CAPAN2_PANCREAS 37 In_Frame_Del Del TGG - uc003vtw.2 CREB3L2_uc003vt... Hybrid_Cap...
CTDSPL p.H200Y 3 38017278 38017278 CAPAN2_PANCREAS 37 Missense_Mutation SNP C T uc003chg.2 CTDSPL_uc003chh... Hybrid_Cap... view
CUBN p.S2228Y 10 16962100 16962100 CAPAN2_PANCREAS 37 Missense_Mutation SNP G T uc001ioo.2 Hybrid_Cap... view
CXCL12 10 44873992 44873993 CAPAN2_PANCREAS 37 Intron Ins - CT rs117617571 uc001jbh.2 CXCL12_uc001jbf... Hybrid_Cap...
EPHA6 3 97367230 97367231 CAPAN2_PANCREAS 37 Intron Ins - A rs115253553 uc010how.1 EPHA6_uc003drs.... Hybrid_Cap...
ERCC2 19 45873825 45873825 CAPAN2_PANCREAS 37 5'UTR SNP T C uc002pbj.2 ERCC2_uc010ejz.... Hybrid_Cap... view
ETV1 7 14028708 14028708 CAPAN2_PANCREAS 37 5'UTR Del A - rs77190713 uc011jxq.1 ETV1_uc011jxn.1... Hybrid_Cap...
FANCC p.E521K 9 97864105 97864105 CAPAN2_PANCREAS 37 Missense_Mutation SNP C T uc004avh.2 Hybrid_Cap... view
FBN2 p.M631V 5 127712505 127712505 CAPAN2_PANCREAS 37 Missense_Mutation SNP T C uc003kuu.2 FBN2_uc003kuv.2... Hybrid_Cap... view
FGFR1OP 6 167453519 167453520 CAPAN2_PANCREAS 37 3'UTR Ins - T rs115519488 uc003qvj.2 CCR6_uc003qvl.2... Hybrid_Cap...
FGFR3 4 1809128 1809129 CAPAN2_PANCREAS 37 3'UTR Del GT - uc003gdu.2 FGFR3_uc003gdr.... Hybrid_Cap...
FLI1 11 128638217 128638217 CAPAN2_PANCREAS 37 Intron Del G - uc010sbu.1 FLI1_uc010sbt.1... Hybrid_Cap...
FN1 2 216244182 216244185 CAPAN2_PANCREAS 37 Intron Del GTAC - uc002vfa.2 FN1_uc002vfb.2_... Hybrid_Cap...
GRIA3 X 122318386 122318387 CAPAN2_PANCREAS 37 Splice_Site_Ins Ins - G rs66632982 uc004etq.3 GRIA3_uc004etr.... Hybrid_Cap...
GUCY2C 12 14827464 14827466 CAPAN2_PANCREAS 37 Intron Del ATC - rs72525754;rs3083879 uc001rcd.2 GUCY2C_uc009zhz... Hybrid_Cap...
HECW1 p.S789Y 7 43485137 43485137 CAPAN2_PANCREAS 37 Missense_Mutation SNP C A uc003tid.1 HECW1_uc011kbi.... Hybrid_Cap... view
HIF1A 14 62213929 62213930 CAPAN2_PANCREAS 37 3'UTR Ins - T rs67890419 uc001xfs.2 HIF1A_uc001xfq.... Hybrid_Cap...
IGF1R 15 99192755 99192763 CAPAN2_PANCREAS 37 5'UTR Del TTTTT... - uc002bul.2 IGF1R_uc010urq.... Hybrid_Cap...
ILK 11 6630029 6630029 CAPAN2_PANCREAS 37 Intron Del C - uc001mee.2 ILK_uc001mef.2_... Hybrid_Cap...
KLK7 19 51480672 51480675 CAPAN2_PANCREAS 37 3'UTR Del GGTT - uc002puo.2 KLK7_uc002pup.2... Hybrid_Cap...
KRAS p.G12V 12 25398284 25398284 CAPAN2_PANCREAS 37 Missense_Mutation SNP C A uc001rgp.1 KRAS_uc001rgq.1... Hybrid_Cap... view
LRRK2 p.N202Y 12 40634317 40634317 CAPAN2_PANCREAS 37 Missense_Mutation SNP A T uc001rmg.3 Hybrid_Cap... view
MAF 16 79628537 79628537 CAPAN2_PANCREAS 37 Intron Del T - uc002ffm.2 MAF_uc002ffn.2_... Hybrid_Cap...
MAML3 p.Q767_splice 4 140651585 140651587 CAPAN2_PANCREAS 37 Splice_Site_Del Del CTG - uc003ihz.1 MGST2_uc010ioi.... Hybrid_Cap...
MAP3K1 p.T949del 5 56177849 56177851 CAPAN2_PANCREAS 37 In_Frame_Del Del CAA - uc003jqw.3 Hybrid_Cap...
MLL3 p.Y816fs 7 151945071 151945072 CAPAN2_PANCREAS 37 Frame_Shift_Ins Ins - T uc003wla.2 Hybrid_Cap...
MYLK 3 123332875 123332876 CAPAN2_PANCREAS 37 3'UTR Ins - T rs35930843;rs115544676 uc003ego.2 MYLK_uc003egl.2... Hybrid_Cap...
NCAM1 11 112832307 112832308 CAPAN2_PANCREAS 37 5'UTR Ins - A rs117108942 uc009yyq.1 NCAM1_uc001pno.... Hybrid_Cap...
NCAM1 11 112832340 112832340 CAPAN2_PANCREAS 37 5'UTR Del C - uc009yyq.1 NCAM1_uc001pno.... Hybrid_Cap...
NEK3 p.K313_splice 13 52718050 52718051 CAPAN2_PANCREAS 37 Splice_Site_Ins Ins - T rs72514762 uc001vgh.2 NEK3_uc001vgg.2... Hybrid_Cap...
NKD2 p.A157T 5 1034913 1034913 CAPAN2_PANCREAS 37 Missense_Mutation SNP G A uc003jbt.1 NKD2_uc010itf.1... Hybrid_Cap... view
NOTCH4 p.15_16LL>L 6 32191659 32191661 CAPAN2_PANCREAS 37 In_Frame_Del Del AGC - uc003obb.2 NOTCH4_uc011dpu... Hybrid_Cap...
NPM1 5 170837734 170837734 CAPAN2_PANCREAS 37 3'UTR Del T - uc011dex.1 NPM1_uc003mbi.2... Hybrid_Cap...
NPR1 1 153665919 153665920 CAPAN2_PANCREAS 37 3'UTR Ins - C rs66682713 uc001fcs.3 NPR1_uc010pdz.1... Hybrid_Cap...
NR1H2 p.176_177insQ 19 50881820 50881821 CAPAN2_PANCREAS 37 In_Frame_Ins Ins - AAC rs66783852;rs112359270 uc010enw.2 NR1H2_uc002prv.... Hybrid_Cap...
OBSCN p.S7894fs 1 228566074 228566075 CAPAN2_PANCREAS 37 Frame_Shift_Ins Ins - G uc009xez.1 OBSCN_uc001hsr.... Hybrid_Cap...
PAX3 2 223158653 223158653 CAPAN2_PANCREAS 37 Intron Del T - rs112753212 uc002vmt.1 PAX3_uc002vmy.1... Hybrid_Cap...
PCDH15 10 55581364 55581364 CAPAN2_PANCREAS 37 3'UTR SNP A C uc010qhy.1 PCDH15_uc010qhq... Hybrid_Cap... view
PGR 11 100933598 100933599 CAPAN2_PANCREAS 37 Intron Ins - AATGA rs35148438 uc001pgh.2 PGR_uc001pgg.2_... Hybrid_Cap...
PIK3C2G p.P129del 12 18435399 18435401 CAPAN2_PANCREAS 37 In_Frame_Del Del CCC - uc010sib.1 PIK3C2G_uc001rd... Hybrid_Cap...
PPP1R3A 7 113517647 113517647 CAPAN2_PANCREAS 37 3'UTR SNP G A uc010ljy.1 Hybrid_Cap... view
PRKDC p.L1244fs 8 48805816 48805817 CAPAN2_PANCREAS 37 Frame_Shift_Ins Ins - G rs67588121 uc003xqi.2 PRKDC_uc003xqj.... Hybrid_Cap...
PRKG1 10 54053913 54053914 CAPAN2_PANCREAS 37 3'UTR Ins - G rs35902208 uc001jjo.2 PRKG1_uc001jjm.... Hybrid_Cap...
RANBP17 p.K826N 5 170667987 170667987 CAPAN2_PANCREAS 37 Missense_Mutation SNP A C uc003mba.2 RANBP17_uc003mb... Hybrid_Cap... view
RANBP9 p.N578S 6 13634725 13634725 CAPAN2_PANCREAS 37 Missense_Mutation SNP T C uc003nbb.2 RANBP9_uc003nba... Hybrid_Cap... view
RB1 13 49054379 49054379 CAPAN2_PANCREAS 37 3'UTR SNP G A uc001vcb.2 Hybrid_Cap... view
RECQL4 p.R766fs 8 145738768 145738768 CAPAN2_PANCREAS 37 Frame_Shift_Del Del G - uc003zdj.2 Hybrid_Cap...
RIMS2 p.R1234G 8 105261771 105261771 CAPAN2_PANCREAS 37 Missense_Mutation SNP C G uc003yls.2 RIMS2_uc003ylp.... Hybrid_Cap... view
SACS p.E4213fs 13 23905377 23905378 CAPAN2_PANCREAS 37 Frame_Shift_Del Del TC - uc001uon.2 SACS_uc001uoo.2... Hybrid_Cap...
SEPT9 17 75494787 75494788 CAPAN2_PANCREAS 37 3'UTR Ins - C rs5822173 uc002jts.3 SEPT9_uc010wtk.... Hybrid_Cap...
SLC6A8 X 152957656 152957657 CAPAN2_PANCREAS 37 Intron Ins - A uc004fib.3 SLC6A8_uc004fic... Hybrid_Cap...
STAT5A 17 40462797 40462800 CAPAN2_PANCREAS 37 3'UTR Del TGTG - uc002hzj.1 STAT5A_uc010cya... Hybrid_Cap...
STK25 2 242435659 242435662 CAPAN2_PANCREAS 37 Intron Del AAGG - rs3215138;rs75497042 uc002wbm.2 STK25_uc002wbk.... Hybrid_Cap...
STK31 7 23872024 23872025 CAPAN2_PANCREAS 37 3'UTR Ins - TTTG rs66787534 uc003sws.3 STK31_uc003swt.... Hybrid_Cap...
TCERG1L p.P266L 10 133058581 133058581 CAPAN2_PANCREAS 37 Missense_Mutation SNP G A uc001lkp.2 TCERG1L_uc009ya... Hybrid_Cap... view
TEC 4 48139307 48139310 CAPAN2_PANCREAS 37 3'UTR Del TTAT - rs79098351 uc003gxz.2 Hybrid_Cap...
TMEM123 11 102269398 102269398 CAPAN2_PANCREAS 37 3'UTR Del G - uc001pha.2 TMEM123_uc009yx... Hybrid_Cap...
TNN p.G1132D 1 175105045 175105045 CAPAN2_PANCREAS 37 Missense_Mutation SNP G A uc001gkl.1 Hybrid_Cap... view
TPR p.T1503R 1 186305825 186305825 CAPAN2_PANCREAS 37 Missense_Mutation SNP G C uc001grv.2 Hybrid_Cap... view
TRIM67 1 231351203 231351203 CAPAN2_PANCREAS 37 3'UTR SNP C T uc009xfn.1 Hybrid_Cap... view
TSC2 16 2138671 2138672 CAPAN2_PANCREAS 37 3'UTR Del AA - uc002con.2 TSC2_uc010bsd.2... Hybrid_Cap...
VEGFC p.S419_splice 4 177605082 177605084 CAPAN2_PANCREAS 37 Splice_Site_Del Del TCA - uc003ius.1 Hybrid_Cap...