Annotation Summary for Cell Line: ECC10  

Cell line primary name: ECC10
Cell line aliases:
Gender:
Site Primary: stomach
Histology: carcinoma
Hist Subtype1: small_cell_adenocarcinoma
Notes:
Source: RIKEN
Expression arrays: BITTS_p_NCLE_RNA12_HG-U133_Plus_2_D08_698918
SNP arrays: QUAFF_p_NCLE_DNAAffy12_GenomeWideSNP_6_B12_592788
Oncomap: yes
Hybrid Capture Sequencing: yes


Mutations in ECC10

GeneProtein
Change
ChrStartEnd SampleNCBI
Build
Variant
Classification
Variant TypeReference
Allele
Tumor
Allele 1
dbSNP IDAnnotation
Transcript
Other
Transcripts
Method View
Reads
Mutation
Assessor
AAK1 p.541_542QQ>Q 2 69741754 69741756 ECC10_STOMACH 37 In_Frame_Del Del TGT - rs55712143 uc002sfp.2 AAK1_uc010fdk.2... Hybrid_Cap...
ACVRL1 p.D445A 12 52312856 52312856 ECC10_STOMACH 37 Missense_Mutation SNP A C uc001rzj.2 ACVRL1_uc001rzk... Hybrid_Cap... view
ADAM22 p.L493I 7 87774440 87774440 ECC10_STOMACH 37 Missense_Mutation SNP C A uc003ujp.1 ADAM22_uc003ujk... Hybrid_Cap... view
ADAM28 8 24211994 24211997 ECC10_STOMACH 37 3'UTR Del CTAT - rs10610134 uc003xdy.2 ADAM28_uc011laa... Hybrid_Cap...
AKAP12 p.1531_1532insE 6 151674116 151674117 ECC10_STOMACH 37 In_Frame_Ins Ins - GAG rs34737819 uc011eep.1 AKAP12_uc003qoe... Hybrid_Cap...
AKAP9 p.V1990L 7 91691791 91691791 ECC10_STOMACH 37 Missense_Mutation SNP G C uc003ulg.2 AKAP9_uc003ulf.... Hybrid_Cap... view
ALPK1 4 113347609 113347610 ECC10_STOMACH 37 Intron Ins - T rs68137453 uc003iap.3 ALPK1_uc003ian.... Hybrid_Cap...
ALS2 2 202587706 202587707 ECC10_STOMACH 37 Intron Ins - A rs3219165 uc002uyo.2 ALS2_uc002uyp.3... Hybrid_Cap...
APC p.E1554fs 5 112175951 112175952 ECC10_STOMACH 37 Frame_Shift_Ins Ins - A uc010jby.2 APC_uc011cvt.1_... Hybrid_Cap...
CACNB2 10 18828721 18828722 ECC10_STOMACH 37 3'UTR Ins - AA rs3841459 uc001ipr.2 CACNB2_uc009xjz... Hybrid_Cap...
CBFA2T3 p.K58E 16 88968044 88968044 ECC10_STOMACH 37 Missense_Mutation SNP T C uc002fmm.1 CBFA2T3_uc002fm... Hybrid_Cap... view
CDK11B 1 1654066 1654068 ECC10_STOMACH 37 Intron Del GCG - uc001agv.1 CDK11B_uc001aha... Hybrid_Cap...
CDK14 p.S375G 7 90708764 90708764 ECC10_STOMACH 37 Missense_Mutation SNP A G uc003uky.2 CDK14_uc003ukz.... Hybrid_Cap... view
CDK6 p.V190I 7 92300819 92300819 ECC10_STOMACH 37 Missense_Mutation SNP C T uc011khw.1 CDK6_uc010lez.2... Hybrid_Cap... view
CHRNA5 15 78885615 78885616 ECC10_STOMACH 37 3'UTR Ins - TA rs72534078 uc002bdy.2 CHRNA3_uc002bea... Hybrid_Cap...
CIITA p.R442W 16 11000670 11000670 ECC10_STOMACH 37 Missense_Mutation SNP C T uc002daj.3 CIITA_uc002dai.... Hybrid_Cap... view
CLTCL1 p.V1201_splice 22 19189003 19189004 ECC10_STOMACH 37 Splice_Site_Ins Ins - C rs11386977 uc002zpb.2 CLTCL1_uc011agv... Hybrid_Cap...
CNTN5 11 99426936 99426936 ECC10_STOMACH 37 De_novo_Start_OutOfFrame SNP G A uc001pga.2 CNTN5_uc009ywv.... Hybrid_Cap... view
CPAMD8 p.G1330A 19 17025247 17025247 ECC10_STOMACH 37 Missense_Mutation SNP C G uc002nfb.2 Hybrid_Cap... view
CSMD3 p.T3272I 8 113275915 113275915 ECC10_STOMACH 37 Missense_Mutation SNP G A uc003ynu.2 CSMD3_uc003yns.... Hybrid_Cap... view
CSNK1D p.D194N 17 80210466 80210466 ECC10_STOMACH 37 Missense_Mutation SNP C T uc002kef.2 SLC16A3_uc002ke... Hybrid_Cap... view
CSNK1E p.E398A 22 38690140 38690140 ECC10_STOMACH 37 Missense_Mutation SNP T G uc003avj.2 CSNK1E_uc003avk... Hybrid_Cap... view
CTBP2 p.K974fs 10 126678123 126678123 ECC10_STOMACH 37 Frame_Shift_Del Del T - uc001lie.3 CTBP2_uc009yak.... Hybrid_Cap...
CYP27B1 p.R153L 12 58159211 58159211 ECC10_STOMACH 37 Missense_Mutation SNP C A uc001spz.1 CYP27B1_uc001sq... Hybrid_Cap... view
CYSLTR2 p.S115P 13 49281296 49281296 ECC10_STOMACH 37 Missense_Mutation SNP T C uc010acx.1 CYSLTR2_uc010ac... Hybrid_Cap... view
DDR2 1 162750211 162750211 ECC10_STOMACH 37 3'UTR Del T - uc001gcf.2 DDR2_uc001gcg.2... Hybrid_Cap...
DNMT3B p.R440fs 20 31384616 31384617 ECC10_STOMACH 37 Frame_Shift_Ins Ins - G uc002wyc.2 DNMT3B_uc010ztx... Hybrid_Cap...
ECM1 p.R258C 1 150483651 150483651 ECC10_STOMACH 37 Missense_Mutation SNP C T uc001euu.2 ECM1_uc010pce.1... Hybrid_Cap... view
EDN1 6 12290729 12290729 ECC10_STOMACH 37 5'UTR Del A - uc003nae.3 EDN1_uc010jpb.2... Hybrid_Cap...
EIF3A p.V1330F 10 120795712 120795712 ECC10_STOMACH 37 Missense_Mutation SNP C A uc001ldu.2 EIF3A_uc010qsu.... Hybrid_Cap... view
EPHA4 2 222290623 222290624 ECC10_STOMACH 37 3'UTR Ins - T uc002vmq.2 EPHA4_uc002vmr.... Hybrid_Cap...
EPHA6 3 97367230 97367231 ECC10_STOMACH 37 Intron Ins - A rs115253553 uc010how.1 EPHA6_uc003drs.... Hybrid_Cap...
ERBB2 p.L755S 17 37880220 37880220 ECC10_STOMACH 37 Missense_Mutation SNP T C uc002hso.2 ERBB2_uc002hsm.... Hybrid_Cap... view
ERBB3 12 56492196 56492196 ECC10_STOMACH 37 Intron Del A - rs77351535 uc001sjh.2 ERBB3_uc009zoj.... Hybrid_Cap...
ERCC2 19 45864919 45864919 ECC10_STOMACH 37 Intron SNP G A rs3916824 uc002pbj.2 ERCC2_uc002pbh.... Hybrid_Cap... view
FANCD2 3 10143086 10143087 ECC10_STOMACH 37 3'UTR Ins - A uc003bux.1 FANCD2_uc003buy... Hybrid_Cap...
FGFR1OP 6 167453519 167453520 ECC10_STOMACH 37 3'UTR Ins - T rs115519488 uc003qvj.2 CCR6_uc003qvl.2... Hybrid_Cap...
FLI1 11 128638217 128638217 ECC10_STOMACH 37 Intron Del G - uc010sbu.1 FLI1_uc010sbt.1... Hybrid_Cap...
FLNC p.F2114L 7 128493654 128493654 ECC10_STOMACH 37 Missense_Mutation SNP T C uc003vnz.3 FLNC_uc003voa.3... Hybrid_Cap... view
FLT4 5 180035183 180035185 ECC10_STOMACH 37 Intron Del AGT - uc003mlz.3 FLT4_uc003mma.3... Hybrid_Cap...
FN1 2 216244182 216244185 ECC10_STOMACH 37 Intron Del GTAC - uc002vfa.2 FN1_uc002vfb.2_... Hybrid_Cap...
FSCB p.E582* 14 44974447 44974447 ECC10_STOMACH 37 Nonsense_Mutation SNP C A uc001wvn.2 Hybrid_Cap... view
GPR112 p.D2657del X 135474445 135474447 ECC10_STOMACH 37 In_Frame_Del Del GAT - rs3030295 uc004ezu.1 GPR112_uc010nsb... Hybrid_Cap...
GRB2 17 73389808 73389808 ECC10_STOMACH 37 5'UTR SNP T C uc002jnx.3 GRB2_uc002jny.3... Hybrid_Cap... view
GRIA3 X 122318386 122318387 ECC10_STOMACH 37 Splice_Site_Ins Ins - G rs66632982 uc004etq.3 GRIA3_uc004etr.... Hybrid_Cap...
GTSE1 p.G478S 22 46712309 46712309 ECC10_STOMACH 37 Missense_Mutation SNP G A uc011aqy.1 GTSE1_uc011aqz.... Hybrid_Cap... view
GUCY2C 12 14827464 14827466 ECC10_STOMACH 37 Intron Del ATC - rs72525754;rs3083879 uc001rcd.2 GUCY2C_uc009zhz... Hybrid_Cap...
HIF1A 14 62213929 62213930 ECC10_STOMACH 37 3'UTR Ins - T rs67890419 uc001xfs.2 HIF1A_uc001xfq.... Hybrid_Cap...
HIF1A 14 62213950 62213950 ECC10_STOMACH 37 3'UTR SNP A G uc001xfs.2 HIF1A_uc001xfq.... Hybrid_Cap... view
ILK 11 6630029 6630029 ECC10_STOMACH 37 Intron Del C - uc001mee.2 ILK_uc001mef.2_... Hybrid_Cap...
KIAA0802 p.G1467S 18 8825907 8825907 ECC10_STOMACH 37 Missense_Mutation SNP G A rs114602899 uc002knr.2 KIAA0802_uc002k... Hybrid_Cap... view
MAMDC4 p.V318A 9 139749232 139749232 ECC10_STOMACH 37 Missense_Mutation SNP T C uc004cjs.2 MAMDC4_uc011mej... Hybrid_Cap... view
MAP2K1 15 66679649 66679650 ECC10_STOMACH 37 5'UTR Ins - C rs67229745 uc010bhq.2 Hybrid_Cap...
MAP3K14 p.R218_splice 17 43364293 43364294 ECC10_STOMACH 37 Splice_Site_Ins Ins - G rs66766023 uc002iiw.1 MAP3K14_uc010da... Hybrid_Cap...
MAP3K5 6 136878751 136878752 ECC10_STOMACH 37 3'UTR Ins - T rs34705939;rs79903899 uc003qhc.2 MAP3K5_uc011edj... Hybrid_Cap...
MARK3 14 103852339 103852339 ECC10_STOMACH 37 5'UTR SNP G T uc001ymz.3 MARK3_uc001ymx.... Hybrid_Cap... view
MARK3 p.D689N 14 103969367 103969367 ECC10_STOMACH 37 Missense_Mutation SNP G A uc001ymz.3 MARK3_uc001ymx.... Hybrid_Cap... view
MAST1 p.S41N 19 12951298 12951298 ECC10_STOMACH 37 Missense_Mutation SNP G A uc002mvm.2 MAST1_uc002mvk.... Hybrid_Cap... view
MLF1 3 158289091 158289091 ECC10_STOMACH 37 5'UTR SNP T A uc003fcc.2 MLF1_uc003fbz.2... Hybrid_Cap... view
MLLT6 p.P389H 17 36872749 36872749 ECC10_STOMACH 37 Missense_Mutation SNP C A uc002hqi.3 MLLT6_uc002hqj.... Hybrid_Cap... view
MSI2 17 55709446 55709446 ECC10_STOMACH 37 Intron SNP C T uc002iuz.1 MSI2_uc010wnm.1... Hybrid_Cap... view
MYH10 p.R682H 17 8424516 8424516 ECC10_STOMACH 37 Missense_Mutation SNP C T uc002glm.2 MYH10_uc002gll.... Hybrid_Cap... view
MYLK p.E1066del 3 123419117 123419119 ECC10_STOMACH 37 In_Frame_Del Del TTC - rs72491150 uc003ego.2 MYLK_uc011bjw.1... Hybrid_Cap...
MYST4 p.E1104del 10 76781906 76781908 ECC10_STOMACH 37 In_Frame_Del Del GAA - rs79644703 uc001jwn.1 MYST4_uc001jwm.... Hybrid_Cap...
NCAM1 11 112832307 112832308 ECC10_STOMACH 37 5'UTR Ins - A rs117108942 uc009yyq.1 NCAM1_uc001pno.... Hybrid_Cap...
NCAM1 11 112832340 112832340 ECC10_STOMACH 37 5'UTR Del C - uc009yyq.1 NCAM1_uc001pno.... Hybrid_Cap...
NCOA1 p.T1020K 2 24952542 24952542 ECC10_STOMACH 37 Missense_Mutation SNP C A uc002rfk.2 NCOA1_uc010eye.... Hybrid_Cap... view
NCOA3 p.Q1276del 20 46279864 46279866 ECC10_STOMACH 37 In_Frame_Del Del CAA - rs1132443;rs28529067 uc002xtk.2 NCOA3_uc010ght.... Hybrid_Cap...
NEK3 p.K313_splice 13 52718050 52718051 ECC10_STOMACH 37 Splice_Site_Ins Ins - T rs72514762 uc001vgh.2 NEK3_uc001vgg.2... Hybrid_Cap...
NFIA 1 61921185 61921186 ECC10_STOMACH 37 3'UTR Ins - T rs57270124;rs76131997 uc010oos.1 NFIA_uc001czy.2... Hybrid_Cap...
NPM1 5 170837734 170837734 ECC10_STOMACH 37 3'UTR Del T - uc011dex.1 NPM1_uc003mbi.2... Hybrid_Cap...
NPR1 p.A369E 1 153654250 153654250 ECC10_STOMACH 37 Missense_Mutation SNP C A uc001fcs.3 NPR1_uc010pdz.1... Hybrid_Cap... view
NPR1 1 153665919 153665920 ECC10_STOMACH 37 3'UTR Ins - C rs66682713 uc001fcs.3 NPR1_uc010pdz.1... Hybrid_Cap...
NR1H2 p.176_177insQ 19 50881822 50881823 ECC10_STOMACH 37 In_Frame_Ins Ins - CAG rs61751954;rs1052533 uc010enw.2 NR1H2_uc002prv.... Hybrid_Cap...
PAX3 2 223066017 223066018 ECC10_STOMACH 37 Intron Ins - C rs115619343 uc002vmt.1 PAX3_uc002vmy.1... Hybrid_Cap...
PAX3 2 223158653 223158653 ECC10_STOMACH 37 Intron Del T - rs112753212 uc002vmt.1 PAX3_uc002vmy.1... Hybrid_Cap...
PAX5 9 37034095 37034095 ECC10_STOMACH 37 5'UTR Del C - uc003zzo.1 PAX5_uc011lpw.1... Hybrid_Cap...
PCDH15 p.D93Y 10 56138598 56138598 ECC10_STOMACH 37 Missense_Mutation SNP C A uc010qhy.1 PCDH15_uc010qhq... Hybrid_Cap... view
PDE4DIP p.L601fs 1 144915624 144915624 ECC10_STOMACH 37 Frame_Shift_Del Del G - rs1778112 uc001elw.3 NBPF10_uc009wir... Hybrid_Cap...
PDE4DIP p.E243fs 1 144923729 144923729 ECC10_STOMACH 37 Frame_Shift_Del Del T - uc001elw.3 NBPF10_uc009wir... Hybrid_Cap...
PDE4DIP p.R32Q 1 145075768 145075768 ECC10_STOMACH 37 Missense_Mutation SNP C T uc001emh.2 NBPF10_uc009wir... Hybrid_Cap... view
PDK4 7 95221928 95221928 ECC10_STOMACH 37 Intron Del A - uc003uoa.2 PDK4_uc003unz.2... Hybrid_Cap...
PGR p.S693I 11 100933312 100933312 ECC10_STOMACH 37 Missense_Mutation SNP C A uc001pgh.2 PGR_uc001pgg.2_... Hybrid_Cap... view
PGR 11 100933598 100933599 ECC10_STOMACH 37 Intron Ins - AATGA rs35148438 uc001pgh.2 PGR_uc001pgg.2_... Hybrid_Cap...
PIK3C2A 11 17111198 17111199 ECC10_STOMACH 37 3'UTR Del GT - uc001mmq.3 PIK3C2A_uc009yg... Hybrid_Cap...
PIK3C2A p.L1150S 11 17132074 17132074 ECC10_STOMACH 37 Missense_Mutation SNP A G uc001mmq.3 PIK3C2A_uc009yg... Hybrid_Cap... view
PIP4K2C p.E102* 12 57988940 57988940 ECC10_STOMACH 37 Nonsense_Mutation SNP G T uc001sou.2 PIP4K2C_uc001so... Hybrid_Cap... view
PLK3 p.G189_splice 1 45267424 45267424 ECC10_STOMACH 37 Splice_Site_SNP SNP G T uc001cmn.2 PLK3_uc001cmo.2... Hybrid_Cap... view
PRKDC p.L1244fs 8 48805816 48805817 ECC10_STOMACH 37 Frame_Shift_Ins Ins - G rs67588121 uc003xqi.2 PRKDC_uc003xqj.... Hybrid_Cap...
PRKDC p.L1080V 8 48815160 48815160 ECC10_STOMACH 37 Missense_Mutation SNP G C uc003xqi.2 PRKDC_uc003xqj.... Hybrid_Cap... view
PRKG2 4 82010799 82010799 ECC10_STOMACH 37 3'UTR SNP T G uc003hmh.2 PRKG2_uc011ccf.... Hybrid_Cap... view
RALBP1 p.V625I 18 9535840 9535840 ECC10_STOMACH 37 Missense_Mutation SNP G A uc002kob.2 RALBP1_uc002koc... Hybrid_Cap... view
RAPGEF2 4 160189200 160189201 ECC10_STOMACH 37 5'UTR Ins - T rs72011511 uc003iqg.3 Hybrid_Cap...
RB1 p.Q685* 13 49033916 49033916 ECC10_STOMACH 37 Nonsense_Mutation SNP C T uc001vcb.2 Hybrid_Cap... view
RECQL4 p.G1168_splice 8 145737063 145737063 ECC10_STOMACH 37 Splice_Site_SNP SNP C G uc003zdj.2 Hybrid_Cap... view
RPS6KA2 p.D438N 6 166862307 166862307 ECC10_STOMACH 37 Missense_Mutation SNP C T uc003qvd.1 RPS6KA2_uc011eg... Hybrid_Cap... view
RPS6KA5 14 91360733 91360734 ECC10_STOMACH 37 Intron Ins - T rs77438853 uc001xys.2 RPS6KA5_uc010tw... Hybrid_Cap...
RPS6KB1 17 58024224 58024225 ECC10_STOMACH 37 3'UTR Ins - AA rs67846207 uc002ixy.2 RPS6KB1_uc010dd... Hybrid_Cap...
SACS p.I4347V 13 23904976 23904976 ECC10_STOMACH 37 Missense_Mutation SNP T C uc001uon.2 SACS_uc001uoo.2... Hybrid_Cap... view
SCYL2 p.N922S 12 100732925 100732925 ECC10_STOMACH 37 Missense_Mutation SNP A G uc001thn.2 Hybrid_Cap... view
SEMA5B 3 122628986 122628986 ECC10_STOMACH 37 3'UTR SNP G A uc003efz.1 SEMA5B_uc011bju... Hybrid_Cap... view
SMAD4 18 48581009 48581009 ECC10_STOMACH 37 Intron SNP T C uc010xdp.1 SMAD4_uc010xdo.... Hybrid_Cap... view
STAT1 2 191840353 191840353 ECC10_STOMACH 37 Intron Del T - uc002usj.2 STAT1_uc010fse.... Hybrid_Cap...
TMEM123 11 102269398 102269398 ECC10_STOMACH 37 3'UTR Del G - uc001pha.2 TMEM123_uc009yx... Hybrid_Cap...
TNKS2 10 93558220 93558220 ECC10_STOMACH 37 5'UTR SNP G A uc001khp.2 Hybrid_Cap... view
TP53 p.S20S 17 7579853 7579853 ECC10_STOMACH 37 Silent SNP T C uc002gim.2 TP53_uc002gig.1... Hybrid_Cap... view
TRIP11 p.H980D 14 92471382 92471382 ECC10_STOMACH 37 Missense_Mutation SNP G C uc001xzy.2 TRIP11_uc010auf... Hybrid_Cap... view
TRPM6 p.M1162I 9 77386669 77386669 ECC10_STOMACH 37 Missense_Mutation SNP C T uc004ajl.1 TRPM6_uc004ajk.... Hybrid_Cap... view
TTN p.A743V 2 179650717 179650717 ECC10_STOMACH 37 Missense_Mutation SNP G A uc010zfg.1 TTN_uc010zfh.1_... Hybrid_Cap... view
ULK1 p.S298L 12 132395290 132395290 ECC10_STOMACH 37 Missense_Mutation SNP C T rs56364352 uc001uje.2 Hybrid_Cap... view
VEGFC p.S419_splice 4 177605082 177605084 ECC10_STOMACH 37 Splice_Site_Del Del TCA - uc003ius.1 Hybrid_Cap...
VRK1 p.K38N 14 97299922 97299922 ECC10_STOMACH 37 Missense_Mutation SNP A T uc001yft.2 Hybrid_Cap... view
WNK1 p.P119T 12 863086 863086 ECC10_STOMACH 37 Missense_Mutation SNP C A uc001qio.3 WNK1_uc001qin.2... Hybrid_Cap... view
ZNF217 p.F561Y 20 52193621 52193621 ECC10_STOMACH 37 Missense_Mutation SNP A T uc002xwq.3 ZNF217_uc010gij... Hybrid_Cap... view