Annotation Summary for Cell Line: HCC1569  

Cell line primary name: HCC1569
Cell line aliases:
Gender: F
Site Primary: breast
Histology: carcinoma
Hist Subtype1: metaplastic_carcinoma
Notes:
Source: ATCC
Expression arrays: CASED_p_NCLE_RNA4_HG-U133_Plus_2_E06_383684
SNP arrays: VAULT_p_NCLE_DNAAffy14_GenomeWideSNP_6_G07_698658
Oncomap: yes
Hybrid Capture Sequencing: yes


Mutations in HCC1569

GeneProtein
Change
ChrStartEnd SampleNCBI
Build
Variant
Classification
Variant TypeReference
Allele
Tumor
Allele 1
dbSNP IDAnnotation
Transcript
Other
Transcripts
Method View
Reads
Mutation
Assessor
ADAM17 10 27037488 27037488 HCC1569_BREAST 37 3'UTR Del A - rs75446996 uc001isx.2 ABI1_uc001ite.2... Hybrid_Cap...
ADAM28 1 179086420 179086420 HCC1569_BREAST 37 Intron Del A - uc001gmj.3 ABL2_uc010pnf.1... Hybrid_Cap...
AKAP12 p.T452A 1 179086521 179086521 HCC1569_BREAST 37 Missense_Mutation SNP T C uc001gmj.3 ABL2_uc010pnf.1... Hybrid_Cap... view
AKAP6 12 52385902 52385902 HCC1569_BREAST 37 Intron SNP A G uc010snn.1 ACVR1B_uc001rzm... Hybrid_Cap... view
APC p.V173A 2 148657457 148657457 HCC1569_BREAST 37 Missense_Mutation SNP T C uc002twg.2 ACVR2A_uc010zbn... Hybrid_Cap... view
AR 2 9630245 9630245 HCC1569_BREAST 37 3'UTR Del T - uc002qzu.2 IAH1_uc010yiz.1... Hybrid_Cap...
AR p.T498I 8 39525683 39525683 HCC1569_BREAST 37 Missense_Mutation SNP C T uc003xni.2 ADAM18_uc010lww... Hybrid_Cap... view
ASPH p.K73K 8 24167475 24167475 HCC1569_BREAST 37 Silent SNP A G uc003xdy.2 ADAM28_uc003xdx... Hybrid_Cap... view
AURKC 8 24211994 24211997 HCC1569_BREAST 37 3'UTR Del CTAT - rs10610134 uc003xdy.2 ADAM28_uc011laa... Hybrid_Cap...
BCR p.P774H 4 175898997 175898997 HCC1569_BREAST 37 Missense_Mutation SNP C A uc003iuc.2 ADAM29_uc003iud... Hybrid_Cap... view
BRAF p.M603V 10 1245963 1245963 HCC1569_BREAST 37 Missense_Mutation SNP T C uc009xhq.2 ADARB2_uc001igm... Hybrid_Cap... view
CABC1 p.1531_1532insE 6 151674116 151674117 HCC1569_BREAST 37 In_Frame_Ins Ins - GAG rs34737819 uc011eep.1 AKAP12_uc003qoe... Hybrid_Cap...
CABC1 p.1335_1336insQ 7 91652178 91652179 HCC1569_BREAST 37 In_Frame_Ins Ins - AAC rs34756483 uc003ulg.2 AKAP9_uc003ule.... Hybrid_Cap...
CAD p.R3320Q 7 91726232 91726232 HCC1569_BREAST 37 Missense_Mutation SNP G A uc003ulg.2 AKAP9_uc003ulf.... Hybrid_Cap... view
CAMK2A p.1388_1389FF>F 18 56203253 56203255 HCC1569_BREAST 37 In_Frame_Del Del AAG - uc002lhj.3 ALPK2_uc002lhk.... Hybrid_Cap...
CDC42BPB p.L735S 2 202606544 202606544 HCC1569_BREAST 37 Missense_Mutation SNP A G uc002uyo.2 ALS2_uc002uyp.3... Hybrid_Cap... view
CDK15 8 1824612 1824612 HCC1569_BREAST 37 Intron SNP C T uc003wpr.2 ARHGEF10_uc003w... Hybrid_Cap... view
CDKN2A p.Q753_splice 8 1871247 1871247 HCC1569_BREAST 37 Splice_Site_SNP SNP T C uc003wpr.2 ARHGEF10_uc003w... Hybrid_Cap... view
CHD1 p.D1037V 11 120346049 120346049 HCC1569_BREAST 37 Missense_Mutation SNP A T uc001pxl.1 ARHGEF12_uc009z... Hybrid_Cap... view
CLTCL1 p.N2130S 1 27106778 27106778 HCC1569_BREAST 37 Missense_Mutation SNP A G uc001bmv.1 ARID1A_uc001bmu... Hybrid_Cap... view
CREB3L2 p.V259A 8 62555461 62555461 HCC1569_BREAST 37 Missense_Mutation SNP A G uc003xuj.2 ASPH_uc011leg.1... Hybrid_Cap... view
DOCK3 p.L1824F 11 108173730 108173730 HCC1569_BREAST 37 Missense_Mutation SNP C T uc001pkb.1 ATM_uc009yxr.1_... Hybrid_Cap... view
ELK1 3 142171806 142171806 HCC1569_BREAST 37 Intron SNP T C uc003eux.3 ATR_uc003euy.1_... Hybrid_Cap... view
EP300 19 57742494 57742507 HCC1569_BREAST 37 5'UTR Del GGACG... - rs67926438;rs112039303;rs59094959 uc002qoe.2 AURKC_uc002qoc.... Hybrid_Cap...
EPHA6 15 91303326 91303326 HCC1569_BREAST 37 Intron Del T - uc002bpr.2 BLM_uc010uqh.1_... Hybrid_Cap...
EPHA8 p.L837del 4 79832207 79832209 HCC1569_BREAST 37 In_Frame_Del Del CTC - uc003hlk.2 PAQR3_uc003hlm.... Hybrid_Cap...
ETV1 p.N1100T 13 32911791 32911791 HCC1569_BREAST 37 Missense_Mutation SNP A C rs80358575 uc001uub.1 Hybrid_Cap... view
FBN2 p.K1860fs 13 32914070 32914070 HCC1569_BREAST 37 Frame_Shift_Del Del A - uc001uub.1 Hybrid_Cap...
FGFR1OP p.815_815E>EE X 49076224 49076225 HCC1569_BREAST 37 In_Frame_Ins Ins - TCC uc004dnb.2 CACNA1F_uc010ni... Hybrid_Cap...
FGFR3 p.G358G 10 75583804 75583804 HCC1569_BREAST 37 Silent SNP C G uc001jvv.1 CAMK2G_uc001jvm... Hybrid_Cap... view
FLI1 p.KE272del 22 37906309 37906314 HCC1569_BREAST 37 In_Frame_Del Del CTCCT... - uc003asx.1 CARD10_uc003ast... Hybrid_Cap...
FMN2 p.G14_splice 4 110619499 110619499 HCC1569_BREAST 37 Splice_Site_SNP SNP C G uc003hzn.1 CASP6_uc003hzo.... Hybrid_Cap... view
FMN2 9 139262055 139262055 HCC1569_BREAST 37 Intron SNP C T uc004chg.3 CARD9_uc011mdw.... Hybrid_Cap... view
FZD1 p.D379G 1 193181589 193181589 HCC1569_BREAST 37 Missense_Mutation SNP A G uc001gtb.2 Hybrid_Cap... view
GLG1 p.M515T 18 25570115 25570115 HCC1569_BREAST 37 Missense_Mutation SNP A G uc002kwg.2 CDH2_uc010xbn.1... Hybrid_Cap... view
GPR112 p.Q10* 16 89753146 89753146 HCC1569_BREAST 37 Nonsense_Mutation SNP C T uc010cio.2 CDK10_uc002foa.... Hybrid_Cap... view
GPR119 p.V20V 12 58145441 58145441 HCC1569_BREAST 37 Silent SNP C T uc001spv.2 CDK4_uc010ssb.1... Hybrid_Cap... view
GRIA3 p.P1684del 5 98192165 98192167 HCC1569_BREAST 37 In_Frame_Del Del AGG - rs79267787;rs61749618 uc003knf.2 CHD1_uc010jbn.2... Hybrid_Cap...
GRIA3 X 122318386 122318387 HCC1569_BREAST 37 Splice_Site_Ins Ins - G rs66632982 uc004etq.3 GRIA3_uc004etr.... Hybrid_Cap...
GRIN2A p.V903_splice 12 120190054 120190055 HCC1569_BREAST 37 Splice_Site_Ins Ins - GA uc001txj.1 CIT_uc001txh.1_... Hybrid_Cap...
GRK6 p.Y251H 5 176860927 176860927 HCC1569_BREAST 37 Missense_Mutation SNP T C uc011dfz.1 GRK6_uc003mgp.2... Hybrid_Cap... view
GUCY2C 12 14827464 14827466 HCC1569_BREAST 37 Intron Del ATC - rs72525754;rs3083879 uc001rcd.2 GUCY2C_uc009zhz... Hybrid_Cap...
HDLBP p.K285E 2 242195619 242195619 HCC1569_BREAST 37 Missense_Mutation SNP T C uc002waz.2 HDLBP_uc002wba.... Hybrid_Cap... view
HERC2 p.V2254A 15 28458913 28458913 HCC1569_BREAST 37 Missense_Mutation SNP A G uc001zbj.2 Hybrid_Cap... view
HIPK2 p.R833C 7 139281683 139281683 HCC1569_BREAST 37 Missense_Mutation SNP G A uc003vvf.3 HIPK2_uc003vvd.... Hybrid_Cap... view
HNF1A 2 201725876 201725876 HCC1569_BREAST 37 Intron SNP T C uc010zhi.1 CLK1_uc002uwe.2... Hybrid_Cap... view
IKBKB p.Y199C 8 42166447 42166447 HCC1569_BREAST 37 Missense_Mutation SNP A G uc003xow.1 IKBKB_uc003xov.... Hybrid_Cap... view
IL2 p.S107G 4 123374897 123374897 HCC1569_BREAST 37 Missense_Mutation SNP T C uc003ier.2 Hybrid_Cap... view
IL21R p.G172_splice 2 201725959 201725959 HCC1569_BREAST 37 Splice_Site_SNP SNP A G uc010zhi.1 CLK1_uc002uwe.2... Hybrid_Cap... view
ILK 11 6630029 6630029 HCC1569_BREAST 37 Intron Del C - uc001mee.2 ILK_uc001mef.2_... Hybrid_Cap...
ILK p.V1201_splice 22 19189003 19189004 HCC1569_BREAST 37 Splice_Site_Ins Ins - C rs11386977 uc002zpb.2 CLTCL1_uc011agv... Hybrid_Cap...
ITGA7 p.M758T 12 56088415 56088415 HCC1569_BREAST 37 Missense_Mutation SNP A G uc001shh.2 ITGA7_uc001shg.... Hybrid_Cap... view
ITGAV 11 99426928 99426928 HCC1569_BREAST 37 De_novo_Start_OutOfFrame SNP A T uc001pga.2 CNTN5_uc009ywv.... Hybrid_Cap... view
ITGB1 p.N557K 10 33200851 33200851 HCC1569_BREAST 37 Missense_Mutation SNP A C uc001iwq.3 ITGB1_uc001iwp.... Hybrid_Cap... view
ITPR1 p.E866G 3 4716026 4716026 HCC1569_BREAST 37 Missense_Mutation SNP A G uc003bqa.2 ITPR1_uc010hca.... Hybrid_Cap... view
ITPR1 p.Y137C 8 67970415 67970415 HCC1569_BREAST 37 Missense_Mutation SNP T C uc003xxe.2 COPS5_uc003xxd.... Hybrid_Cap... view
ITPR2 p.R470_splice 12 26834804 26834805 HCC1569_BREAST 37 Splice_Site_Ins Ins - ACTC rs66696203;rs59199365 uc001rhg.2 Hybrid_Cap...
ITPR2 p.I464V 12 26834826 26834826 HCC1569_BREAST 37 Missense_Mutation SNP T C uc001rhg.2 Hybrid_Cap... view
JAK3 p.F71L 19 17954683 17954683 HCC1569_BREAST 37 Missense_Mutation SNP A G uc002nhn.3 JAK3_uc010ebh.2... Hybrid_Cap... view
JARID2 p.S96S 6 15410561 15410561 HCC1569_BREAST 37 Silent SNP T C uc003nbj.2 JARID2_uc011diu... Hybrid_Cap... view
KALRN p.C2482S 3 124413218 124413218 HCC1569_BREAST 37 Missense_Mutation SNP G C uc003ehg.2 KALRN_uc003ehk.... Hybrid_Cap... view
KIAA1409 p.V2376A 14 94160685 94160685 HCC1569_BREAST 37 Missense_Mutation SNP T C uc001ybv.1 KIAA1409_uc001y... Hybrid_Cap... view
KIAA1549 p.Q1223_splice 7 138588332 138588332 HCC1569_BREAST 37 Splice_Site_SNP SNP A G uc011kql.1 KIAA1549_uc003v... Hybrid_Cap... view
KLK7 p.T100del 7 137612914 137612916 HCC1569_BREAST 37 In_Frame_Del Del TGG - uc003vtw.2 CREB3L2_uc003vt... Hybrid_Cap...
KSR2 p.Y3432C 8 113256730 113256730 HCC1569_BREAST 37 Missense_Mutation SNP T C rs113239226 uc003ynu.2 CSMD3_uc003yns.... Hybrid_Cap... view
LAMP1 p.R1135H 8 113651047 113651047 HCC1569_BREAST 37 Missense_Mutation SNP C T uc003ynu.2 CSMD3_uc003yns.... Hybrid_Cap... view
LATS1 p.F1010fs 6 149983228 149983228 HCC1569_BREAST 37 Frame_Shift_Del Del A - uc003qmu.1 LATS1_uc010kif.... Hybrid_Cap...
LRP1 p.R2483* 12 57586645 57586645 HCC1569_BREAST 37 Nonsense_Mutation SNP C T uc001snd.2 MIR1228_hsa-mir... Hybrid_Cap... view
LRP1B p.N4174D 2 141079652 141079652 HCC1569_BREAST 37 Missense_Mutation SNP T C uc002tvj.1 Hybrid_Cap... view
LRP6 p.S749T 12 12315160 12315160 HCC1569_BREAST 37 Missense_Mutation SNP C G uc001rah.3 BCL2L14_uc001ra... Hybrid_Cap... view
MAML2 p.604_607QQQQ>Q 11 95825375 95825383 HCC1569_BREAST 37 In_Frame_Del Del TGCTG... - rs113349418 uc001pfw.1 Hybrid_Cap...
MAML2 p.R483S 8 68028220 68028220 HCC1569_BREAST 37 Missense_Mutation SNP A C uc003xxi.2 CSPP1_uc003xxg.... Hybrid_Cap... view
MAML3 p.E274G 10 126715508 126715508 HCC1569_BREAST 37 Missense_Mutation SNP T C uc001lie.3 CTBP2_uc009yak.... Hybrid_Cap... view
MAML3 p.Q767_splice 4 140651585 140651587 HCC1569_BREAST 37 Splice_Site_Del Del CTG - uc003ihz.1 MGST2_uc010ioi.... Hybrid_Cap...
MAP2K3 p.F266L 17 21215475 21215475 HCC1569_BREAST 37 Missense_Mutation SNP T C uc002gys.2 MAP2K3_uc002gyt... Hybrid_Cap... view
MAP3K1 p.T949del 5 56177849 56177851 HCC1569_BREAST 37 In_Frame_Del Del CAA - uc003jqw.3 Hybrid_Cap...
MAP3K14 p.R218_splice 17 43364293 43364294 HCC1569_BREAST 37 Splice_Site_Ins Ins - G rs66766023 uc002iiw.1 MAP3K14_uc010da... Hybrid_Cap...
MAP3K14 p.I467V 17 43351852 43351852 HCC1569_BREAST 37 Missense_Mutation SNP T C uc002iiw.1 MAP3K14_uc002ii... Hybrid_Cap... view
MAP3K14 p.T175A 6 84629132 84629132 HCC1569_BREAST 37 Missense_Mutation SNP A G uc003pkf.2 Hybrid_Cap... view
MAP3K4 p.A1199del 6 161519351 161519353 HCC1569_BREAST 37 In_Frame_Del Del CTG - uc003qtn.2 MAP3K4_uc010kkc... Hybrid_Cap...
MAP3K7 6 91226170 91226170 HCC1569_BREAST 37 3'UTR Del A - uc003pnz.1 MAP3K7_uc003pny... Hybrid_Cap...
MAP4K3 p.T203A 2 39553342 39553342 HCC1569_BREAST 37 Missense_Mutation SNP T C uc002rro.2 MAP4K3_uc002rrp... Hybrid_Cap... view
MAPKBP1 p.A93T 7 25163361 25163361 HCC1569_BREAST 37 Missense_Mutation SNP C T uc003sxl.2 Hybrid_Cap... view
MECOM p.K801fs 3 168833257 168833257 HCC1569_BREAST 37 Frame_Shift_Del Del T - uc011bpj.1 MECOM_uc010hwk.... Hybrid_Cap...
MED13L p.D714G 12 116445313 116445313 HCC1569_BREAST 37 Missense_Mutation SNP T C uc001tvw.2 Hybrid_Cap... view
MEF2A p.QQQ426del 15 100252710 100252718 HCC1569_BREAST 37 In_Frame_Del Del CAGCA... - uc010urw.1 MEF2A_uc010urv.... Hybrid_Cap...
MELK p.G20_splice 9 36581738 36581738 HCC1569_BREAST 37 Splice_Site_SNP SNP T C uc003zzn.2 MELK_uc011lpm.1... Hybrid_Cap... view
MFSD4 p.P234S 1 205553092 205553092 HCC1569_BREAST 37 Missense_Mutation SNP C T uc001hcv.3 MFSD4_uc010prk.... Hybrid_Cap... view
MGA 15 42059587 42059587 HCC1569_BREAST 37 3'UTR SNP A G uc010ucy.1 MGA_uc010ucz.1_... Hybrid_Cap... view
MLL3 p.A207V 2 38301912 38301912 HCC1569_BREAST 37 Missense_Mutation SNP G A rs72480438 uc002rqo.2 Hybrid_Cap... view
MLL3 p.L504P 7 151949134 151949134 HCC1569_BREAST 37 Missense_Mutation SNP A G uc003wla.2 Hybrid_Cap... view
MLLT10 p.S192T 7 87517351 87517351 HCC1569_BREAST 37 Missense_Mutation SNP T A uc003ujf.1 DBF4_uc003ujh.1... Hybrid_Cap... view
MLLT3 7 24738624 24738624 HCC1569_BREAST 37 3'UTR SNP A G uc010kus.1 DFNA5_uc003swz.... Hybrid_Cap... view
MSH2 p.N1726S 6 38825388 38825388 HCC1569_BREAST 37 Missense_Mutation SNP A G uc003ooe.1 Hybrid_Cap... view
MSN X 64887653 64887653 HCC1569_BREAST 37 5'UTR SNP G A uc004dwf.2 Hybrid_Cap... view
MST1R p.S244F 3 49940312 49940312 HCC1569_BREAST 37 Missense_Mutation SNP G A uc003cxy.3 MST1R_uc011bdd.... Hybrid_Cap... view
MYH11 16 15797782 15797783 HCC1569_BREAST 37 3'UTR Ins - T rs5815842 uc002ddx.2 MYH11_uc002ddv.... Hybrid_Cap...
MYLK p.R571Q 20 31387087 31387087 HCC1569_BREAST 37 Missense_Mutation SNP G A uc002wyc.2 DNMT3B_uc010zty... Hybrid_Cap... view
MYLK 3 123400981 123400981 HCC1569_BREAST 37 Intron SNP C G uc003ego.2 MYLK_uc011bjv.1... Hybrid_Cap... view
MYLK p.R1678H 3 51399316 51399316 HCC1569_BREAST 37 Missense_Mutation SNP G A uc011bds.1 Hybrid_Cap... view
MYO3B 2 171238670 171238670 HCC1569_BREAST 37 Intron SNP G A uc002ufy.2 MYO3B_uc002ufv.... Hybrid_Cap... view
MYST4 p.E1104del 10 76781906 76781908 HCC1569_BREAST 37 In_Frame_Del Del GAA - rs79644703 uc001jwn.1 MYST4_uc001jwm.... Hybrid_Cap...
NACA p.P1818S 12 57109862 57109862 HCC1569_BREAST 37 Missense_Mutation SNP G A uc009zoy.1 NACA_uc001slz.2... Hybrid_Cap... view
NAV3 p.R1928* 12 78579470 78579470 HCC1569_BREAST 37 Nonsense_Mutation SNP C T uc001syp.2 NAV3_uc001syo.2... Hybrid_Cap... view
NCAM1 11 112832307 112832308 HCC1569_BREAST 37 5'UTR Ins - A rs117108942 uc009yyq.1 NCAM1_uc001pno.... Hybrid_Cap...
NCAM1 11 112832340 112832340 HCC1569_BREAST 37 5'UTR Del C - uc009yyq.1 NCAM1_uc001pno.... Hybrid_Cap...
NCAM1 p.I394T 11 113281600 113281600 HCC1569_BREAST 37 Missense_Mutation SNP A G uc001pnz.2 DRD2_uc010rwv.1... Hybrid_Cap... view
NCAM1 6 56473904 56473904 HCC1569_BREAST 37 Intron SNP G C uc003pdf.2 DST_uc003pcz.3_... Hybrid_Cap... view
NCOA2 p.Q1333R 6 56496054 56496054 HCC1569_BREAST 37 Missense_Mutation SNP T C uc003pdf.2 DST_uc003pcz.3_... Hybrid_Cap... view
NCOA2 p.A464V 8 71069209 71069209 HCC1569_BREAST 37 Missense_Mutation SNP G A uc003xyn.1 Hybrid_Cap... view
NCOA3 p.Q1276del 20 46279864 46279866 HCC1569_BREAST 37 In_Frame_Del Del CAA - rs1132443;rs28529067 uc002xtk.2 NCOA3_uc010ght.... Hybrid_Cap...
NCOA4 p.T545A 10 51585486 51585486 HCC1569_BREAST 37 Missense_Mutation SNP A G uc009xon.2 PARG_uc001jih.2... Hybrid_Cap... view
NCOA4 p.K468fs 12 4719362 4719362 HCC1569_BREAST 37 Frame_Shift_Del Del A - uc009zeh.1 DYRK4_uc001qmx.... Hybrid_Cap...
NEK10 p.H547R 8 144662896 144662896 HCC1569_BREAST 37 Missense_Mutation SNP T C uc003yyq.1 NAPRT1_uc003yym... Hybrid_Cap... view
NEK11 p.Y29Y 3 130748639 130748639 HCC1569_BREAST 37 Silent SNP C T uc003eny.2 NEK11_uc003enx.... Hybrid_Cap... view
NEK3 13 52707186 52707186 HCC1569_BREAST 37 3'UTR SNP A G uc001vgh.2 NEK3_uc001vgg.2... Hybrid_Cap... view
NFIA p.Y641H 16 22291550 22291550 HCC1569_BREAST 37 Missense_Mutation SNP T C uc002dki.2 EEF2K_uc002dkh.... Hybrid_Cap... view
NIPBL p.F2290fs 5 37049317 37049317 HCC1569_BREAST 37 Frame_Shift_Del Del T - uc003jkl.3 NIPBL_uc003jkk.... Hybrid_Cap...
NIPBL 5 37051862 37051862 HCC1569_BREAST 37 Intron Del T - uc003jkl.3 NIPBL_uc003jkk.... Hybrid_Cap...
NOS2 p.S646P 17 26096101 26096101 HCC1569_BREAST 37 Missense_Mutation SNP A G uc002gzu.2 NOS2_uc010wab.1... Hybrid_Cap... view
NOTCH4 p.K255E 6 32188791 32188791 HCC1569_BREAST 37 Missense_Mutation SNP T C uc003obb.2 NOTCH4_uc011dpu... Hybrid_Cap... view
NPR1 p.M1053V 2 88857448 88857448 HCC1569_BREAST 37 Missense_Mutation SNP T C uc002stc.3 Hybrid_Cap... view
NPR1 1 153665919 153665920 HCC1569_BREAST 37 3'UTR Ins - C rs66682713 uc001fcs.3 NPR1_uc010pdz.1... Hybrid_Cap...
NR1H2 p.176_177insQ 19 50881822 50881823 HCC1569_BREAST 37 In_Frame_Ins Ins - CAG rs61751954;rs1052533 uc010enw.2 NR1H2_uc002prv.... Hybrid_Cap...
NR1H2 p.T9A 3 170625571 170625571 HCC1569_BREAST 37 Missense_Mutation SNP T C uc003fhd.2 Hybrid_Cap... view
NR3C1 5 142659072 142659072 HCC1569_BREAST 37 3'UTR SNP A C rs61753507 uc003lmy.2 NR3C1_uc003lmz.... Hybrid_Cap... view
NR4A3 p.D457G 9 102607013 102607013 HCC1569_BREAST 37 Missense_Mutation SNP A G uc004bai.2 NR4A3_uc004baf.... Hybrid_Cap... view
NTRK3 p.G98R 1 38227635 38227635 HCC1569_BREAST 37 Missense_Mutation SNP C T uc009vvi.2 EPHA10_uc001cbw... Hybrid_Cap... view
NUP153 p.I1070M 6 17629313 17629313 HCC1569_BREAST 37 Missense_Mutation SNP T C rs79805734 uc011dje.1 NUP153_uc003ncd... Hybrid_Cap... view
NYNRIN p.G436fs 14 24878306 24878306 HCC1569_BREAST 37 Frame_Shift_Del Del G - uc001wpf.3 Hybrid_Cap...
OMG p.N72S 17 29623135 29623135 HCC1569_BREAST 37 Missense_Mutation SNP T C uc002hgj.2 NF1_uc002hgg.2_... Hybrid_Cap... view
PAX3 2 222290624 222290624 HCC1569_BREAST 37 3'UTR Del T - uc002vmq.2 EPHA4_uc002vmr.... Hybrid_Cap...
PCDH15 p.Y936H 10 55755486 55755486 HCC1569_BREAST 37 Missense_Mutation SNP A G uc010qhy.1 PCDH15_uc010qhq... Hybrid_Cap... view
PCDH15 3 97367230 97367231 HCC1569_BREAST 37 Intron Ins - A rs115253553 uc010how.1 EPHA6_uc003drs.... Hybrid_Cap...
PCM1 p.A310T 8 17804839 17804839 HCC1569_BREAST 37 Missense_Mutation SNP G A uc003wyi.3 PCM1_uc011kyh.1... Hybrid_Cap... view
PCM1 8 17813218 17813218 HCC1569_BREAST 37 Intron Del T - uc003wyi.3 PCM1_uc011kyh.1... Hybrid_Cap...
PDE4DIP p.Q1665fs 1 144873963 144873963 HCC1569_BREAST 37 Frame_Shift_Del Del T - uc001elw.3 NBPF10_uc009wir... Hybrid_Cap...
PDE4DIP p.V486fs 1 144917828 144917828 HCC1569_BREAST 37 Frame_Shift_Del Del A - uc001elw.3 NBPF10_uc009wir... Hybrid_Cap...
PDE4DIP p.V362V 1 144921943 144921943 HCC1569_BREAST 37 Silent SNP T C uc001elw.3 NBPF10_uc009wir... Hybrid_Cap... view
PDGFB p.M93T 22 39627805 39627805 HCC1569_BREAST 37 Missense_Mutation SNP A G uc003axf.2 PDGFB_uc003axe.... Hybrid_Cap... view
PDGFRA 4 55131002 55131003 HCC1569_BREAST 37 Intron Del AA - uc003han.3 PDGFRA_uc003haa... Hybrid_Cap...
PER1 p.S97N 17 8053621 8053621 HCC1569_BREAST 37 Missense_Mutation SNP C T uc002gkd.2 PER1_uc010vuq.1... Hybrid_Cap... view
PGGT1B p.L933R 3 134968285 134968285 HCC1569_BREAST 37 Missense_Mutation SNP T G uc003eqt.2 EPHB1_uc003equ.... Hybrid_Cap... view
PGR p.I614T 11 100962556 100962556 HCC1569_BREAST 37 Missense_Mutation SNP A G uc001pgh.2 PGR_uc001pgi.2_... Hybrid_Cap... view
PHF3 p.T158fs 6 64394097 64394097 HCC1569_BREAST 37 Frame_Shift_Del Del A - uc003pep.1 PHF3_uc010kaf.1... Hybrid_Cap...
PHF3 p.Y1312H 6 64421195 64421195 HCC1569_BREAST 37 Missense_Mutation SNP T C uc003pep.1 PHF3_uc003pen.2... Hybrid_Cap... view
PHIP p.S645N 6 79708054 79708054 HCC1569_BREAST 37 Missense_Mutation SNP C T uc003pir.2 PHIP_uc011dyp.1... Hybrid_Cap... view
PIK3C2A 11 17111198 17111199 HCC1569_BREAST 37 3'UTR Del GT - uc001mmq.3 PIK3C2A_uc009yg... Hybrid_Cap...
PIK3C2B p.M1131T 1 204408187 204408187 HCC1569_BREAST 37 Missense_Mutation SNP A G uc001haw.2 PIK3C2B_uc010pq... Hybrid_Cap... view
PIK3R1 5 67584513 67584513 HCC1569_BREAST 37 Intron Del T - uc003jva.2 PIK3R1_uc003jvb... Hybrid_Cap...
PIK3R4 p.M239T 3 130463347 130463347 HCC1569_BREAST 37 Missense_Mutation SNP A G uc003enj.2 Hybrid_Cap... view
PKHD1 p.F1270L 13 103519108 103519108 HCC1569_BREAST 37 Missense_Mutation SNP T C uc001vpu.1 ERCC5_uc001vpw.... Hybrid_Cap... view
PLCB2 p.D1410Y 3 10140446 10140446 HCC1569_BREAST 37 Missense_Mutation SNP G T uc003buw.2 FANCD2_uc003bux... Hybrid_Cap... view
PLCG1 p.A662T 20 39795018 39795018 HCC1569_BREAST 37 Missense_Mutation SNP G A uc002xjo.1 PLCG1_uc002xjp.... Hybrid_Cap... view
PLK2 5 57754170 57754175 HCC1569_BREAST 37 Intron Del AGAGA... - uc003jrn.2 PLK2_uc011cql.1... Hybrid_Cap...
PPP1R3A p.V384A 7 113519996 113519996 HCC1569_BREAST 37 Missense_Mutation SNP A G uc010ljy.1 Hybrid_Cap... view
PRKACA p.G321R 19 14204019 14204019 HCC1569_BREAST 37 Missense_Mutation SNP C G uc002myc.2 SAMD1_uc010xnl.... Hybrid_Cap... view
PRKCD p.I2477V 17 80037126 80037126 HCC1569_BREAST 37 Missense_Mutation SNP T C uc002kdu.2 FASN_uc002kdv.1... Hybrid_Cap... view
PRKD1 p.A487V 14 30100160 30100160 HCC1569_BREAST 37 Missense_Mutation SNP G A uc001wqh.2 Hybrid_Cap... view
PRKDC p.V471I 5 127728882 127728882 HCC1569_BREAST 37 Missense_Mutation SNP C T uc003kuu.2 FBN2_uc003kuv.2... Hybrid_Cap... view
PRKDC p.D3619G 8 48701513 48701513 HCC1569_BREAST 37 Missense_Mutation SNP T C uc003xqi.2 PRKDC_uc003xqj.... Hybrid_Cap... view
PRKDC p.A1380T 8 48801717 48801717 HCC1569_BREAST 37 Missense_Mutation SNP C T rs56209904 uc003xqi.2 PRKDC_uc003xqj.... Hybrid_Cap... view
PRKDC p.L1244fs 8 48805816 48805817 HCC1569_BREAST 37 Frame_Shift_Ins Ins - G rs67588121 uc003xqi.2 PRKDC_uc003xqj.... Hybrid_Cap...
PSEN1 p.V97F 3 59908131 59908131 HCC1569_BREAST 37 Missense_Mutation SNP C A uc003dkx.3 FHIT_uc003dky.2... Hybrid_Cap... view
PTEN p.L265fs 10 89717770 89717770 HCC1569_BREAST 37 Frame_Shift_Del Del A - uc001kfb.2 Hybrid_Cap...
PTEN 10 89725294 89725294 HCC1569_BREAST 37 3'UTR Del T - rs1044487 uc001kfb.2 Hybrid_Cap...
PTPRD p.N211S 9 8524972 8524972 HCC1569_BREAST 37 Missense_Mutation SNP T C uc003zkk.2 PTPRD_uc003zkp.... Hybrid_Cap... view
RASA1 p.T843N 5 86675592 86675592 HCC1569_BREAST 37 Missense_Mutation SNP C A uc003kiw.2 RASA1_uc010jav.... Hybrid_Cap... view
RECQL4 p.S448G 4 54319143 54319143 HCC1569_BREAST 37 Missense_Mutation SNP A G uc003gzy.2 PDGFRA_uc003haa... Hybrid_Cap... view
RECQL4 p.R766fs 8 145738768 145738768 HCC1569_BREAST 37 Frame_Shift_Del Del G - uc003zdj.2 Hybrid_Cap...
REM1 p.R244H 20 30072067 30072067 HCC1569_BREAST 37 Missense_Mutation SNP G A uc002wwa.2 NCRNA00028_uc01... Hybrid_Cap... view
RIPK1 p.T277A 6 3085633 3085633 HCC1569_BREAST 37 Missense_Mutation SNP A G uc010jni.2 RIPK1_uc003muv.... Hybrid_Cap... view
ROBO1 3 78647956 78647956 HCC1569_BREAST 37 3'UTR SNP T C uc003dqe.2 ROBO1_uc003dqb.... Hybrid_Cap... view
ROBO1 p.E373G 3 78737850 78737850 HCC1569_BREAST 37 Missense_Mutation SNP T C uc003dqe.2 ROBO1_uc003dqb.... Hybrid_Cap... view
ROBO1 p.H313H 3 78763653 78763653 HCC1569_BREAST 37 Silent SNP A G uc003dqe.2 ROBO1_uc003dqb.... Hybrid_Cap... view
ROCK2 p.I82fs 2 11426745 11426745 HCC1569_BREAST 37 Frame_Shift_Del Del T - uc002rbd.1 Hybrid_Cap...
RPN1 11 128638217 128638217 HCC1569_BREAST 37 Intron Del G - uc010sbu.1 FLI1_uc010sbt.1... Hybrid_Cap...
SCRIB p.R1044W 8 144886101 144886101 HCC1569_BREAST 37 Missense_Mutation SNP G A uc003yzo.1 SCRIB_uc003yzn.... Hybrid_Cap... view
SEMA5B p.P260T 3 122646709 122646709 HCC1569_BREAST 37 Missense_Mutation SNP G T uc003efz.1 SEMA5B_uc011bju... Hybrid_Cap... view
SGK196 8 42978110 42978110 HCC1569_BREAST 37 3'UTR SNP C T uc003xpw.2 Hybrid_Cap... view
SGK223 p.A1391fs 8 8175714 8175714 HCC1569_BREAST 37 Frame_Shift_Del Del C - uc003wsh.3 Hybrid_Cap...
SLCO4A1 p.S705G 20 61303189 61303189 HCC1569_BREAST 37 Missense_Mutation SNP A G uc002ydb.1 SLCO4A1_uc002yd... Hybrid_Cap... view
SMC2 p.C308R 2 216289931 216289931 HCC1569_BREAST 37 Missense_Mutation SNP A G uc002vfa.2 FN1_uc002vfb.2_... Hybrid_Cap... view
SNRK p.E294G 3 43381928 43381928 HCC1569_BREAST 37 Missense_Mutation SNP A G uc003cms.3 SNRK_uc003cmt.3... Hybrid_Cap... view
SORL1 p.P1113_splice 11 121440981 121440981 HCC1569_BREAST 37 Splice_Site_SNP SNP T C uc001pxx.2 Hybrid_Cap... view
SRPK2 7 104758220 104758220 HCC1569_BREAST 37 3'UTR SNP T C uc003vcv.2 SRPK2_uc003vct.... Hybrid_Cap... view
STAG3 p.E1095G 7 99808679 99808679 HCC1569_BREAST 37 Missense_Mutation SNP A G uc003utx.1 STAG3_uc011kjk.... Hybrid_Cap... view
STAT1 p.L166S 2 191864396 191864396 HCC1569_BREAST 37 Missense_Mutation SNP A G uc002usj.2 STAT1_uc010fse.... Hybrid_Cap... view
STIL p.E922G 1 47728639 47728639 HCC1569_BREAST 37 Missense_Mutation SNP T C uc001crd.1 TAL1_uc001crb.1... Hybrid_Cap... view
STK25 9 132658079 132658079 HCC1569_BREAST 37 Intron Del T - uc004byw.1 FNBP1_uc011mbv.... Hybrid_Cap...
STK3 p.D507G 8 99468110 99468110 HCC1569_BREAST 37 Missense_Mutation SNP T C uc003yio.2 STK3_uc003yip.2... Hybrid_Cap... view
STK31 p.W920_splice 7 23830567 23830567 HCC1569_BREAST 37 Splice_Site_SNP SNP T C uc003sws.3 STK31_uc003swt.... Hybrid_Cap... view
STK31 7 23872024 23872025 HCC1569_BREAST 37 3'UTR Ins - TTTG rs66787534 uc003sws.3 STK31_uc003swt.... Hybrid_Cap...
STK31 p.N382D 7 90895339 90895339 HCC1569_BREAST 37 Missense_Mutation SNP A G uc003ula.2 Hybrid_Cap... view
STK40 p.P240S 3 128204723 128204723 HCC1569_BREAST 37 Missense_Mutation SNP G A uc003ekm.3 GATA2_uc003ekn.... Hybrid_Cap... view
TCF12 p.A180fs 15 57489983 57489984 HCC1569_BREAST 37 Frame_Shift_Ins Ins - A uc002aea.2 TCF12_uc010ugm.... Hybrid_Cap...
TCF21 p.G55S 6 134210698 134210698 HCC1569_BREAST 37 Missense_Mutation SNP G A uc003qei.3 TCF21_uc003qej.... Hybrid_Cap... view
TGFBR1 p.V252L 9 101900320 101900320 HCC1569_BREAST 37 Missense_Mutation SNP G T uc004azc.2 TGFBR1_uc004azd... Hybrid_Cap... view
TIE1 p.D578G 1 43778078 43778078 HCC1569_BREAST 37 Missense_Mutation SNP A G uc001ciu.2 TIE1_uc010okd.1... Hybrid_Cap... view
TLN1 p.S1055R 9 35714034 35714034 HCC1569_BREAST 37 Missense_Mutation SNP A T uc003zxt.2 Hybrid_Cap... view
TLR3 4 187003454 187003454 HCC1569_BREAST 37 Intron Del T - uc003iyq.2 TLR3_uc011ckz.1... Hybrid_Cap...
TNIK 3 170819514 170819514 HCC1569_BREAST 37 Intron Del A - uc003fhh.2 TNIK_uc003fhi.2... Hybrid_Cap...
TNNI3K p.S170P 1 74715198 74715198 HCC1569_BREAST 37 Missense_Mutation SNP T C uc001dge.1 TNNI3K_uc001dgc... Hybrid_Cap... view
TNRC6B p.D493G 22 40661712 40661712 HCC1569_BREAST 37 Missense_Mutation SNP A G uc011aor.1 TNRC6B_uc003aym... Hybrid_Cap... view
TNRC6B p.E1389D 22 40704562 40704562 HCC1569_BREAST 37 Missense_Mutation SNP G T uc011aor.1 TNRC6B_uc003aym... Hybrid_Cap... view
TOP2B p.D754G 3 25666243 25666243 HCC1569_BREAST 37 Missense_Mutation SNP T C uc003cdj.2 TOP2B_uc011awn.... Hybrid_Cap... view
TOX p.Y370C 8 59728180 59728180 HCC1569_BREAST 37 Missense_Mutation SNP T C uc003xtw.1 Hybrid_Cap... view
TP53 p.E294* 17 7577058 7577058 HCC1569_BREAST 37 Nonsense_Mutation SNP C A uc002gim.2 TP53_uc002gig.1... Hybrid_Cap... view
TRIO p.K1072_splice 5 14369634 14369634 HCC1569_BREAST 37 Splice_Site_SNP SNP T C uc003jff.2 TRIO_uc003jfg.2... Hybrid_Cap... view
TRPS1 p.Y266C 6 10529941 10529941 HCC1569_BREAST 37 Missense_Mutation SNP A G uc010joo.2 GCNT2_uc010jol.... Hybrid_Cap... view
TSHR p.T179A 14 81558942 81558942 HCC1569_BREAST 37 Missense_Mutation SNP A G rs112294119 uc001xvd.1 TSHR_uc001xvb.1... Hybrid_Cap... view
TTK p.E851fs 6 80751897 80751897 HCC1569_BREAST 37 Frame_Shift_Del Del A - uc003pjc.2 TTK_uc003pjb.3_... Hybrid_Cap...
TTN p.V33008A 2 179393751 179393751 HCC1569_BREAST 37 Missense_Mutation SNP A G uc010zfg.1 TTN_uc010zfh.1_... Hybrid_Cap... view
TTN p.R26446Q 2 179423145 179423145 HCC1569_BREAST 37 Missense_Mutation SNP C T uc010zfg.1 TTN_uc010zfh.1_... Hybrid_Cap... view
TTN p.R14655Q 2 179474482 179474482 HCC1569_BREAST 37 Missense_Mutation SNP C T uc010zfg.1 TTN_uc010zfh.1_... Hybrid_Cap... view
TTN 2 179605599 179605599 HCC1569_BREAST 37 Intron SNP C G uc010zfg.1 TTN_uc010zfh.1_... Hybrid_Cap... view
TTN p.V1900M 2 179640893 179640893 HCC1569_BREAST 37 Missense_Mutation SNP C T uc010zfg.1 TTN_uc010zfh.1_... Hybrid_Cap... view
TTN p.G349D 2 179659848 179659848 HCC1569_BREAST 37 Missense_Mutation SNP C T uc010zfg.1 TTN_uc010zfh.1_... Hybrid_Cap... view
TTN p.E371K 5 42718720 42718720 HCC1569_BREAST 37 Missense_Mutation SNP G A uc003jmt.2 GHR_uc011cpq.1_... Hybrid_Cap... view
UBE3B 12 109947357 109947358 HCC1569_BREAST 37 Intron Ins - T uc001top.2 UBE3B_uc001toq.... Hybrid_Cap...
UNC13C p.R933H 16 74496522 74496522 HCC1569_BREAST 37 Missense_Mutation SNP C T uc002fcx.2 GLG1_uc002fcy.3... Hybrid_Cap... view
URB2 p.I72F 1 229768103 229768103 HCC1569_BREAST 37 Missense_Mutation SNP A T uc001hts.1 URB2_uc009xfd.1... Hybrid_Cap... view
VEGFC p.S419_splice 4 177605082 177605084 HCC1569_BREAST 37 Splice_Site_Del Del TCA - uc003ius.1 Hybrid_Cap...
VEGFC p.D2657del X 135474445 135474447 HCC1569_BREAST 37 In_Frame_Del Del GAT - rs3030295 uc004ezu.1 GPR112_uc010nsb... Hybrid_Cap...
VPS13B p.N204S 8 100123356 100123356 HCC1569_BREAST 37 Missense_Mutation SNP A G uc003yiv.2 VPS13B_uc003yiw... Hybrid_Cap... view
WHSC1L1 p.G920C 8 38156962 38156962 HCC1569_BREAST 37 Missense_Mutation SNP C A uc003xli.2 WHSC1L1_uc011lb... Hybrid_Cap... view
WNK1 p.E580fs 12 970297 970297 HCC1569_BREAST 37 Frame_Shift_Del Del A - uc001qio.3 WNK1_uc001qip.3... Hybrid_Cap...
XPA p.S233N 9 100437845 100437845 HCC1569_BREAST 37 Missense_Mutation SNP C T uc004axr.3 XPA_uc004axs.3_... Hybrid_Cap... view
YSK4 p.M4T 2 135782207 135782207 HCC1569_BREAST 37 Missense_Mutation SNP A G uc002tue.1 YSK4_uc010fne.1... Hybrid_Cap... view
ZAK 2 174074693 174074693 HCC1569_BREAST 37 Intron Del T - uc002uhz.2 ZAK_uc002uhx.2_... Hybrid_Cap...
ZBTB16 11 114121372 114121372 HCC1569_BREAST 37 3'UTR Del A - uc001pop.2 ZBTB16_uc001poq... Hybrid_Cap...
ZNF423 p.T68A 7 37780197 37780197 HCC1569_BREAST 37 Missense_Mutation SNP A G uc003tfm.1 Hybrid_Cap... view