Annotation Summary for Cell Line: DB  

Cell line primary name: DB
Cell line aliases:
Gender: M
Site Primary: haematopoietic_and_lymphoid_tissue
Histology: lymphoid_neoplasm
Hist Subtype1: diffuse_large_B_cell_lymphoma
Notes:
Source: ATCC
Expression arrays: CASED_p_NCLE_RNA4_HG-U133_Plus_2_C11_383604
SNP arrays: FASTS_p_NCLE_DNAAffy4_S_GenomeWideSNP_6_G02_335334
Oncomap: yes
Hybrid Capture Sequencing: yes


Mutations in DB

GeneProtein
Change
ChrStartEnd SampleNCBI
Build
Variant
Classification
Variant TypeReference
Allele
Tumor
Allele 1
dbSNP IDAnnotation
Transcript
Other
Transcripts
Method View
Reads
Mutation
Assessor
AAK1 p.541_542QQ>Q 2 69741754 69741756 DB_HAEMATOPOIET... 37 In_Frame_Del Del TGT - rs55712143 uc002sfp.2 AAK1_uc010fdk.2... Hybrid_Cap...
ABCC3 p.L578F 17 48745322 48745322 DB_HAEMATOPOIET... 37 Missense_Mutation SNP A T uc002isl.2 Hybrid_Cap... view
ADAM17 2 9630245 9630245 DB_HAEMATOPOIET... 37 3'UTR Del T - uc002qzu.2 IAH1_uc010yiz.1... Hybrid_Cap...
ADAM28 8 24211994 24211997 DB_HAEMATOPOIET... 37 3'UTR Del CTAT - rs10610134 uc003xdy.2 ADAM28_uc011laa... Hybrid_Cap...
AKAP12 p.1531_1532insE 6 151674116 151674117 DB_HAEMATOPOIET... 37 In_Frame_Ins Ins - GAG rs34737819 uc011eep.1 AKAP12_uc003qoe... Hybrid_Cap...
AKAP9 p.1335_1336insQ 7 91652178 91652179 DB_HAEMATOPOIET... 37 In_Frame_Ins Ins - AAC rs34756483 uc003ulg.2 AKAP9_uc003ule.... Hybrid_Cap...
ALPK1 4 113347609 113347610 DB_HAEMATOPOIET... 37 Intron Ins - T rs68137453 uc003iap.3 ALPK1_uc003ian.... Hybrid_Cap...
ARFGEF1 p.H544L 8 68179619 68179619 DB_HAEMATOPOIET... 37 Missense_Mutation SNP T A uc003xxo.1 ARFGEF1_uc003xx... Hybrid_Cap... view
AURKC 19 57742494 57742507 DB_HAEMATOPOIET... 37 5'UTR Del GGACG... - rs67926438;rs112039303;rs59094959 uc002qoe.2 AURKC_uc002qoc.... Hybrid_Cap...
BCL9 p.P514fs 1 147091501 147091501 DB_HAEMATOPOIET... 37 Frame_Shift_Del Del C - uc001epq.2 BCL9_uc010ozr.1... Hybrid_Cap...
BCR p.E34D 22 23523249 23523249 DB_HAEMATOPOIET... 37 Missense_Mutation SNP G C uc002zww.2 BCR_uc002zwx.2_... Hybrid_Cap... view
CABC1 1 227171585 227171585 DB_HAEMATOPOIET... 37 Intron Del T - uc001hqm.1 CABC1_uc001hqn.... Hybrid_Cap...
CARD10 p.KE272del 22 37906309 37906314 DB_HAEMATOPOIET... 37 In_Frame_Del Del CTCCT... - uc003asx.1 CARD10_uc003ast... Hybrid_Cap...
CLTCL1 p.V1201_splice 22 19189003 19189004 DB_HAEMATOPOIET... 37 Splice_Site_Ins Ins - C rs11386977 uc002zpb.2 CLTCL1_uc011agv... Hybrid_Cap...
CNTN6 3 1339681 1339686 DB_HAEMATOPOIET... 37 Intron Del GTTTT... - uc003boz.2 CNTN6_uc010hbo.... Hybrid_Cap...
CREB3L2 p.T100del 7 137612914 137612916 DB_HAEMATOPOIET... 37 In_Frame_Del Del TGG - uc003vtw.2 CREB3L2_uc003vt... Hybrid_Cap...
EP300 22 41574970 41574972 DB_HAEMATOPOIET... 37 3'UTR Del GTA - rs76489032 uc003azl.3 Hybrid_Cap...
EPHA5 4 66189754 66189754 DB_HAEMATOPOIET... 37 3'UTR Del T - uc011cah.1 EPHA5_uc003hcx.... Hybrid_Cap...
EPHA6 3 97367230 97367231 DB_HAEMATOPOIET... 37 Intron Ins - A rs115253553 uc010how.1 EPHA6_uc003drs.... Hybrid_Cap...
EPHB3 p.V575M 3 184295769 184295769 DB_HAEMATOPOIET... 37 Missense_Mutation SNP G A uc003foz.2 Hybrid_Cap... view
ETV1 7 14028708 14028708 DB_HAEMATOPOIET... 37 5'UTR Del A - rs77190713 uc011jxq.1 ETV1_uc011jxn.1... Hybrid_Cap...
FBN2 p.D2138A 5 127626456 127626456 DB_HAEMATOPOIET... 37 Missense_Mutation SNP T G uc003kuu.2 Hybrid_Cap... view
FGFR1OP 6 167453519 167453520 DB_HAEMATOPOIET... 37 3'UTR Ins - T rs115519488 uc003qvj.2 CCR6_uc003qvl.2... Hybrid_Cap...
FZD1 p.93_94insP 7 90894459 90894460 DB_HAEMATOPOIET... 37 In_Frame_Ins Ins - CCG uc003ula.2 Hybrid_Cap...
GPHN p.G18* 14 66975297 66975297 DB_HAEMATOPOIET... 37 Nonsense_Mutation SNP G T uc010tss.1 GPHN_uc001xiw.2... Hybrid_Cap... view
GPR112 p.F2193Y X 135432443 135432443 DB_HAEMATOPOIET... 37 Missense_Mutation SNP T A uc004ezu.1 GPR112_uc010nsb... Hybrid_Cap... view
GRIA3 X 122318386 122318387 DB_HAEMATOPOIET... 37 Splice_Site_Ins Ins - G rs66632982 uc004etq.3 GRIA3_uc004etr.... Hybrid_Cap...
GUCY2C 12 14827464 14827466 DB_HAEMATOPOIET... 37 Intron Del ATC - rs72525754;rs3083879 uc001rcd.2 GUCY2C_uc009zhz... Hybrid_Cap...
HLF p.S122S 17 53345362 53345362 DB_HAEMATOPOIET... 37 Silent SNP G A uc002iug.1 HLF_uc010dce.1_... Hybrid_Cap... view
HNF1A 12 121434630 121434631 DB_HAEMATOPOIET... 37 Intron Ins - TCATTCAT rs75100977 uc010szn.1 HNF1A_uc001tze.... Hybrid_Cap...
IL1RAP p.A20S 3 190282136 190282136 DB_HAEMATOPOIET... 37 Missense_Mutation SNP G T uc003fsq.2 IL1RAP_uc003fsk... Hybrid_Cap... view
IL1RAP 3 190347361 190347361 DB_HAEMATOPOIET... 37 Intron SNP T C uc003fsq.2 IL1RAP_uc003fsk... Hybrid_Cap... view
ILK 11 6630029 6630029 DB_HAEMATOPOIET... 37 Intron Del C - uc001mee.2 ILK_uc001mef.2_... Hybrid_Cap...
IRS1 p.S686del 2 227661396 227661398 DB_HAEMATOPOIET... 37 In_Frame_Del Del TGC - uc002voh.3 Hybrid_Cap...
KLK7 19 51480672 51480675 DB_HAEMATOPOIET... 37 3'UTR Del GGTT - uc002puo.2 KLK7_uc002pup.2... Hybrid_Cap...
MAF 16 79628537 79628537 DB_HAEMATOPOIET... 37 Intron Del T - uc002ffm.2 MAF_uc002ffn.2_... Hybrid_Cap...
MAML3 p.Q767_splice 4 140651585 140651587 DB_HAEMATOPOIET... 37 Splice_Site_Del Del CTG - uc003ihz.1 MGST2_uc010ioi.... Hybrid_Cap...
MAP3K1 p.T949del 5 56177849 56177851 DB_HAEMATOPOIET... 37 In_Frame_Del Del CAA - uc003jqw.3 Hybrid_Cap...
MAP3K14 p.R218_splice 17 43364293 43364294 DB_HAEMATOPOIET... 37 Splice_Site_Ins Ins - G rs66766023 uc002iiw.1 MAP3K14_uc010da... Hybrid_Cap...
MAP3K3 p.D2D 17 61710042 61710042 DB_HAEMATOPOIET... 37 Silent SNP C T uc002jbe.2 MAP3K3_uc002jbf... Hybrid_Cap... view
MAPKBP1 15 42111753 42111754 DB_HAEMATOPOIET... 37 Intron Ins - C rs3034891 uc001zok.3 MAPKBP1_uc001zo... Hybrid_Cap...
MLLT3 p.156_157SS>S 9 20414374 20414376 DB_HAEMATOPOIET... 37 In_Frame_Del Del CTA - rs1761445 uc003zoe.2 MLLT3_uc011lne.... Hybrid_Cap...
MSI2 17 55709256 55709256 DB_HAEMATOPOIET... 37 Intron SNP C A uc002iuz.1 MSI2_uc010wnm.1... Hybrid_Cap... view
MYLK p.P1098S 3 123419023 123419023 DB_HAEMATOPOIET... 37 Missense_Mutation SNP G A uc003ego.2 MYLK_uc011bjw.1... Hybrid_Cap... view
MYST4 p.E1104del 10 76781906 76781908 DB_HAEMATOPOIET... 37 In_Frame_Del Del GAA - rs79644703 uc001jwn.1 MYST4_uc001jwm.... Hybrid_Cap...
MYST4 10 76790936 76790936 DB_HAEMATOPOIET... 37 3'UTR Del A - uc001jwn.1 MYST4_uc001jwo.... Hybrid_Cap...
NCAM1 11 112832307 112832308 DB_HAEMATOPOIET... 37 5'UTR Ins - A rs117108942 uc009yyq.1 NCAM1_uc001pno.... Hybrid_Cap...
NCAM1 11 112832340 112832340 DB_HAEMATOPOIET... 37 5'UTR Del C - uc009yyq.1 NCAM1_uc001pno.... Hybrid_Cap...
NEK3 p.K313_splice 13 52718050 52718051 DB_HAEMATOPOIET... 37 Splice_Site_Ins Ins - T rs72514762 uc001vgh.2 NEK3_uc001vgg.2... Hybrid_Cap...
NF1 p.I2058V 17 29663677 29663677 DB_HAEMATOPOIET... 37 Missense_Mutation SNP A G uc002hgg.2 NF1_uc002hgh.2_... Hybrid_Cap... view
NFIA 1 61921185 61921186 DB_HAEMATOPOIET... 37 3'UTR Ins - T rs57270124;rs76131997 uc010oos.1 NFIA_uc001czy.2... Hybrid_Cap...
NR1H2 p.176_177insQ 19 50881822 50881823 DB_HAEMATOPOIET... 37 In_Frame_Ins Ins - CAG rs61751954;rs1052533 uc010enw.2 NR1H2_uc002prv.... Hybrid_Cap...
NRK p.K500N X 105153133 105153133 DB_HAEMATOPOIET... 37 Missense_Mutation SNP G T uc004emd.2 NRK_uc010npc.1_... Hybrid_Cap... view
PAX3 2 223158653 223158653 DB_HAEMATOPOIET... 37 Intron Del T - rs112753212 uc002vmt.1 PAX3_uc002vmy.1... Hybrid_Cap...
PCDH15 p.N1533Y 10 55582910 55582910 DB_HAEMATOPOIET... 37 Missense_Mutation SNP T A uc010qhy.1 PCDH15_uc010qhq... Hybrid_Cap... view
PDK4 7 95221928 95221928 DB_HAEMATOPOIET... 37 Intron Del A - uc003uoa.2 PDK4_uc003unz.2... Hybrid_Cap...
PLCG2 16 81954996 81954997 DB_HAEMATOPOIET... 37 Intron Ins - T uc002fgt.2 PLCG2_uc010chg.... Hybrid_Cap...
PREX2 p.G606V 8 68993012 68993012 DB_HAEMATOPOIET... 37 Missense_Mutation SNP G T rs12682458 uc003xxv.1 PREX2_uc003xxu.... Hybrid_Cap... view
PRKD1 p.K268* 14 30108005 30108005 DB_HAEMATOPOIET... 37 Nonsense_Mutation SNP T A uc001wqh.2 Hybrid_Cap... view
PRKDC p.L1244fs 8 48805816 48805817 DB_HAEMATOPOIET... 37 Frame_Shift_Ins Ins - G rs67588121 uc003xqi.2 PRKDC_uc003xqj.... Hybrid_Cap...
PTPRT p.N1144Y 20 40735443 40735443 DB_HAEMATOPOIET... 37 Missense_Mutation SNP T A uc010ggj.2 PTPRT_uc002xkg.... Hybrid_Cap... view
RECQL4 p.R766fs 8 145738768 145738768 DB_HAEMATOPOIET... 37 Frame_Shift_Del Del G - uc003zdj.2 Hybrid_Cap...
RPS6KA5 14 91360733 91360734 DB_HAEMATOPOIET... 37 Intron Ins - T rs77438853 uc001xys.2 RPS6KA5_uc010tw... Hybrid_Cap...
STAT5A 17 40462797 40462798 DB_HAEMATOPOIET... 37 3'UTR Del TG - uc002hzj.1 STAT5A_uc010cya... Hybrid_Cap...
STK24 13 99105294 99105294 DB_HAEMATOPOIET... 37 3'UTR SNP C T uc001vnm.1 STK24_uc001vnn.... Hybrid_Cap... view
STK31 7 23872024 23872025 DB_HAEMATOPOIET... 37 3'UTR Ins - TTTG rs66787534 uc003sws.3 STK31_uc003swt.... Hybrid_Cap...
TAF15 p.R373W 17 34171312 34171312 DB_HAEMATOPOIET... 37 Missense_Mutation SNP A T uc002hkd.2 TAF15_uc010ctw.... Hybrid_Cap... view
TCL6 14 96135758 96135758 DB_HAEMATOPOIET... 37 Intron SNP G A uc001yeq.2 TCL6_uc001yep.1... Hybrid_Cap... view
TEC 4 48139307 48139310 DB_HAEMATOPOIET... 37 3'UTR Del TTAT - rs79098351 uc003gxz.2 Hybrid_Cap...
TLK2 p.L239* 17 60631112 60631112 DB_HAEMATOPOIET... 37 Nonsense_Mutation SNP T A uc010ddp.2 TLK2_uc002izx.3... Hybrid_Cap... view
TNRC6B p.V190L 22 40660802 40660802 DB_HAEMATOPOIET... 37 Missense_Mutation SNP G T uc011aor.1 TNRC6B_uc003aym... Hybrid_Cap... view
TOX3 p.A348V 16 52473825 52473825 DB_HAEMATOPOIET... 37 Missense_Mutation SNP G A uc010vgu.1 TOX3_uc002egw.2... Hybrid_Cap... view
TP53 p.R248* 17 7577538 7577539 DB_HAEMATOPOIET... 37 Nonsense_Mutation DNP CG TA rs11540652 uc002gim.2 TP53_uc002gig.1... Hybrid_Cap...
TRPS1 8 116635872 116635873 DB_HAEMATOPOIET... 37 5'UTR Ins - A rs76893349 uc003yny.2 TRPS1_uc011lhy.... Hybrid_Cap...
TTBK1 p.E771del 6 43250726 43250728 DB_HAEMATOPOIET... 37 In_Frame_Del Del GAA - uc003ouq.1 Hybrid_Cap...
TTN 2 179391639 179391640 DB_HAEMATOPOIET... 37 3'UTR Ins - T rs36037175 uc010zfg.1 TTN_uc010zfh.1_... Hybrid_Cap...
VEGFC p.S419_splice 4 177605082 177605084 DB_HAEMATOPOIET... 37 Splice_Site_Del Del TCA - uc003ius.1 Hybrid_Cap...