Annotation Summary for Cell Line: DBTRG-05MG  

Cell line primary name: DBTRG-05MG
Cell line aliases:
Gender: F
Site Primary: central_nervous_system
Histology: glioma
Hist Subtype1: astrocytoma_Grade_IV
Notes:
Source: ATCC
Expression arrays: METIS_p_NCLE_RNA1_Human_U133_Plus_2.0_F10_240988
SNP arrays: ARLES_p_NCLE_DNAAffy2_S_GenomeWideSNP_6_A06_256012
Oncomap: yes
Hybrid Capture Sequencing: yes


Mutations in DBTRG-05MG

GeneProtein
Change
ChrStartEnd SampleNCBI
Build
Variant
Classification
Variant TypeReference
Allele
Tumor
Allele 1
dbSNP IDAnnotation
Transcript
Other
Transcripts
Method View
Reads
Mutation
Assessor
ABCC3 17 48757026 48757026 DBTRG05MG_CENTR... 37 Intron SNP C T uc002isl.2 ABCC3_uc002isn.... Hybrid_Cap... view
ADAM17 2 9630245 9630245 DBTRG05MG_CENTR... 37 3'UTR Del T - uc002qzu.2 IAH1_uc010yiz.1... Hybrid_Cap...
ADAM28 8 24211994 24211997 DBTRG05MG_CENTR... 37 3'UTR Del CTAT - rs10610134 uc003xdy.2 ADAM28_uc011laa... Hybrid_Cap...
AKAP12 p.1531_1532insE 6 151674116 151674117 DBTRG05MG_CENTR... 37 In_Frame_Ins Ins - GAG rs34737819 uc011eep.1 AKAP12_uc003qoe... Hybrid_Cap...
ASPH p.A264_splice 8 62550924 62550925 DBTRG05MG_CENTR... 37 Splice_Site_Ins Ins - A rs5891816 uc003xuj.2 ASPH_uc011leg.1... Hybrid_Cap...
AURKC 19 57742494 57742507 DBTRG05MG_CENTR... 37 5'UTR Del GGACG... - rs67926438;rs112039303;rs59094959 uc002qoe.2 AURKC_uc002qoc.... Hybrid_Cap...
BCR 22 23632448 23632448 DBTRG05MG_CENTR... 37 Intron SNP T C uc002zww.2 BCR_uc002zwx.2_... Hybrid_Cap... view
BRAF p.V600E 7 140453136 140453136 DBTRG05MG_CENTR... 37 Missense_Mutation SNP A T rs113488022 uc003vwc.3 Hybrid_Cap... view
BTG1 12 92537706 92537707 DBTRG05MG_CENTR... 37 3'UTR Ins - TT rs33983967 uc001tby.3 BTG1_uc001tbv.1... Hybrid_Cap...
CACNB2 10 18828721 18828722 DBTRG05MG_CENTR... 37 3'UTR Ins - AA rs3841459 uc001ipr.2 CACNB2_uc009xjz... Hybrid_Cap...
CASP3 p.I160F 4 185552924 185552924 DBTRG05MG_CENTR... 37 Missense_Mutation SNP T A uc003iwh.2 CASP3_uc003iwg.... Hybrid_Cap... view
CCNE1 19 30314735 30314735 DBTRG05MG_CENTR... 37 3'UTR SNP C T uc002nsn.2 CCNE1_uc002nso.... Hybrid_Cap... view
CDK13 p.A487S 7 40027445 40027445 DBTRG05MG_CENTR... 37 Missense_Mutation SNP G T rs34910103 uc003thh.3 CDK13_uc003thi.... Hybrid_Cap... view
CHD1 p.P1684del 5 98192165 98192167 DBTRG05MG_CENTR... 37 In_Frame_Del Del AGG - rs79267787;rs61749618 uc003knf.2 CHD1_uc010jbn.2... Hybrid_Cap...
CHD1 p.S1137I 5 98210806 98210806 DBTRG05MG_CENTR... 37 Missense_Mutation SNP C A uc003knf.2 CHD1_uc010jbn.2... Hybrid_Cap... view
CLTCL1 p.V1201_splice 22 19189003 19189004 DBTRG05MG_CENTR... 37 Splice_Site_Ins Ins - C rs11386977 uc002zpb.2 CLTCL1_uc011agv... Hybrid_Cap...
CSF2 5 131411566 131411566 DBTRG05MG_CENTR... 37 3'UTR SNP C T uc003kwf.2 Hybrid_Cap... view
CYSLTR2 13 49282033 49282033 DBTRG05MG_CENTR... 37 3'UTR SNP C T uc010acx.1 CYSLTR2_uc010ac... Hybrid_Cap... view
DAPK1 p.I168F 9 90254347 90254347 DBTRG05MG_CENTR... 37 Missense_Mutation SNP A T uc004apc.2 DAPK1_uc004ape.... Hybrid_Cap... view
EGFR 7 55238164 55238164 DBTRG05MG_CENTR... 37 Intron SNP G T uc003tqk.2 EGFR_uc003tqj.2... Hybrid_Cap... view
EP300 22 41574970 41574972 DBTRG05MG_CENTR... 37 3'UTR Del GTA - rs76489032 uc003azl.3 Hybrid_Cap...
EPHA6 3 97367230 97367231 DBTRG05MG_CENTR... 37 Intron Ins - A rs115253553 uc010how.1 EPHA6_uc003drs.... Hybrid_Cap...
EPHA6 3 97467610 97467611 DBTRG05MG_CENTR... 37 3'UTR Ins - CT uc010how.1 Hybrid_Cap...
EPHB6 p.S359S 7 142563360 142563360 DBTRG05MG_CENTR... 37 Silent SNP C T uc011kst.1 EPHB6_uc011ksu.... Hybrid_Cap... view
F8 p.S1144I X 154158634 154158634 DBTRG05MG_CENTR... 37 Missense_Mutation SNP C A uc004fmt.2 Hybrid_Cap... view
F8 p.A119P X 154225281 154225281 DBTRG05MG_CENTR... 37 Missense_Mutation SNP C G uc004fmt.2 F8_uc011mzx.1_M... Hybrid_Cap... view
FGFR1 p.D768N 8 38271313 38271313 DBTRG05MG_CENTR... 37 Missense_Mutation SNP C T uc003xlp.2 FGFR1_uc010lwf.... Hybrid_Cap... view
FGFR1OP 6 167453519 167453520 DBTRG05MG_CENTR... 37 3'UTR Ins - T rs115519488 uc003qvj.2 CCR6_uc003qvl.2... Hybrid_Cap...
FGFR3 4 1809128 1809129 DBTRG05MG_CENTR... 37 3'UTR Del GT - uc003gdu.2 FGFR3_uc003gdr.... Hybrid_Cap...
FLI1 11 128638217 128638217 DBTRG05MG_CENTR... 37 Intron Del G - uc010sbu.1 FLI1_uc010sbt.1... Hybrid_Cap...
FN1 2 216244182 216244185 DBTRG05MG_CENTR... 37 Intron Del GTAC - uc002vfa.2 FN1_uc002vfb.2_... Hybrid_Cap...
FOXE1 9 100617450 100617450 DBTRG05MG_CENTR... 37 3'UTR SNP C T uc004axu.2 Hybrid_Cap... view
FSTL3 p.G43C 19 677815 677815 DBTRG05MG_CENTR... 37 Missense_Mutation SNP G T uc002lpk.1 FSTL3_uc010drt.... Hybrid_Cap... view
GPHN 14 67390932 67390932 DBTRG05MG_CENTR... 37 Intron SNP C T uc010tss.1 GPHN_uc001xiw.2... Hybrid_Cap... view
GRIA3 X 122318386 122318387 DBTRG05MG_CENTR... 37 Splice_Site_Ins Ins - G rs66632982 uc004etq.3 GRIA3_uc004etr.... Hybrid_Cap...
GRK1 p.G213S 13 114322338 114322338 DBTRG05MG_CENTR... 37 Missense_Mutation SNP G A uc010tkf.1 Hybrid_Cap... view
GUCY2C 12 14827464 14827466 DBTRG05MG_CENTR... 37 Intron Del ATC - rs72525754;rs3083879 uc001rcd.2 GUCY2C_uc009zhz... Hybrid_Cap...
HIPK3 p.V1102A 11 33374771 33374771 DBTRG05MG_CENTR... 37 Missense_Mutation SNP T C uc001mul.1 HIPK3_uc001mum.... Hybrid_Cap... view
HNF1A 12 121434630 121434631 DBTRG05MG_CENTR... 37 Intron Ins - TCATTCAT rs75100977 uc010szn.1 HNF1A_uc001tze.... Hybrid_Cap...
HOXA11 7 27222266 27222266 DBTRG05MG_CENTR... 37 3'UTR SNP A T uc003syx.2 HOXA10_uc003syw... Hybrid_Cap... view
ILK 11 6630029 6630029 DBTRG05MG_CENTR... 37 Intron Del C - uc001mee.2 ILK_uc001mef.2_... Hybrid_Cap...
INHBA 7 41729121 41729122 DBTRG05MG_CENTR... 37 3'UTR Ins - T uc003thq.2 INHBA_uc003thr.... Hybrid_Cap...
INHBA 7 41740067 41740068 DBTRG05MG_CENTR... 37 5'UTR Ins - T rs116230303 uc003thq.2 LOC285954_uc003... Hybrid_Cap...
ITPR2 p.R470_splice 12 26834804 26834805 DBTRG05MG_CENTR... 37 Splice_Site_Ins Ins - ACTC rs66696203;rs59199365 uc001rhg.2 Hybrid_Cap...
KIAA1549 p.V1945M 7 138522671 138522671 DBTRG05MG_CENTR... 37 Missense_Mutation SNP C T uc011kql.1 KIAA1549_uc011k... Hybrid_Cap... view
LRGUK 7 133948842 133948842 DBTRG05MG_CENTR... 37 3'UTR SNP G C uc003vrm.1 Hybrid_Cap... view
MAF 16 79628537 79628537 DBTRG05MG_CENTR... 37 Intron Del T - uc002ffm.2 MAF_uc002ffn.2_... Hybrid_Cap...
MAF 16 79628325 79628325 DBTRG05MG_CENTR... 37 3'UTR Del A - uc002ffm.2 MAF_uc002ffn.2_... Hybrid_Cap...
MAK p.Q351* 6 10796323 10796323 DBTRG05MG_CENTR... 37 Nonsense_Mutation SNP G A uc003mzl.2 SYCP2L_uc011dim... Hybrid_Cap... view
MAML2 p.604_607QQQQ>Q 11 95825375 95825383 DBTRG05MG_CENTR... 37 In_Frame_Del Del TGCTG... - rs113349418 uc001pfw.1 Hybrid_Cap...
MAML3 p.Q767_splice 4 140651585 140651587 DBTRG05MG_CENTR... 37 Splice_Site_Del Del CTG - uc003ihz.1 MGST2_uc010ioi.... Hybrid_Cap...
MAP2K1 15 66679649 66679650 DBTRG05MG_CENTR... 37 5'UTR Ins - C rs67229745 uc010bhq.2 Hybrid_Cap...
MAP3K1 p.T949del 5 56177849 56177851 DBTRG05MG_CENTR... 37 In_Frame_Del Del CAA - uc003jqw.3 Hybrid_Cap...
MAP3K14 p.R218_splice 17 43364293 43364294 DBTRG05MG_CENTR... 37 Splice_Site_Ins Ins - G rs66766023 uc002iiw.1 MAP3K14_uc010da... Hybrid_Cap...
MAP3K3 p.L114V 17 61729996 61729996 DBTRG05MG_CENTR... 37 Missense_Mutation SNP C G uc002jbe.2 MAP3K3_uc002jbf... Hybrid_Cap... view
MCM3APAS 21 47671275 47671276 DBTRG05MG_CENTR... 37 3'UTR Ins - AAT rs67797185 uc002zin.2 MCM3APAS_uc002z... Hybrid_Cap...
MECOM p.T417A 3 168834411 168834411 DBTRG05MG_CENTR... 37 Missense_Mutation SNP T C uc011bpj.1 MECOM_uc010hwk.... Hybrid_Cap... view
MLL3 p.Y816fs 7 151945071 151945072 DBTRG05MG_CENTR... 37 Frame_Shift_Ins Ins - T uc003wla.2 Hybrid_Cap...
MSH3 p.63_64insAAP 5 79950724 79950725 DBTRG05MG_CENTR... 37 In_Frame_Ins Ins - CCGCAGCGC rs72432994 uc003kgz.2 DHFR_uc011ctl.1... Hybrid_Cap...
MYO3B p.N460I 2 171243620 171243620 DBTRG05MG_CENTR... 37 Missense_Mutation SNP A T uc002ufy.2 MYO3B_uc002ufv.... Hybrid_Cap... view
MYST4 p.EEEE1083del 10 76781852 76781863 DBTRG05MG_CENTR... 37 In_Frame_Del Del GAGGA... - rs11001248 uc001jwn.1 MYST4_uc001jwm.... Hybrid_Cap...
NCAM1 11 112832307 112832308 DBTRG05MG_CENTR... 37 5'UTR Ins - A rs117108942 uc009yyq.1 NCAM1_uc001pno.... Hybrid_Cap...
NCAM1 11 112832340 112832340 DBTRG05MG_CENTR... 37 5'UTR Del C - uc009yyq.1 NCAM1_uc001pno.... Hybrid_Cap...
NCOA2 p.L52M 8 71126243 71126243 DBTRG05MG_CENTR... 37 Missense_Mutation SNP A T uc003xyn.1 Hybrid_Cap... view
NEK3 p.K313_splice 13 52718050 52718051 DBTRG05MG_CENTR... 37 Splice_Site_Ins Ins - T rs72514762 uc001vgh.2 NEK3_uc001vgg.2... Hybrid_Cap...
NOTCH4 p.740_741NG>KC 6 32181564 32181565 DBTRG05MG_CENTR... 37 Missense_Mutation DNP CA AT uc003obb.2 NOTCH4_uc011dpu... Hybrid_Cap...
NPR1 p.L1052F 1 153665858 153665858 DBTRG05MG_CENTR... 37 Missense_Mutation SNP C T uc001fcs.3 NPR1_uc010pdz.1... Hybrid_Cap... view
NPR1 1 153665919 153665920 DBTRG05MG_CENTR... 37 3'UTR Ins - C rs66682713 uc001fcs.3 NPR1_uc010pdz.1... Hybrid_Cap...
NUP153 p.T1392I 6 17624884 17624884 DBTRG05MG_CENTR... 37 Missense_Mutation SNP G A uc011dje.1 NUP153_uc003ncd... Hybrid_Cap... view
NUP214 9 134067556 134067557 DBTRG05MG_CENTR... 37 Intron Ins - T rs66652901 uc004cag.2 NUP214_uc004cah... Hybrid_Cap...
OBSCN p.E4996K 1 228509528 228509528 DBTRG05MG_CENTR... 37 Missense_Mutation SNP G A uc009xez.1 OBSCN_uc001hsn.... Hybrid_Cap... view
PARP9 3 122254799 122254799 DBTRG05MG_CENTR... 37 Intron SNP T C uc010hri.2 PARP9_uc003eff.... Hybrid_Cap... view
PAX3 2 223158653 223158653 DBTRG05MG_CENTR... 37 Intron Del T - rs112753212 uc002vmt.1 PAX3_uc002vmy.1... Hybrid_Cap...
PCDH15 10 55755221 55755221 DBTRG05MG_CENTR... 37 Intron SNP G T uc010qhy.1 PCDH15_uc010qhq... Hybrid_Cap... view
PDE4DIP p.Q1665fs 1 144873963 144873963 DBTRG05MG_CENTR... 37 Frame_Shift_Del Del T - uc001elw.3 NBPF10_uc009wir... Hybrid_Cap...
PDE4DIP p.V486fs 1 144917828 144917828 DBTRG05MG_CENTR... 37 Frame_Shift_Del Del A - uc001elw.3 NBPF10_uc009wir... Hybrid_Cap...
PDK4 p.T316A 7 95216765 95216765 DBTRG05MG_CENTR... 37 Missense_Mutation SNP T C uc003uoa.2 PDK4_uc003unz.2... Hybrid_Cap... view
PDK4 7 95221928 95221928 DBTRG05MG_CENTR... 37 Intron Del A - uc003uoa.2 PDK4_uc003unz.2... Hybrid_Cap...
PER1 p.P993S 17 8046679 8046679 DBTRG05MG_CENTR... 37 Missense_Mutation SNP G A uc002gkd.2 PER1_uc010cns.2... Hybrid_Cap... view
PIK3C2G p.P129del 12 18435399 18435401 DBTRG05MG_CENTR... 37 In_Frame_Del Del CCC - uc010sib.1 PIK3C2G_uc001rd... Hybrid_Cap...
PLK3 1 45271509 45271509 DBTRG05MG_CENTR... 37 3'UTR SNP T C uc001cmn.2 PLK3_uc001cmo.2... Hybrid_Cap... view
PPP1R3A p.D68E 7 113558848 113558848 DBTRG05MG_CENTR... 37 Missense_Mutation SNP A T uc010ljy.1 Hybrid_Cap... view
PRKDC p.L1244fs 8 48805816 48805817 DBTRG05MG_CENTR... 37 Frame_Shift_Ins Ins - G rs67588121 uc003xqi.2 PRKDC_uc003xqj.... Hybrid_Cap...
PTPN11 p.I172T 12 112891181 112891181 DBTRG05MG_CENTR... 37 Missense_Mutation SNP T C uc001ttx.2 PTPN11_uc001ttw... Hybrid_Cap... view
RALGDS p.V879M 9 135976939 135976939 DBTRG05MG_CENTR... 37 Missense_Mutation SNP C T uc011mcw.1 RALGDS_uc004cct... Hybrid_Cap... view
RANBP17 5 170726003 170726003 DBTRG05MG_CENTR... 37 3'UTR SNP T C uc003mba.2 RANBP17_uc003mb... Hybrid_Cap... view
RECQL4 p.R766fs 8 145738768 145738768 DBTRG05MG_CENTR... 37 Frame_Shift_Del Del G - uc003zdj.2 Hybrid_Cap...
RGL2 6 33261797 33261797 DBTRG05MG_CENTR... 37 Intron SNP G A uc003odv.2 RGL2_uc003odu.2... Hybrid_Cap... view
RGL4 p.V433M 22 24040435 24040435 DBTRG05MG_CENTR... 37 Missense_Mutation SNP G A uc002zxn.2 LOC91316_uc002z... Hybrid_Cap... view
ROS1 p.R2126L 6 117631301 117631301 DBTRG05MG_CENTR... 37 Missense_Mutation SNP C A uc003pxp.1 ROS1_uc011ebi.1... Hybrid_Cap... view
RPS6KA5 14 91360733 91360734 DBTRG05MG_CENTR... 37 Intron Ins - T rs77438853 uc001xys.2 RPS6KA5_uc010tw... Hybrid_Cap...
RPS6KC1 p.S644N 1 213414750 213414750 DBTRG05MG_CENTR... 37 Missense_Mutation SNP G A uc010ptr.1 RPS6KC1_uc001hk... Hybrid_Cap... view
SNX19 p.L533F 11 130784238 130784238 DBTRG05MG_CENTR... 37 Missense_Mutation SNP G A uc001qgk.3 SNX19_uc010sce.... Hybrid_Cap... view
SRMS p.A162S 20 62174828 62174828 DBTRG05MG_CENTR... 37 Missense_Mutation SNP C A uc002yfi.1 Hybrid_Cap... view
STK31 7 23872024 23872025 DBTRG05MG_CENTR... 37 3'UTR Ins - TTTG rs66787534 uc003sws.3 STK31_uc003swt.... Hybrid_Cap...
SULF1 8 70570959 70570959 DBTRG05MG_CENTR... 37 3'UTR SNP C T uc010lza.1 SULF1_uc003xyd.... Hybrid_Cap... view
TGFB2 1 218520038 218520038 DBTRG05MG_CENTR... 37 5'UTR SNP T A uc001hln.2 TGFB2_uc001hll.... Hybrid_Cap... view
TMEM123 11 102269461 102269461 DBTRG05MG_CENTR... 37 3'UTR Del G - uc001pha.2 TMEM123_uc009yx... Hybrid_Cap...
TMPO 12 98909496 98909496 DBTRG05MG_CENTR... 37 5'UTR SNP C G uc001tfh.1 LOC100128191_uc... Hybrid_Cap... view
TOPBP1 p.L1241H 3 133336041 133336041 DBTRG05MG_CENTR... 37 Missense_Mutation SNP A T uc003eps.2 Hybrid_Cap... view
TP63 3 189349218 189349218 DBTRG05MG_CENTR... 37 5'UTR SNP C T uc003fry.2 TP63_uc003frx.2... Hybrid_Cap... view
TP63 3 189507518 189507519 DBTRG05MG_CENTR... 37 Intron Ins - AG rs62702062;rs79714037 uc003fry.2 TP63_uc003frx.2... Hybrid_Cap...
TSC1 p.1043_1044insS 9 135771987 135771988 DBTRG05MG_CENTR... 37 In_Frame_Ins Ins - GCT uc004cca.2 TSC1_uc004ccb.3... Hybrid_Cap...
TTN p.A4284T 2 179597206 179597206 DBTRG05MG_CENTR... 37 Missense_Mutation SNP C T uc010zfg.1 TTN_uc010zfh.1_... Hybrid_Cap... view
ZAP70 2 98351263 98351263 DBTRG05MG_CENTR... 37 Intron SNP T G rs56151201 uc002syd.1 ZAP70_uc010yvf.... Hybrid_Cap... view