Annotation Summary for Cell Line: KP-1N  

Cell line primary name: KP-1N
Cell line aliases:
Gender:
Site Primary: pancreas
Histology: carcinoma
Hist Subtype1: ductal_carcinoma
Notes: Identical lines: PANC-1, KP-1N and KP-1NL share high SNP identity
Source: HSRRB
Expression arrays:
SNP arrays:
Oncomap:
Hybrid Capture Sequencing: yes


Mutations in KP-1N

GeneProtein
Change
ChrStartEnd SampleNCBI
Build
Variant
Classification
Variant TypeReference
Allele
Tumor
Allele 1
dbSNP IDAnnotation
Transcript
Other
Transcripts
Method View
Reads
Mutation
Assessor
ABCC4 p.K1070N 13 95723916 95723916 KP1N_PANCREAS 37 Missense_Mutation SNP C A uc001vmd.3 ABCC4_uc010afk.... Hybrid_Cap... view
ADAM17 2 9630245 9630245 KP1N_PANCREAS 37 3'UTR Del T - uc002qzu.2 IAH1_uc010yiz.1... Hybrid_Cap...
ADAM28 8 24211994 24211997 KP1N_PANCREAS 37 3'UTR Del CTAT - rs10610134 uc003xdy.2 ADAM28_uc011laa... Hybrid_Cap...
AKAP12 p.1531_1532insE 6 151674116 151674117 KP1N_PANCREAS 37 In_Frame_Ins Ins - GAG rs34737819 uc011eep.1 AKAP12_uc003qoe... Hybrid_Cap...
AKAP9 p.1335_1336insQ 7 91652178 91652179 KP1N_PANCREAS 37 In_Frame_Ins Ins - AAC rs34756483 uc003ulg.2 AKAP9_uc003ule.... Hybrid_Cap...
ARFGEF1 p.R1824S 8 68111247 68111247 KP1N_PANCREAS 37 Missense_Mutation SNP T A uc003xxo.1 ARFGEF1_uc003xx... Hybrid_Cap... view
BCR 22 23631813 23631814 KP1N_PANCREAS 37 Intron Ins - C rs66503844 uc002zww.2 BCR_uc002zwx.2_... Hybrid_Cap...
BMP4 p.D319N 14 54417022 54417022 KP1N_PANCREAS 37 Missense_Mutation SNP C T uc001xal.3 BMP4_uc010aoh.2... Hybrid_Cap... view
BTG1 12 92537706 92537707 KP1N_PANCREAS 37 3'UTR Ins - T rs33983967 uc001tby.3 BTG1_uc001tbv.1... Hybrid_Cap...
CARS p.Q695R 11 3028174 3028174 KP1N_PANCREAS 37 Missense_Mutation SNP T C uc001lxf.2 CARS_uc009ydu.2... Hybrid_Cap... view
CDK11B 1 1654066 1654068 KP1N_PANCREAS 37 Intron Del GCG - uc001agv.1 CDK11B_uc001aha... Hybrid_Cap...
CLTCL1 p.V1201_splice 22 19189003 19189004 KP1N_PANCREAS 37 Splice_Site_Ins Ins - C rs11386977 uc002zpb.2 CLTCL1_uc011agv... Hybrid_Cap...
CSNK1G3 p.M150R 5 122911433 122911433 KP1N_PANCREAS 37 Missense_Mutation SNP T G uc003ktl.2 CSNK1G3_uc003kt... Hybrid_Cap... view
CTNNA2 p.R538Q 2 80782890 80782890 KP1N_PANCREAS 37 Missense_Mutation SNP G A uc010ysh.1 CTNNA2_uc010yse... Hybrid_Cap... view
EEF1D 8 144661954 144661955 KP1N_PANCREAS 37 3'UTR Del CT - uc003yyq.1 NAPRT1_uc003yym... Hybrid_Cap...
EIF4E 4 99808137 99808141 KP1N_PANCREAS 37 Intron Del TTAAA - uc011ceb.1 EIF4E_uc011cea.... Hybrid_Cap...
ETV1 7 14028708 14028708 KP1N_PANCREAS 37 5'UTR Del A - rs77190713 uc011jxq.1 ETV1_uc011jxn.1... Hybrid_Cap...
FES p.D528N 15 91434835 91434835 KP1N_PANCREAS 37 Missense_Mutation SNP G A uc002bpv.2 FES_uc010uqj.1_... Hybrid_Cap... view
FGFR1OP 6 167453519 167453520 KP1N_PANCREAS 37 3'UTR Ins - T rs115519488 uc003qvj.2 CCR6_uc003qvl.2... Hybrid_Cap...
FLI1 11 128638217 128638217 KP1N_PANCREAS 37 Intron Del G - uc010sbu.1 FLI1_uc010sbt.1... Hybrid_Cap...
GATS 7 99799079 99799079 KP1N_PANCREAS 37 3'UTR SNP A G uc003uua.3 STAG3_uc010lgs.... Hybrid_Cap... view
GRIA3 X 122318386 122318387 KP1N_PANCREAS 37 Splice_Site_Ins Ins - G rs66632982 uc004etq.3 GRIA3_uc004etr.... Hybrid_Cap...
GUCY2C 12 14827464 14827466 KP1N_PANCREAS 37 Intron Del ATC - rs72525754;rs3083879 uc001rcd.2 GUCY2C_uc009zhz... Hybrid_Cap...
ILK 11 6630029 6630029 KP1N_PANCREAS 37 Intron Del C - uc001mee.2 ILK_uc001mef.2_... Hybrid_Cap...
ITPR2 p.R470_splice 12 26834804 26834805 KP1N_PANCREAS 37 Splice_Site_Ins Ins - ACTC rs66696203;rs59199365 uc001rhg.2 Hybrid_Cap...
KIAA0802 p.G1224R 18 8825178 8825178 KP1N_PANCREAS 37 Missense_Mutation SNP G A uc002knr.2 KIAA0802_uc002k... Hybrid_Cap... view
KRAS p.G12D 12 25398284 25398284 KP1N_PANCREAS 37 Missense_Mutation SNP C T uc001rgp.1 KRAS_uc001rgq.1... Hybrid_Cap... view
LOC100130776 12 58121600 58121600 KP1N_PANCREAS 37 3'UTR SNP A G uc001sps.3 AGAP2_uc001spo.... Hybrid_Cap... view
LRP1B p.T3986N 2 141093343 141093343 KP1N_PANCREAS 37 Missense_Mutation SNP G T uc002tvj.1 Hybrid_Cap... view
MAML3 p.Q767_splice 4 140651585 140651587 KP1N_PANCREAS 37 Splice_Site_Del Del CTG - uc003ihz.1 MGST2_uc010ioi.... Hybrid_Cap...
MAP2K5 p.Q444H 15 68099073 68099073 KP1N_PANCREAS 37 Missense_Mutation SNP G T uc002aqu.2 MAP2K5_uc002aqv... Hybrid_Cap... view
MAP3K1 p.T949del 5 56177849 56177851 KP1N_PANCREAS 37 In_Frame_Del Del CAA - uc003jqw.3 Hybrid_Cap...
MAP3K14 p.R218_splice 17 43364293 43364294 KP1N_PANCREAS 37 Splice_Site_Ins Ins - G rs66766023 uc002iiw.1 MAP3K14_uc010da... Hybrid_Cap...
MAP3K4 p.A1199del 6 161519351 161519353 KP1N_PANCREAS 37 In_Frame_Del Del CTG - uc003qtn.2 MAP3K4_uc010kkc... Hybrid_Cap...
MGC42105 p.K342E 5 43280544 43280544 KP1N_PANCREAS 37 Missense_Mutation SNP A G uc003jno.2 Hybrid_Cap... view
MN1 p.533_533Q>QQ 22 28194933 28194934 KP1N_PANCREAS 37 In_Frame_Ins Ins - TGC rs45480998 uc003adj.2 Hybrid_Cap...
NCAM1 11 112832307 112832308 KP1N_PANCREAS 37 5'UTR Ins - A rs117108942 uc009yyq.1 NCAM1_uc001pno.... Hybrid_Cap...
NCAM1 11 112832340 112832340 KP1N_PANCREAS 37 5'UTR Del C - uc009yyq.1 NCAM1_uc001pno.... Hybrid_Cap...
NCOA1 p.T26P 2 24881622 24881622 KP1N_PANCREAS 37 Missense_Mutation SNP A C uc002rfk.2 NCOA1_uc010eye.... Hybrid_Cap... view
NCOA3 p.Q1276del 20 46279837 46279839 KP1N_PANCREAS 37 In_Frame_Del Del CAG - rs2664555 uc002xtk.2 NCOA3_uc010ght.... Hybrid_Cap...
NEK3 p.K313_splice 13 52718050 52718051 KP1N_PANCREAS 37 Splice_Site_Ins Ins - T rs72514762 uc001vgh.2 NEK3_uc001vgg.2... Hybrid_Cap...
NFIA 1 61921185 61921186 KP1N_PANCREAS 37 3'UTR Ins - T rs57270124;rs76131997 uc010oos.1 NFIA_uc001czy.2... Hybrid_Cap...
NIN p.N1063T 14 51224560 51224560 KP1N_PANCREAS 37 Missense_Mutation SNP T G uc001wyi.2 NIN_uc001wyj.2_... Hybrid_Cap... view
NOTCH4 p.15_16LL>L 6 32191659 32191661 KP1N_PANCREAS 37 In_Frame_Del Del AGC - uc003obb.2 NOTCH4_uc011dpu... Hybrid_Cap...
NOVA1 14 26939509 26939510 KP1N_PANCREAS 37 Intron Ins - A uc001wpy.2 NOVA1_uc001wpz.... Hybrid_Cap...
NR1H2 p.176_177insQ 19 50881820 50881821 KP1N_PANCREAS 37 In_Frame_Ins Ins - AAC rs66783852;rs112359270 uc010enw.2 NR1H2_uc002prv.... Hybrid_Cap...
NUAK2 p.K408N 1 205273241 205273241 KP1N_PANCREAS 37 Missense_Mutation SNP C G uc001hce.2 Hybrid_Cap... view
PCDH15 p.R728I 10 55826569 55826569 KP1N_PANCREAS 37 Missense_Mutation SNP C A uc010qhy.1 PCDH15_uc010qhq... Hybrid_Cap... view
PDE4DIP p.Q1665fs 1 144873963 144873963 KP1N_PANCREAS 37 Frame_Shift_Del Del T - uc001elw.3 NBPF10_uc009wir... Hybrid_Cap...
PLD1 p.L308* 3 171427488 171427488 KP1N_PANCREAS 37 Nonsense_Mutation SNP A T uc003fhs.2 PLD1_uc003fht.2... Hybrid_Cap... view
PMS1 2 190670539 190670540 KP1N_PANCREAS 37 Intron Ins - A rs3214425 uc002urh.3 PMS1_uc010zga.1... Hybrid_Cap...
PRKDC p.L1244fs 8 48805816 48805817 KP1N_PANCREAS 37 Frame_Shift_Ins Ins - G rs67588121 uc003xqi.2 PRKDC_uc003xqj.... Hybrid_Cap...
RECQL4 p.R766fs 8 145738768 145738768 KP1N_PANCREAS 37 Frame_Shift_Del Del G - uc003zdj.2 Hybrid_Cap...
RECQL4 p.P671T 8 145739359 145739359 KP1N_PANCREAS 37 Missense_Mutation SNP G T uc003zdj.2 Hybrid_Cap... view
RGL3 p.L376F 19 11515882 11515882 KP1N_PANCREAS 37 Missense_Mutation SNP G A uc002mro.2 RGL3_uc002mrn.2... Hybrid_Cap... view
RIMS2 p.H236N 8 104898199 104898199 KP1N_PANCREAS 37 Missense_Mutation SNP C A uc003yls.2 RIMS2_uc003ylp.... Hybrid_Cap... view
RIMS2 p.A407S 8 104927795 104927795 KP1N_PANCREAS 37 Missense_Mutation SNP G T uc003yls.2 RIMS2_uc003ylp.... Hybrid_Cap... view
ROR1 1 64608366 64608366 KP1N_PANCREAS 37 Intron SNP A G uc001dbj.2 ROR1_uc001dbi.3... Hybrid_Cap... view
RPS6KA5 14 91360733 91360734 KP1N_PANCREAS 37 Intron Ins - T rs77438853 uc001xys.2 RPS6KA5_uc010tw... Hybrid_Cap...
RPTOR p.I222V 17 78727819 78727819 KP1N_PANCREAS 37 Missense_Mutation SNP A G uc002jyt.1 RPTOR_uc002jys.... Hybrid_Cap... view
SEPT9 p.I112V 17 75398398 75398398 KP1N_PANCREAS 37 Missense_Mutation SNP A G uc002jts.3 SEPT9_uc010wtk.... Hybrid_Cap... view
STAR p.E99V 8 38005728 38005728 KP1N_PANCREAS 37 Missense_Mutation SNP T A uc003xkv.1 STAR_uc010lwc.1... Hybrid_Cap... view
STK31 7 23872024 23872025 KP1N_PANCREAS 37 3'UTR Ins - TTTG rs66787534 uc003sws.3 STK31_uc003swt.... Hybrid_Cap...
TLK1 2 171850178 171850179 KP1N_PANCREAS 37 3'UTR Ins - AA rs71008739 uc002ugo.2 TLK1_uc002ugn.2... Hybrid_Cap...
TRIM33 1 114940215 114940216 KP1N_PANCREAS 37 3'UTR Ins - G rs68133208 uc001eew.2 TRIM33_uc010owr... Hybrid_Cap...
TRPM6 p.R531I 9 77422996 77422996 KP1N_PANCREAS 37 Missense_Mutation SNP C A uc004ajl.1 TRPM6_uc004ajk.... Hybrid_Cap... view
TRPS1 8 116635872 116635873 KP1N_PANCREAS 37 5'UTR Ins - A rs76893349 uc003yny.2 TRPS1_uc011lhy.... Hybrid_Cap...
TTN p.V33227A 2 179392469 179392469 KP1N_PANCREAS 37 Missense_Mutation SNP A G uc010zfg.1 TTN_uc010zfh.1_... Hybrid_Cap... view
VEGFC p.S419_splice 4 177605082 177605084 KP1N_PANCREAS 37 Splice_Site_Del Del TCA - uc003ius.1 Hybrid_Cap...
YSK4 2 135782247 135782247 KP1N_PANCREAS 37 5'UTR SNP A G uc002tue.1 YSK4_uc010fne.1... Hybrid_Cap... view