Annotation Summary for Cell Line: LOU-NH91  

Cell line primary name: LOU-NH91
Cell line aliases:
Gender: F
Site Primary: lung
Histology: carcinoma
Hist Subtype1: squamous_cell_carcinoma
Notes:
Source: DSMZ
Expression arrays: METIS_p_NCLE_RNA1_Human_U133_Plus_2.0_D09_240938
SNP arrays: LIMPS_p_NCLE_DNA2N_GenomeWideSNP_6_B04_246640
Oncomap: yes
Hybrid Capture Sequencing: yes


Mutations in LOU-NH91

GeneProtein
Change
ChrStartEnd SampleNCBI
Build
Variant
Classification
Variant TypeReference
Allele
Tumor
Allele 1
dbSNP IDAnnotation
Transcript
Other
Transcripts
Method View
Reads
Mutation
Assessor
ADAM28 8 24211994 24211997 LOUNH91_LUNG 37 3'UTR Del CTAT - rs10610134 uc003xdy.2 ADAM28_uc011laa... Hybrid_Cap...
ADAM29 p.L691del 4 175898744 175898746 LOUNH91_LUNG 37 In_Frame_Del Del TTA - uc003iuc.2 ADAM29_uc003iud... Hybrid_Cap...
ADCK1 p.R81H 14 78325441 78325441 LOUNH91_LUNG 37 Missense_Mutation SNP G A uc001xui.2 ADCK1_uc010tvo.... Hybrid_Cap... view
AFF4 p.P890L 5 132224834 132224834 LOUNH91_LUNG 37 Missense_Mutation SNP G A uc003kyd.2 AFF4_uc011cxk.1... Hybrid_Cap... view
AKAP12 p.1531_1532insE 6 151674116 151674117 LOUNH91_LUNG 37 In_Frame_Ins Ins - GAG rs34737819 uc011eep.1 AKAP12_uc003qoe... Hybrid_Cap...
AKAP9 p.E673K 7 91631248 91631248 LOUNH91_LUNG 37 Missense_Mutation SNP G A uc003ulg.2 AKAP9_uc003ule.... Hybrid_Cap... view
ASPH p.A264_splice 8 62550924 62550925 LOUNH91_LUNG 37 Splice_Site_Ins Ins - A rs5891816 uc003xuj.2 ASPH_uc011leg.1... Hybrid_Cap...
AURKC 19 57742494 57742507 LOUNH91_LUNG 37 5'UTR Del GGACG... - rs67926438;rs112039303;rs59094959 uc002qoe.2 AURKC_uc002qoc.... Hybrid_Cap...
BMP2K p.QQQQ482del 4 79792137 79792148 LOUNH91_LUNG 37 In_Frame_Del Del CAGCA... - rs17855588 uc003hlk.2 BMP2K_uc010ijl.... Hybrid_Cap...
CACNB2 10 18828721 18828722 LOUNH91_LUNG 37 3'UTR Ins - AA rs3841459 uc001ipr.2 CACNB2_uc009xjz... Hybrid_Cap...
CASP4 11 104819546 104819547 LOUNH91_LUNG 37 Intron Ins - AGACACAC rs33910737;rs113139978 uc001pid.1 CASP4_uc001pib.... Hybrid_Cap...
CCR1 p.A31V 3 46245713 46245713 LOUNH91_LUNG 37 Missense_Mutation SNP G A uc003cph.1 CCR3_uc003cpg.1... Hybrid_Cap... view
CDK11B 1 1654066 1654068 LOUNH91_LUNG 37 Intron Del GCG - uc001agv.1 CDK11B_uc001aha... Hybrid_Cap...
CHD9 p.2164_2165SS>S 16 53338410 53338412 LOUNH91_LUNG 37 In_Frame_Del Del TTC - uc002ehb.2 CHD9_uc002egy.2... Hybrid_Cap...
CLTC p.E848K 17 57752173 57752173 LOUNH91_LUNG 37 Missense_Mutation SNP G A uc002ixr.1 CLTC_uc002ixp.2... Hybrid_Cap... view
CLTCL1 p.V1201_splice 22 19189003 19189004 LOUNH91_LUNG 37 Splice_Site_Ins Ins - C rs11386977 uc002zpb.2 CLTCL1_uc011agv... Hybrid_Cap...
CREB3L2 p.T100del 7 137612914 137612916 LOUNH91_LUNG 37 In_Frame_Del Del TGG - uc003vtw.2 CREB3L2_uc003vt... Hybrid_Cap...
CTBP2 p.K974fs 10 126678123 126678123 LOUNH91_LUNG 37 Frame_Shift_Del Del T - uc001lie.3 CTBP2_uc009yak.... Hybrid_Cap...
CYP1B1 2 38297747 38297747 LOUNH91_LUNG 37 3'UTR SNP G C rs1799885 uc002rqo.2 Hybrid_Cap... view
DACH1 p.P496Q 13 72131239 72131239 LOUNH91_LUNG 37 Missense_Mutation SNP G T uc010thn.1 DACH1_uc010tho.... Hybrid_Cap... view
DACH1 p.488_489NQ>KK 13 72131261 72131262 LOUNH91_LUNG 37 Missense_Mutation DNP GG TT uc010thn.1 DACH1_uc010tho.... Hybrid_Cap...
EGFR p.A755D 7 55242494 55242494 LOUNH91_LUNG 37 Missense_Mutation SNP C A uc003tqk.2 EGFR_uc010kzg.1... Hybrid_Cap... view
EIF2AK4 p.F933L 15 40289197 40289197 LOUNH91_LUNG 37 Missense_Mutation SNP C G uc001zkm.1 EIF2AK4_uc010bb... Hybrid_Cap... view
EIF4E 4 99808137 99808141 LOUNH91_LUNG 37 Intron Del TTAAA - uc011ceb.1 EIF4E_uc011cea.... Hybrid_Cap...
EIF4G1 p.GEA479del 3 184039767 184039775 LOUNH91_LUNG 37 In_Frame_Del Del AGGAG... - uc010hxx.2 EIF4G1_uc003fno... Hybrid_Cap...
ELN p.G216V 7 73462008 73462008 LOUNH91_LUNG 37 Missense_Mutation SNP G T uc003tzw.2 RFC2_uc011kfa.1... Hybrid_Cap... view
EP300 p.Q476* 22 41527535 41527535 LOUNH91_LUNG 37 Nonsense_Mutation SNP C T uc003azl.3 Hybrid_Cap... view
EPHA6 3 97367230 97367231 LOUNH91_LUNG 37 Intron Ins - A rs115253553 uc010how.1 EPHA6_uc003drs.... Hybrid_Cap...
EPHB6 7 142568771 142568771 LOUNH91_LUNG 37 3'UTR Del C - uc011kst.1 EPHB6_uc011ksu.... Hybrid_Cap...
EPS15 1 51822189 51822189 LOUNH91_LUNG 37 3'UTR Del A - uc001csq.1 EPS15_uc009vyz.... Hybrid_Cap...
ETV1 7 14028708 14028708 LOUNH91_LUNG 37 5'UTR Del A - rs77190713 uc011jxq.1 ETV1_uc011jxn.1... Hybrid_Cap...
FAM123B p.Q991H X 63410194 63410194 LOUNH91_LUNG 37 Missense_Mutation SNP C A uc004dvo.2 Hybrid_Cap... view
FANCB X 14861554 14861554 LOUNH91_LUNG 37 3'UTR SNP C A uc004cwg.1 FANCB_uc004cwh.... Hybrid_Cap... view
FBN1 p.S1349T 15 48766766 48766766 LOUNH91_LUNG 37 Missense_Mutation SNP C G uc001zwx.1 Hybrid_Cap... view
FGFR1OP 6 167453519 167453520 LOUNH91_LUNG 37 3'UTR Ins - T rs115519488 uc003qvj.2 CCR6_uc003qvl.2... Hybrid_Cap...
FGFR3 4 1809128 1809129 LOUNH91_LUNG 37 3'UTR Del GT - uc003gdu.2 FGFR3_uc003gdr.... Hybrid_Cap...
FLI1 11 128638217 128638217 LOUNH91_LUNG 37 Intron Del G - uc010sbu.1 FLI1_uc010sbt.1... Hybrid_Cap...
FLNB p.T2547N 3 58155446 58155446 LOUNH91_LUNG 37 Missense_Mutation SNP C A uc010hne.2 FLNB_uc003djj.2... Hybrid_Cap... view
FN1 2 216244182 216244185 LOUNH91_LUNG 37 Intron Del GTAC - uc002vfa.2 FN1_uc002vfb.2_... Hybrid_Cap...
GPR112 p.D2657del X 135474445 135474447 LOUNH91_LUNG 37 In_Frame_Del Del GAT - rs3030295 uc004ezu.1 GPR112_uc010nsb... Hybrid_Cap...
GPR112 p.T3045P X 135496414 135496414 LOUNH91_LUNG 37 Missense_Mutation SNP A C uc004ezu.1 GPR112_uc010nsb... Hybrid_Cap... view
GRIA3 X 122318386 122318387 LOUNH91_LUNG 37 Splice_Site_Ins Ins - G rs66632982 uc004etq.3 GRIA3_uc004etr.... Hybrid_Cap...
GUCY2C 12 14827464 14827466 LOUNH91_LUNG 37 Intron Del ATC - rs72525754;rs3083879 uc001rcd.2 GUCY2C_uc009zhz... Hybrid_Cap...
GUCY2C 12 14849502 14849502 LOUNH91_LUNG 37 5'UTR SNP C T uc001rcd.2 GUCY2C_uc009zhz... Hybrid_Cap... view
HNF1A 12 121434630 121434631 LOUNH91_LUNG 37 Intron Ins - TCATTCAT rs75100977 uc010szn.1 HNF1A_uc001tze.... Hybrid_Cap...
IL21R 16 27460780 27460781 LOUNH91_LUNG 37 3'UTR Del TG - uc002doq.1 IL21R_uc002dor.... Hybrid_Cap...
ILK 11 6630029 6630029 LOUNH91_LUNG 37 Intron Del C - uc001mee.2 ILK_uc001mef.2_... Hybrid_Cap...
LATS2 p.L77fs 13 21619935 21619935 LOUNH91_LUNG 37 Frame_Shift_Del Del C - uc009zzs.2 LATS2_uc001unr.... Hybrid_Cap...
LMNA 1 156109095 156109095 LOUNH91_LUNG 37 3'UTR Del A - uc001fni.2 LMNA_uc001fnh.2... Hybrid_Cap...
MAML2 p.604_607QQQQ>Q 11 95825375 95825383 LOUNH91_LUNG 37 In_Frame_Del Del TGCTG... - rs113349418 uc001pfw.1 Hybrid_Cap...
MAML3 p.Q767_splice 4 140651585 140651587 LOUNH91_LUNG 37 Splice_Site_Del Del CTG - uc003ihz.1 MGST2_uc010ioi.... Hybrid_Cap...
MAP2K6 17 67516353 67516353 LOUNH91_LUNG 37 Intron SNP A T rs77138194 uc002jij.2 MAP2K6_uc002jii... Hybrid_Cap... view
MAPKAPK3 3 50685575 50685575 LOUNH91_LUNG 37 3'UTR Del A - rs76026164 uc003day.1 MAPKAPK3_uc003d... Hybrid_Cap...
MGA p.V730_splice 15 41991358 41991358 LOUNH91_LUNG 37 Splice_Site_SNP SNP G A uc010ucy.1 MGA_uc001zog.1_... Hybrid_Cap... view
MYST4 p.D1346Y 10 76788618 76788618 LOUNH91_LUNG 37 Missense_Mutation SNP G T uc001jwn.1 MYST4_uc001jwo.... Hybrid_Cap... view
NCAM1 11 112832307 112832308 LOUNH91_LUNG 37 5'UTR Ins - A rs117108942 uc009yyq.1 NCAM1_uc001pno.... Hybrid_Cap...
NCAM1 11 112832340 112832340 LOUNH91_LUNG 37 5'UTR Del C - uc009yyq.1 NCAM1_uc001pno.... Hybrid_Cap...
NEK3 p.K313_splice 13 52718050 52718051 LOUNH91_LUNG 37 Splice_Site_Ins Ins - T rs72514762 uc001vgh.2 NEK3_uc001vgg.2... Hybrid_Cap...
NF2 p.F256fs 22 30057286 30057286 LOUNH91_LUNG 37 Frame_Shift_Del Del C - uc003age.3 NF2_uc003afy.3_... Hybrid_Cap...
NFIA 1 61921185 61921186 LOUNH91_LUNG 37 3'UTR Ins - T rs57270124;rs76131997 uc010oos.1 NFIA_uc001czy.2... Hybrid_Cap...
NLRP10 11 7985049 7985049 LOUNH91_LUNG 37 5'UTR SNP C A uc001mfv.1 Hybrid_Cap... view
NR1H2 p.176_177insQ 19 50881820 50881821 LOUNH91_LUNG 37 In_Frame_Ins Ins - AAC rs66783852;rs112359270 uc010enw.2 NR1H2_uc002prv.... Hybrid_Cap...
PAX3 2 223158653 223158653 LOUNH91_LUNG 37 Intron Del T - rs112753212 uc002vmt.1 PAX3_uc002vmy.1... Hybrid_Cap...
PDGFRA 4 55131002 55131002 LOUNH91_LUNG 37 Intron Del A - uc003han.3 PDGFRA_uc003haa... Hybrid_Cap...
PIK3C2G p.P129del 12 18435399 18435401 LOUNH91_LUNG 37 In_Frame_Del Del CCC - uc010sib.1 PIK3C2G_uc001rd... Hybrid_Cap...
PIK3CA p.E726K 3 178938934 178938934 LOUNH91_LUNG 37 Missense_Mutation SNP G A uc003fjk.2 Hybrid_Cap... view
PLK2 p.G587V 5 57750844 57750844 LOUNH91_LUNG 37 Missense_Mutation SNP C A uc003jrn.2 Hybrid_Cap... view
PLK3 1 45271509 45271509 LOUNH91_LUNG 37 3'UTR SNP T C uc001cmn.2 PLK3_uc001cmo.2... Hybrid_Cap... view
PREX2 p.Y507F 8 68984756 68984756 LOUNH91_LUNG 37 Missense_Mutation SNP A T uc003xxv.1 PREX2_uc003xxu.... Hybrid_Cap... view
PRKDC p.L1244fs 8 48805816 48805817 LOUNH91_LUNG 37 Frame_Shift_Ins Ins - G rs67588121 uc003xqi.2 PRKDC_uc003xqj.... Hybrid_Cap...
SLC6A8 X 152957656 152957657 LOUNH91_LUNG 37 Intron Ins - A uc004fib.3 SLC6A8_uc004fic... Hybrid_Cap...
SLC6A8 p.T550S X 152960226 152960226 LOUNH91_LUNG 37 Missense_Mutation SNP C G uc004fib.3 SLC6A8_uc004fic... Hybrid_Cap... view
SMURF2 17 62541835 62541835 LOUNH91_LUNG 37 3'UTR Del A - uc002jep.1 SMURF2_uc002jeq... Hybrid_Cap...
SORL1 11 121500400 121500400 LOUNH91_LUNG 37 3'UTR SNP C A rs73020651 uc001pxx.2 SORL1_uc010rzp.... Hybrid_Cap... view
STK31 7 23872024 23872025 LOUNH91_LUNG 37 3'UTR Ins - TTTG rs66787534 uc003sws.3 STK31_uc003swt.... Hybrid_Cap...
STRADA 17 61781331 61781332 LOUNH91_LUNG 37 Intron Ins - AGAACC rs66701913 uc002jbm.2 STRADA_uc002jbn... Hybrid_Cap...
TAOK3 12 118588761 118588762 LOUNH91_LUNG 37 3'UTR Ins - TT rs116872184 uc001twx.2 TAOK3_uc001twv.... Hybrid_Cap...
TCF21 6 134210497 134210498 LOUNH91_LUNG 37 5'UTR Ins - TCTC rs35199378 uc003qei.3 TCF21_uc003qej.... Hybrid_Cap...
TNIK p.L1197I 3 170786747 170786747 LOUNH91_LUNG 37 Missense_Mutation SNP G T uc003fhh.2 TNIK_uc003fhi.2... Hybrid_Cap... view
TOP2B p.L289R 3 25675477 25675477 LOUNH91_LUNG 37 Missense_Mutation SNP A C uc003cdj.2 TOP2B_uc011awn.... Hybrid_Cap... view
TP53 p.V143M 17 7578503 7578503 LOUNH91_LUNG 37 Missense_Mutation SNP C T uc002gim.2 TP53_uc002gig.1... Hybrid_Cap... view
TP53BP1 p.454_456PIP>P 15 43762078 43762083 LOUNH91_LUNG 37 In_Frame_Del Del GGGAT... - uc001zrr.3 TP53BP1_uc010ud... Hybrid_Cap...
TP63 3 189507518 189507519 LOUNH91_LUNG 37 Intron Ins - AGAG rs62702062;rs79714037 uc003fry.2 TP63_uc003frx.2... Hybrid_Cap...
TRIM33 1 114940215 114940216 LOUNH91_LUNG 37 3'UTR Ins - G rs68133208 uc001eew.2 TRIM33_uc010owr... Hybrid_Cap...
USP6 p.A792E 17 5050433 5050433 LOUNH91_LUNG 37 Missense_Mutation SNP C A uc002gau.1 USP6_uc002gav.1... Hybrid_Cap... view
VEGFC p.S419_splice 4 177605082 177605084 LOUNH91_LUNG 37 Splice_Site_Del Del TCA - uc003ius.1 Hybrid_Cap...
VRK3 19 50491608 50491608 LOUNH91_LUNG 37 Intron SNP T G uc002prg.2 VRK3_uc002prh.1... Hybrid_Cap... view
WNK3 p.P376H X 54328255 54328255 LOUNH91_LUNG 37 Missense_Mutation SNP G T uc004dtc.1 WNK3_uc004dtd.1... Hybrid_Cap... view