Annotation Summary for Cell Line: Daoy  

Cell line primary name: Daoy
Cell line aliases:
Gender: M
Site Primary: central_nervous_system
Histology: primitive_neuroectodermal_tumour-medulloblastoma
Hist Subtype1: NS
Notes:
Source: ATCC
Expression arrays: GILDS_p_NCLE_RNA11_Redo_HG-U133_Plus_2_E09_587618
SNP arrays: FASTS_p_NCLE_DNAAffy4_S_GenomeWideSNP_6_C12_335258
Oncomap: yes
Hybrid Capture Sequencing: yes


Mutations in Daoy

GeneProtein
Change
ChrStartEnd SampleNCBI
Build
Variant
Classification
Variant TypeReference
Allele
Tumor
Allele 1
dbSNP IDAnnotation
Transcript
Other
Transcripts
Method View
Reads
Mutation
Assessor
ABL2 1 179086419 179086420 DAOY_CENTRAL_NE... 37 Intron Ins - A rs72207641 uc001gmj.3 ABL2_uc010pnf.1... Hybrid_Cap...
ACACA 17 35766564 35766564 DAOY_CENTRAL_NE... 37 5'UTR Del A - uc002hno.2 ACACA_uc002hnn.... Hybrid_Cap...
ACOXL p.E116V 2 111556188 111556188 DAOY_CENTRAL_NE... 37 Missense_Mutation SNP A T uc010yxk.1 ACOXL_uc010fkc.... Hybrid_Cap... view
ADAM28 8 24211994 24211997 DAOY_CENTRAL_NE... 37 3'UTR Del CTAT - rs10610134 uc003xdy.2 ADAM28_uc011laa... Hybrid_Cap...
AKAP12 p.1531_1532insE 6 151674116 151674117 DAOY_CENTRAL_NE... 37 In_Frame_Ins Ins - GAG rs34737819 uc011eep.1 AKAP12_uc003qoe... Hybrid_Cap...
AKAP9 p.1335_1336insQ 7 91652178 91652179 DAOY_CENTRAL_NE... 37 In_Frame_Ins Ins - AAC rs34756483 uc003ulg.2 AKAP9_uc003ule.... Hybrid_Cap...
ALPK1 4 113347609 113347610 DAOY_CENTRAL_NE... 37 Intron Ins - T rs68137453 uc003iap.3 ALPK1_uc003ian.... Hybrid_Cap...
ALPK2 p.EDTST1006del 18 56204388 56204402 DAOY_CENTRAL_NE... 37 In_Frame_Del Del CAGTT... - rs60644017;rs117623369 uc002lhj.3 ALPK2_uc002lhk.... Hybrid_Cap...
ATP11A p.E432K 13 113485761 113485761 DAOY_CENTRAL_NE... 37 Missense_Mutation SNP G A uc001vsj.3 ATP11A_uc001vsi... Hybrid_Cap... view
ATRX p.1459_1460EE>E X 76907782 76907784 DAOY_CENTRAL_NE... 37 In_Frame_Del Del TCC - uc004ecp.3 ATRX_uc004ecq.3... Hybrid_Cap...
AXIN1 16 337830 337830 DAOY_CENTRAL_NE... 37 3'UTR SNP G C uc002cgp.1 AXIN1_uc002cgq.... Hybrid_Cap... view
BAI3 p.D1136Y 6 70049343 70049343 DAOY_CENTRAL_NE... 37 Missense_Mutation SNP G T uc003pev.3 BAI3_uc010kak.2... Hybrid_Cap... view
BCL9 1 147096903 147096903 DAOY_CENTRAL_NE... 37 3'UTR SNP A C uc001epq.2 Hybrid_Cap... view
BTG1 12 92537706 92537707 DAOY_CENTRAL_NE... 37 3'UTR Ins - TT rs33983967 uc001tby.3 BTG1_uc001tbv.1... Hybrid_Cap...
CABC1 1 227171585 227171585 DAOY_CENTRAL_NE... 37 Intron Del T - uc001hqm.1 CABC1_uc001hqn.... Hybrid_Cap...
CDK11B 1 1654066 1654068 DAOY_CENTRAL_NE... 37 Intron Del GCG - uc001agv.1 CDK11B_uc001aha... Hybrid_Cap...
CEP110 9 123939699 123939699 DAOY_CENTRAL_NE... 37 3'UTR Del T - rs75910820 uc004bkx.1 CEP110_uc004blb... Hybrid_Cap...
CHD9 p.2164_2165SS>S 16 53338410 53338412 DAOY_CENTRAL_NE... 37 In_Frame_Del Del TTC - uc002ehb.2 CHD9_uc002egy.2... Hybrid_Cap...
CHL1 p.P955H 3 433430 433430 DAOY_CENTRAL_NE... 37 Missense_Mutation SNP C A uc003bot.2 CHL1_uc003bou.2... Hybrid_Cap... view
CLTCL1 p.V1201_splice 22 19189003 19189004 DAOY_CENTRAL_NE... 37 Splice_Site_Ins Ins - C rs11386977 uc002zpb.2 CLTCL1_uc011agv... Hybrid_Cap...
COL3A1 p.P973L 2 189869077 189869077 DAOY_CENTRAL_NE... 37 Missense_Mutation SNP C T uc002uqj.1 Hybrid_Cap... view
CYLD p.F613V 16 50818250 50818250 DAOY_CENTRAL_NE... 37 Missense_Mutation SNP T G uc002egp.1 CYLD_uc002ego.2... Hybrid_Cap... view
DNAH8 p.F2615Y 6 38858449 38858449 DAOY_CENTRAL_NE... 37 Missense_Mutation SNP T A uc003ooe.1 Hybrid_Cap... view
DOCK3 p.E1178V 3 51370606 51370606 DAOY_CENTRAL_NE... 37 Missense_Mutation SNP A T uc011bds.1 Hybrid_Cap... view
EDN1 6 12290729 12290729 DAOY_CENTRAL_NE... 37 5'UTR Del A - uc003nae.3 EDN1_uc010jpb.2... Hybrid_Cap...
EPHA6 3 97367230 97367231 DAOY_CENTRAL_NE... 37 Intron Ins - A rs115253553 uc010how.1 EPHA6_uc003drs.... Hybrid_Cap...
ETV1 7 14028708 14028708 DAOY_CENTRAL_NE... 37 5'UTR Del A - rs77190713 uc011jxq.1 ETV1_uc011jxn.1... Hybrid_Cap...
EWSR1 22 29687480 29687481 DAOY_CENTRAL_NE... 37 Intron Ins - C rs66871950 uc003aev.2 EWSR1_uc003aet.... Hybrid_Cap...
FGFR1OP 6 167453519 167453520 DAOY_CENTRAL_NE... 37 3'UTR Ins - T rs115519488 uc003qvj.2 CCR6_uc003qvl.2... Hybrid_Cap...
FGFR3 4 1809128 1809129 DAOY_CENTRAL_NE... 37 3'UTR Del GT - uc003gdu.2 FGFR3_uc003gdr.... Hybrid_Cap...
FLI1 11 128638217 128638217 DAOY_CENTRAL_NE... 37 Intron Del G - uc010sbu.1 FLI1_uc010sbt.1... Hybrid_Cap...
FN1 2 216244182 216244185 DAOY_CENTRAL_NE... 37 Intron Del GTAC - uc002vfa.2 FN1_uc002vfb.2_... Hybrid_Cap...
FZD1 p.93_94insP 7 90894459 90894460 DAOY_CENTRAL_NE... 37 In_Frame_Ins Ins - CCG uc003ula.2 Hybrid_Cap...
GRIA3 X 122318386 122318387 DAOY_CENTRAL_NE... 37 Splice_Site_Ins Ins - G rs66632982 uc004etq.3 GRIA3_uc004etr.... Hybrid_Cap...
GUCY2C 12 14827464 14827466 DAOY_CENTRAL_NE... 37 Intron Del ATC - rs72525754;rs3083879 uc001rcd.2 GUCY2C_uc009zhz... Hybrid_Cap...
HDAC2 p.81_82insS 6 114292109 114292110 DAOY_CENTRAL_NE... 37 In_Frame_Ins Ins - CTG uc003pwd.1 HDAC2_uc003pwc.... Hybrid_Cap...
HIF1A 14 62213929 62213930 DAOY_CENTRAL_NE... 37 3'UTR Ins - T rs67890419 uc001xfs.2 HIF1A_uc001xfq.... Hybrid_Cap...
HIPK1 p.P750S 1 114508761 114508761 DAOY_CENTRAL_NE... 37 Missense_Mutation SNP C T uc001eem.2 HIPK1_uc001eel.... Hybrid_Cap... view
HNF1A 12 121434630 121434631 DAOY_CENTRAL_NE... 37 Intron Ins - TCATTCAT rs75100977 uc010szn.1 HNF1A_uc001tze.... Hybrid_Cap...
ILK 11 6630029 6630029 DAOY_CENTRAL_NE... 37 Intron Del C - uc001mee.2 ILK_uc001mef.2_... Hybrid_Cap...
ISG15 1 948846 948847 DAOY_CENTRAL_NE... 37 5'UTR Ins - A rs33916361 uc001acj.3 Hybrid_Cap...
ITK p.K387N 5 156670733 156670733 DAOY_CENTRAL_NE... 37 Missense_Mutation SNP G T uc003lwo.1 Hybrid_Cap... view
ITPR2 p.R470_splice 12 26834804 26834805 DAOY_CENTRAL_NE... 37 Splice_Site_Ins Ins - ACTC rs66696203;rs59199365 uc001rhg.2 Hybrid_Cap...
KLK7 19 51480672 51480675 DAOY_CENTRAL_NE... 37 3'UTR Del GGTT - uc002puo.2 KLK7_uc002pup.2... Hybrid_Cap...
KSR2 p.R337H 12 118105353 118105353 DAOY_CENTRAL_NE... 37 Missense_Mutation SNP C T uc001two.2 Hybrid_Cap... view
LRP2 p.F713I 2 170127597 170127597 DAOY_CENTRAL_NE... 37 Missense_Mutation SNP A T uc002ues.2 LRP2_uc010zdf.1... Hybrid_Cap... view
LRP2 p.G522_splice 2 170134463 170134463 DAOY_CENTRAL_NE... 37 Splice_Site_SNP SNP T A uc002ues.2 LRP2_uc010zdf.1... Hybrid_Cap... view
MAF 16 79628537 79628537 DAOY_CENTRAL_NE... 37 Intron Del T - uc002ffm.2 MAF_uc002ffn.2_... Hybrid_Cap...
MAML3 p.Q767_splice 4 140651585 140651587 DAOY_CENTRAL_NE... 37 Splice_Site_Del Del CTG - uc003ihz.1 MGST2_uc010ioi.... Hybrid_Cap...
MAP2K3 p.F325L 17 21217473 21217473 DAOY_CENTRAL_NE... 37 Missense_Mutation SNP C G uc002gys.2 MAP2K3_uc002gyt... Hybrid_Cap... view
MAP3K1 p.T949del 5 56177849 56177851 DAOY_CENTRAL_NE... 37 In_Frame_Del Del CAA - uc003jqw.3 Hybrid_Cap...
MAP3K14 p.R218_splice 17 43364293 43364294 DAOY_CENTRAL_NE... 37 Splice_Site_Ins Ins - G rs66766023 uc002iiw.1 MAP3K14_uc010da... Hybrid_Cap...
MAPK7 p.I792T 17 19286468 19286468 DAOY_CENTRAL_NE... 37 Missense_Mutation SNP T C uc002gvn.2 MAPK7_uc002gvo.... Hybrid_Cap... view
MAPKBP1 15 42111753 42111754 DAOY_CENTRAL_NE... 37 Intron Ins - C rs3034891 uc001zok.3 MAPKBP1_uc001zo... Hybrid_Cap...
MMP8 p.R397_splice 11 102585285 102585285 DAOY_CENTRAL_NE... 37 Splice_Site_SNP SNP A G uc001phe.2 MMP8_uc010rut.1... Hybrid_Cap... view
NCAM1 11 112832307 112832308 DAOY_CENTRAL_NE... 37 5'UTR Ins - A rs117108942 uc009yyq.1 NCAM1_uc001pno.... Hybrid_Cap...
NCAM1 11 112832340 112832340 DAOY_CENTRAL_NE... 37 5'UTR Del C - uc009yyq.1 NCAM1_uc001pno.... Hybrid_Cap...
NCOA3 p.Q1276del 20 46279837 46279839 DAOY_CENTRAL_NE... 37 In_Frame_Del Del CAG - rs2664555 uc002xtk.2 NCOA3_uc010ght.... Hybrid_Cap...
NCOA3 20 46282339 46282340 DAOY_CENTRAL_NE... 37 3'UTR Ins - AT uc002xtk.2 NCOA3_uc002xtl.... Hybrid_Cap...
NEK3 p.K313_splice 13 52718050 52718051 DAOY_CENTRAL_NE... 37 Splice_Site_Ins Ins - T rs72514762 uc001vgh.2 NEK3_uc001vgg.2... Hybrid_Cap...
NOTCH4 6 32170465 32170465 DAOY_CENTRAL_NE... 37 Intron Del G - uc003obb.2 NOTCH4_uc003oba... Hybrid_Cap...
NPR1 1 153665919 153665920 DAOY_CENTRAL_NE... 37 3'UTR Ins - C rs66682713 uc001fcs.3 NPR1_uc010pdz.1... Hybrid_Cap...
NR1H2 p.176_177insQ 19 50881820 50881821 DAOY_CENTRAL_NE... 37 In_Frame_Ins Ins - AAC rs66783852;rs112359270 uc010enw.2 NR1H2_uc002prv.... Hybrid_Cap...
PAX3 2 223158653 223158653 DAOY_CENTRAL_NE... 37 Intron Del T - rs112753212 uc002vmt.1 PAX3_uc002vmy.1... Hybrid_Cap...
PGGT1B 5 114548071 114548072 DAOY_CENTRAL_NE... 37 3'UTR Ins - C uc003kqw.3 PGGT1B_uc003kqx... Hybrid_Cap...
PGR 11 100933598 100933599 DAOY_CENTRAL_NE... 37 Intron Ins - AATGA rs35148438 uc001pgh.2 PGR_uc001pgg.2_... Hybrid_Cap...
PIK3C2G p.Y717H 12 18552615 18552615 DAOY_CENTRAL_NE... 37 Missense_Mutation SNP T C uc010sib.1 PIK3C2G_uc001rd... Hybrid_Cap... view
PIK3R1 p.L380del 5 67589149 67589151 DAOY_CENTRAL_NE... 37 In_Frame_Del Del ATT - uc003jva.2 PIK3R1_uc003jvb... Hybrid_Cap...
PMS1 2 190670539 190670540 DAOY_CENTRAL_NE... 37 Intron Ins - A rs3214425 uc002urh.3 PMS1_uc010zga.1... Hybrid_Cap...
PRKDC p.L1244fs 8 48805816 48805817 DAOY_CENTRAL_NE... 37 Frame_Shift_Ins Ins - G rs67588121 uc003xqi.2 PRKDC_uc003xqj.... Hybrid_Cap...
RAD21 p.I579V 8 117859900 117859900 DAOY_CENTRAL_NE... 37 Missense_Mutation SNP T C uc003yod.2 Hybrid_Cap... view
RBPJ p.R238* 4 26426291 26426291 DAOY_CENTRAL_NE... 37 Nonsense_Mutation SNP C T rs5007634 uc003grx.1 RBPJ_uc003gry.1... Hybrid_Cap... view
ROBO2 3 77666937 77666937 DAOY_CENTRAL_NE... 37 Intron Del A - rs78745603 uc003dpz.2 ROBO2_uc003dpy.... Hybrid_Cap...
RPS6KA5 14 91360733 91360734 DAOY_CENTRAL_NE... 37 Intron Ins - T rs77438853 uc001xys.2 RPS6KA5_uc010tw... Hybrid_Cap...
STK25 2 242435659 242435662 DAOY_CENTRAL_NE... 37 Intron Del AAGG - rs3215138;rs75497042 uc002wbm.2 STK25_uc002wbk.... Hybrid_Cap...
STK31 7 23872024 23872025 DAOY_CENTRAL_NE... 37 3'UTR Ins - TTTG rs66787534 uc003sws.3 STK31_uc003swt.... Hybrid_Cap...
TEC 4 48139307 48139310 DAOY_CENTRAL_NE... 37 3'UTR Del TTAT - rs79098351 uc003gxz.2 Hybrid_Cap...
TP53 p.C242F 17 7577556 7577556 DAOY_CENTRAL_NE... 37 Missense_Mutation SNP C A uc002gim.2 TP53_uc002gig.1... Hybrid_Cap... view
TP63 3 189507518 189507519 DAOY_CENTRAL_NE... 37 Intron Ins - AGAG rs62702062;rs79714037 uc003fry.2 TP63_uc003frx.2... Hybrid_Cap...
TRPS1 8 116635872 116635873 DAOY_CENTRAL_NE... 37 5'UTR Ins - A rs76893349 uc003yny.2 TRPS1_uc011lhy.... Hybrid_Cap...
TSHR p.C41S 14 81422146 81422146 DAOY_CENTRAL_NE... 37 Missense_Mutation SNP G C uc001xvd.1 C14orf145_uc001... Hybrid_Cap... view
VEGFC p.S419_splice 4 177605082 177605084 DAOY_CENTRAL_NE... 37 Splice_Site_Del Del TCA - uc003ius.1 Hybrid_Cap...