Annotation Summary for Cell Line: LCLC-103H  

Cell line primary name: LCLC-103H
Cell line aliases:
Gender: M
Site Primary: lung
Histology: carcinoma
Hist Subtype1: large_cell_carcinoma
Notes:
Source: DSMZ
Expression arrays: WATCH_p_NCLE_RNA8_HG-U133_Plus_2_E02_474726
SNP arrays: CHARY_p_NCLE_DNAAffy9_GenomeWideSNP_6_G07_490368
Oncomap: yes
Hybrid Capture Sequencing: yes


Mutations in LCLC-103H

GeneProtein
Change
ChrStartEnd SampleNCBI
Build
Variant
Classification
Variant TypeReference
Allele
Tumor
Allele 1
dbSNP IDAnnotation
Transcript
Other
Transcripts
Method View
Reads
Mutation
Assessor
AAK1 p.541_542QQ>Q 2 69741754 69741756 LCLC103H_LUNG 37 In_Frame_Del Del TGT - rs55712143 uc002sfp.2 AAK1_uc010fdk.2... Hybrid_Cap...
ADAM28 8 24211994 24211997 LCLC103H_LUNG 37 3'UTR Del CTAT - rs10610134 uc003xdy.2 ADAM28_uc011laa... Hybrid_Cap...
ADAM29 p.L691del 4 175898744 175898746 LCLC103H_LUNG 37 In_Frame_Del Del TTA - uc003iuc.2 ADAM29_uc003iud... Hybrid_Cap...
AKAP12 p.1531_1532insE 6 151674116 151674117 LCLC103H_LUNG 37 In_Frame_Ins Ins - GAG rs34737819 uc011eep.1 AKAP12_uc003qoe... Hybrid_Cap...
ALPK2 p.F1119L 18 56204064 56204064 LCLC103H_LUNG 37 Missense_Mutation SNP A G uc002lhj.3 ALPK2_uc002lhk.... Hybrid_Cap... view
ASTN1 p.S605C 1 176926888 176926888 LCLC103H_LUNG 37 Missense_Mutation SNP T A uc001glc.2 ASTN1_uc001glb.... Hybrid_Cap... view
ATM p.N2826I 11 108216528 108216528 LCLC103H_LUNG 37 Missense_Mutation SNP A T uc001pkb.1 ATM_uc009yxr.1_... Hybrid_Cap... view
ATP11A p.R70S 13 113459318 113459318 LCLC103H_LUNG 37 Missense_Mutation SNP A T uc001vsj.3 ATP11A_uc001vsi... Hybrid_Cap... view
BCR 22 23631813 23631814 LCLC103H_LUNG 37 Intron Ins - C rs66503844 uc002zww.2 BCR_uc002zwx.2_... Hybrid_Cap...
CATSPERB p.H1025L 14 92053604 92053604 LCLC103H_LUNG 37 Missense_Mutation SNP T A uc001xzs.1 CATSPERB_uc010a... Hybrid_Cap... view
CDK11B 1 1654066 1654068 LCLC103H_LUNG 37 Intron Del GCG - uc001agv.1 CDK11B_uc001aha... Hybrid_Cap...
CDK12 p.S1026C 17 37676321 37676321 LCLC103H_LUNG 37 Missense_Mutation SNP A T uc010cvv.2 CDK12_uc010wef.... Hybrid_Cap... view
CLTCL1 p.V1201_splice 22 19189003 19189004 LCLC103H_LUNG 37 Splice_Site_Ins Ins - C rs11386977 uc002zpb.2 CLTCL1_uc011agv... Hybrid_Cap...
CNBP 3 128889258 128889258 LCLC103H_LUNG 37 3'UTR SNP C A uc003elq.3 CNBP_uc003elr.3... Hybrid_Cap... view
CNTN6 3 1339681 1339686 LCLC103H_LUNG 37 Intron Del GTTTT... - uc003boz.2 CNTN6_uc010hbo.... Hybrid_Cap...
CNTN6 p.N346K 3 1367590 1367590 LCLC103H_LUNG 37 Missense_Mutation SNP C G uc003boz.2 CNTN6_uc011asj.... Hybrid_Cap... view
COL14A1 p.E397Q 8 121219331 121219331 LCLC103H_LUNG 37 Missense_Mutation SNP G C uc003yox.2 COL14A1_uc003yo... Hybrid_Cap... view
COL3A1 p.S1395* 2 189875546 189875546 LCLC103H_LUNG 37 Nonsense_Mutation SNP C A uc002uqj.1 Hybrid_Cap... view
CTNNB1 3 41275937 41275937 LCLC103H_LUNG 37 Intron SNP T A uc010hia.1 CTNNB1_uc003ckp... Hybrid_Cap... view
CXCR7 p.S360R 2 237490188 237490188 LCLC103H_LUNG 37 Missense_Mutation SNP C A uc010fyq.2 CXCR7_uc002vwd.... Hybrid_Cap... view
DACH1 13 72014626 72014626 LCLC103H_LUNG 37 3'UTR Del T - uc010thn.1 DACH1_uc010tho.... Hybrid_Cap...
DYRK1A 21 38884966 38884967 LCLC103H_LUNG 37 3'UTR Ins - T rs72430212 uc002ywk.2 DYRK1A_uc002ywi... Hybrid_Cap...
EPHA3 p.D577Y 3 89457248 89457248 LCLC103H_LUNG 37 Missense_Mutation SNP G T uc003dqy.2 EPHA3_uc010hon.... Hybrid_Cap... view
EPHA3 p.P694L 3 89478262 89478262 LCLC103H_LUNG 37 Missense_Mutation SNP C T uc003dqy.2 EPHA3_uc010hon.... Hybrid_Cap... view
EPHA4 p.A331T 2 222347399 222347399 LCLC103H_LUNG 37 Missense_Mutation SNP C T uc002vmq.2 EPHA4_uc002vmr.... Hybrid_Cap... view
EPHB1 p.D577H 3 134885818 134885818 LCLC103H_LUNG 37 Missense_Mutation SNP G C uc003eqt.2 EPHB1_uc003equ.... Hybrid_Cap... view
ETV1 7 14028708 14028708 LCLC103H_LUNG 37 5'UTR Del A - rs77190713 uc011jxq.1 ETV1_uc011jxn.1... Hybrid_Cap...
EXT1 8 118811807 118811807 LCLC103H_LUNG 37 3'UTR Del T - uc003yok.1 Hybrid_Cap...
FGFR1OP 6 167453519 167453520 LCLC103H_LUNG 37 3'UTR Ins - T rs115519488 uc003qvj.2 CCR6_uc003qvl.2... Hybrid_Cap...
FLI1 11 128638217 128638217 LCLC103H_LUNG 37 Intron Del G - uc010sbu.1 FLI1_uc010sbt.1... Hybrid_Cap...
FN1 2 216244182 216244185 LCLC103H_LUNG 37 Intron Del GTAC - uc002vfa.2 FN1_uc002vfb.2_... Hybrid_Cap...
GLI1 p.G434C 12 57861999 57861999 LCLC103H_LUNG 37 Missense_Mutation SNP G T uc001snx.2 GLI1_uc009zpq.2... Hybrid_Cap... view
GNAS 20 57473922 57473922 LCLC103H_LUNG 37 Intron SNP G C uc002xzw.2 GNAS_uc002xzt.2... Hybrid_Cap... view
GRIA3 X 122318386 122318387 LCLC103H_LUNG 37 Splice_Site_Ins Ins - G rs66632982 uc004etq.3 GRIA3_uc004etr.... Hybrid_Cap...
GUCY2C 12 14827464 14827466 LCLC103H_LUNG 37 Intron Del ATC - rs72525754;rs3083879 uc001rcd.2 GUCY2C_uc009zhz... Hybrid_Cap...
GUCY2C p.L323F 12 14827676 14827676 LCLC103H_LUNG 37 Missense_Mutation SNP G A uc001rcd.2 GUCY2C_uc009zhz... Hybrid_Cap... view
HNF1A 12 121434630 121434631 LCLC103H_LUNG 37 Intron Ins - TCATTCAT rs75100977 uc010szn.1 HNF1A_uc001tze.... Hybrid_Cap...
HOXA13 p.G322A 7 27238019 27238019 LCLC103H_LUNG 37 Missense_Mutation SNP C G uc003szb.1 Hybrid_Cap... view
HOXD11 p.N335I 2 176973857 176973857 LCLC103H_LUNG 37 Missense_Mutation SNP A T uc002uki.2 HOXD11_uc010fqx... Hybrid_Cap... view
IL17RD p.P306A 3 57136570 57136570 LCLC103H_LUNG 37 Missense_Mutation SNP G C uc003dil.2 IL17RD_uc003dik... Hybrid_Cap... view
ILK 11 6630029 6630029 LCLC103H_LUNG 37 Intron Del C - uc001mee.2 ILK_uc001mef.2_... Hybrid_Cap...
ITPR2 p.R470_splice 12 26834804 26834805 LCLC103H_LUNG 37 Splice_Site_Ins Ins - ACTC rs66696203;rs59199365 uc001rhg.2 Hybrid_Cap...
KALRN p.D2331Y 3 124393259 124393259 LCLC103H_LUNG 37 Missense_Mutation SNP G T uc003ehg.2 KALRN_uc003ehi.... Hybrid_Cap... view
KDR p.H1004N 4 55958843 55958843 LCLC103H_LUNG 37 Missense_Mutation SNP G T uc003has.2 KDR_uc003hat.1_... Hybrid_Cap... view
LETM2 8 38265796 38265798 LCLC103H_LUNG 37 3'UTR Del ACT - uc003xlm.1 LETM2_uc003xll.... Hybrid_Cap...
LRP1B p.G1315V 2 141643727 141643727 LCLC103H_LUNG 37 Missense_Mutation SNP C A uc002tvj.1 LRP1B_uc010fnl.... Hybrid_Cap... view
MAF 16 79628537 79628537 LCLC103H_LUNG 37 Intron Del T - uc002ffm.2 MAF_uc002ffn.2_... Hybrid_Cap...
MAML2 11 95712002 95712002 LCLC103H_LUNG 37 3'UTR SNP T G uc001pfw.1 Hybrid_Cap... view
MAML3 p.Q767_splice 4 140651585 140651587 LCLC103H_LUNG 37 Splice_Site_Del Del CTG - uc003ihz.1 MGST2_uc010ioi.... Hybrid_Cap...
MAP3K1 p.T949del 5 56177849 56177851 LCLC103H_LUNG 37 In_Frame_Del Del CAA - uc003jqw.3 Hybrid_Cap...
MAP3K14 p.R218_splice 17 43364293 43364294 LCLC103H_LUNG 37 Splice_Site_Ins Ins - G rs66766023 uc002iiw.1 MAP3K14_uc010da... Hybrid_Cap...
MAPK14 6 36076345 36076354 LCLC103H_LUNG 37 3'UTR Del GTGTG... - rs80147786 uc003olp.2 MAPK14_uc003olq... Hybrid_Cap...
MAPK4 p.A390A 18 48255630 48255630 LCLC103H_LUNG 37 Silent SNP T A uc002lev.2 MAPK4_uc010xdm.... Hybrid_Cap... view
MAPKAPK3 3 50685575 50685575 LCLC103H_LUNG 37 3'UTR Del A - rs76026164 uc003day.1 MAPKAPK3_uc003d... Hybrid_Cap...
MMP20 p.D183Y 11 102480738 102480738 LCLC103H_LUNG 37 Missense_Mutation SNP C A uc001phc.2 Hybrid_Cap... view
NACA p.A1833T 12 57109817 57109817 LCLC103H_LUNG 37 Missense_Mutation SNP C T uc009zoy.1 NACA_uc001slz.2... Hybrid_Cap... view
NCAM1 11 112832307 112832308 LCLC103H_LUNG 37 5'UTR Ins - A rs117108942 uc009yyq.1 NCAM1_uc001pno.... Hybrid_Cap...
NCAM1 11 112832340 112832340 LCLC103H_LUNG 37 5'UTR Del C - uc009yyq.1 NCAM1_uc001pno.... Hybrid_Cap...
NCOA3 p.Q1276del 20 46279864 46279866 LCLC103H_LUNG 37 In_Frame_Del Del CAA - rs1132443;rs28529067 uc002xtk.2 NCOA3_uc010ght.... Hybrid_Cap...
NEK3 p.K313_splice 13 52718050 52718051 LCLC103H_LUNG 37 Splice_Site_Ins Ins - T rs72514762 uc001vgh.2 NEK3_uc001vgg.2... Hybrid_Cap...
NF1 p.Q786Q 17 29554573 29554573 LCLC103H_LUNG 37 Silent SNP A G uc002hgg.2 NF1_uc002hgh.2_... Hybrid_Cap... view
NF1 p.K918* 17 29556385 29556385 LCLC103H_LUNG 37 Nonsense_Mutation SNP A T uc002hgg.2 NF1_uc002hgh.2_... Hybrid_Cap... view
NF1 p.Q1835* 17 29654751 29654751 LCLC103H_LUNG 37 Nonsense_Mutation SNP C T uc002hgg.2 NF1_uc002hgh.2_... Hybrid_Cap... view
NLRP3 p.N1011I 1 247611727 247611727 LCLC103H_LUNG 37 Missense_Mutation SNP A T uc001icr.2 NLRP3_uc001ics.... Hybrid_Cap... view
NPR1 p.A1002D 1 153662832 153662832 LCLC103H_LUNG 37 Missense_Mutation SNP C A uc001fcs.3 NPR1_uc010pdz.1... Hybrid_Cap... view
NPR1 1 153665919 153665920 LCLC103H_LUNG 37 3'UTR Ins - C rs66682713 uc001fcs.3 NPR1_uc010pdz.1... Hybrid_Cap...
NR1H2 p.176_177insQ 19 50881820 50881821 LCLC103H_LUNG 37 In_Frame_Ins Ins - AAC rs66783852;rs112359270 uc010enw.2 NR1H2_uc002prv.... Hybrid_Cap...
NRBP1 2 27664755 27664755 LCLC103H_LUNG 37 3'UTR SNP C A uc002rko.2 NRBP1_uc002rkq.... Hybrid_Cap... view
OBSCN p.G2058V 1 228463680 228463680 LCLC103H_LUNG 37 Missense_Mutation SNP G T uc009xez.1 OBSCN_uc001hsn.... Hybrid_Cap... view
PAX3 2 223066017 223066018 LCLC103H_LUNG 37 Intron Ins - C rs115619343 uc002vmt.1 PAX3_uc002vmy.1... Hybrid_Cap...
PAX3 2 223158653 223158653 LCLC103H_LUNG 37 Intron Del T - rs112753212 uc002vmt.1 PAX3_uc002vmy.1... Hybrid_Cap...
PDE4DIP p.Q1665fs 1 144873963 144873963 LCLC103H_LUNG 37 Frame_Shift_Del Del T - uc001elw.3 NBPF10_uc009wir... Hybrid_Cap...
PDGFRA 4 55130995 55130995 LCLC103H_LUNG 37 Intron SNP T G uc003han.3 PDGFRA_uc003haa... Hybrid_Cap... view
PGR 11 100933598 100933599 LCLC103H_LUNG 37 Intron Ins - AATGA rs35148438 uc001pgh.2 PGR_uc001pgg.2_... Hybrid_Cap...
PPP3CC 8 22398330 22398330 LCLC103H_LUNG 37 3'UTR SNP G A uc011kzi.1 PPP3CC_uc003xbs... Hybrid_Cap... view
PRKDC p.L1244fs 8 48805816 48805817 LCLC103H_LUNG 37 Frame_Shift_Ins Ins - G rs67588121 uc003xqi.2 PRKDC_uc003xqj.... Hybrid_Cap...
RAD50 p.R224H 5 131915673 131915673 LCLC103H_LUNG 37 Missense_Mutation SNP G A rs28903088 uc003kxi.2 RAD50_uc003kxg.... Hybrid_Cap... view
RASGRF2 p.K189E 5 80366332 80366332 LCLC103H_LUNG 37 Missense_Mutation SNP A G uc003kha.1 RASGRF2_uc011ct... Hybrid_Cap... view
RECQL4 p.R766fs 8 145738768 145738768 LCLC103H_LUNG 37 Frame_Shift_Del Del G - uc003zdj.2 Hybrid_Cap...
RPS6 9 19379773 19379773 LCLC103H_LUNG 37 Intron SNP A G uc003znv.1 RPS6_uc003znu.1... Hybrid_Cap... view
RPS6KL1 14 75373626 75373627 LCLC103H_LUNG 37 3'UTR Ins - TGAT uc001xqx.1 RPS6KL1_uc001xq... Hybrid_Cap...
RXRA p.H288R 9 137313604 137313604 LCLC103H_LUNG 37 Missense_Mutation SNP A G uc004cfb.2 RXRA_uc004cfc.1... Hybrid_Cap... view
SEPT9 p.E489Q 17 75488787 75488787 LCLC103H_LUNG 37 Missense_Mutation SNP G C uc002jts.3 SEPT9_uc010wtk.... Hybrid_Cap... view
STAT5A 17 40462797 40462798 LCLC103H_LUNG 37 3'UTR Del TG - uc002hzj.1 STAT5A_uc010cya... Hybrid_Cap...
TCF21 6 134210497 134210498 LCLC103H_LUNG 37 5'UTR Ins - TCTC rs35199378 uc003qei.3 TCF21_uc003qej.... Hybrid_Cap...
TEC 4 48139307 48139310 LCLC103H_LUNG 37 3'UTR Del TTAT - rs79098351 uc003gxz.2 Hybrid_Cap...
TLK1 2 171850178 171850179 LCLC103H_LUNG 37 3'UTR Ins - AA rs71008739 uc002ugo.2 TLK1_uc002ugn.2... Hybrid_Cap...
TP53 p.V216L 17 7578203 7578203 LCLC103H_LUNG 37 Missense_Mutation SNP C A uc002gim.2 TP53_uc002gig.1... Hybrid_Cap... view
TRIM33 1 114940215 114940216 LCLC103H_LUNG 37 3'UTR Ins - G rs68133208 uc001eew.2 TRIM33_uc010owr... Hybrid_Cap...
TRPS1 8 116635872 116635873 LCLC103H_LUNG 37 5'UTR Ins - A rs76893349 uc003yny.2 TRPS1_uc011lhy.... Hybrid_Cap...
TTK p.S162I 6 80720546 80720546 LCLC103H_LUNG 37 Missense_Mutation SNP G T uc003pjc.2 TTK_uc003pjb.3_... Hybrid_Cap... view
TTN 2 179391639 179391640 LCLC103H_LUNG 37 3'UTR Ins - T rs36037175 uc010zfg.1 TTN_uc010zfh.1_... Hybrid_Cap...
TTN p.P20656L 2 179441300 179441300 LCLC103H_LUNG 37 Missense_Mutation SNP G A uc010zfg.1 TTN_uc010zfh.1_... Hybrid_Cap... view
ULK4 p.L465* 3 41938450 41938450 LCLC103H_LUNG 37 Nonsense_Mutation SNP A T uc003ckv.3 ULK4_uc003ckw.2... Hybrid_Cap... view
VEGFC p.S419_splice 4 177605082 177605084 LCLC103H_LUNG 37 Splice_Site_Del Del TCA - uc003ius.1 Hybrid_Cap...
ZNF521 p.S1236T 18 22671998 22671998 LCLC103H_LUNG 37 Missense_Mutation SNP A T uc002kvk.2 ZNF521_uc010xbe... Hybrid_Cap... view