Annotation Summary for Cell Line: MOG-G-CCM  

Cell line primary name: MOG-G-CCM
Cell line aliases:
Gender:
Site Primary: central_nervous_system
Histology: glioma
Hist Subtype1: astrocytoma
Notes:
Source: ECACC
Expression arrays: PARES_p_NCLE_RNA_Redo_HG-U133_Plus_2_E05_257702
SNP arrays: HONEY_p_NCLE_DNAAffy3_S_GenomeWideSNP_6_D01_293352
Oncomap: yes
Hybrid Capture Sequencing: yes


Mutations in MOG-G-CCM

GeneProtein
Change
ChrStartEnd SampleNCBI
Build
Variant
Classification
Variant TypeReference
Allele
Tumor
Allele 1
dbSNP IDAnnotation
Transcript
Other
Transcripts
Method View
Reads
Mutation
Assessor
AAK1 p.541_542QQ>Q 2 69741754 69741756 MOGGCCM_CENTRAL... 37 In_Frame_Del Del TGT - rs55712143 uc002sfp.2 AAK1_uc010fdk.2... Hybrid_Cap...
ABL2 1 179086419 179086420 MOGGCCM_CENTRAL... 37 Intron Ins - A rs72207641 uc001gmj.3 ABL2_uc010pnf.1... Hybrid_Cap...
ACACA 17 35766564 35766564 MOGGCCM_CENTRAL... 37 5'UTR Del A - uc002hno.2 ACACA_uc002hnn.... Hybrid_Cap...
ADAM28 8 24211994 24211997 MOGGCCM_CENTRAL... 37 3'UTR Del CTAT - rs10610134 uc003xdy.2 ADAM28_uc011laa... Hybrid_Cap...
AKAP12 p.1531_1532insE 6 151674116 151674117 MOGGCCM_CENTRAL... 37 In_Frame_Ins Ins - GAG rs34737819 uc011eep.1 AKAP12_uc003qoe... Hybrid_Cap...
ALPK2 p.EDTST1006del 18 56204388 56204402 MOGGCCM_CENTRAL... 37 In_Frame_Del Del CAGTT... - rs60644017;rs117623369 uc002lhj.3 ALPK2_uc002lhk.... Hybrid_Cap...
BCR 22 23631813 23631814 MOGGCCM_CENTRAL... 37 Intron Ins - C rs66503844 uc002zww.2 BCR_uc002zwx.2_... Hybrid_Cap...
BCR 22 23632777 23632778 MOGGCCM_CENTRAL... 37 Intron Ins - T uc002zww.2 BCR_uc002zwx.2_... Hybrid_Cap...
C17ORF37 17 37885640 37885641 MOGGCCM_CENTRAL... 37 3'UTR Ins - G rs75811535 uc002hsq.2 Hybrid_Cap...
CDH2 p.N500S 18 25570160 25570160 MOGGCCM_CENTRAL... 37 Missense_Mutation SNP T C uc002kwg.2 CDH2_uc010xbn.1... Hybrid_Cap... view
CHD1 p.P1684del 5 98192165 98192167 MOGGCCM_CENTRAL... 37 In_Frame_Del Del AGG - rs79267787;rs61749618 uc003knf.2 CHD1_uc010jbn.2... Hybrid_Cap...
CHD8 14 21853630 21853630 MOGGCCM_CENTRAL... 37 3'UTR Del T - rs78520772 uc001was.1 CHD8_uc001war.1... Hybrid_Cap...
CLPTM1 p.E657K 19 45496114 45496114 MOGGCCM_CENTRAL... 37 Missense_Mutation SNP G A uc002pai.2 CLPTM1_uc010xxf... Hybrid_Cap... view
CLTCL1 p.V1201_splice 22 19189003 19189004 MOGGCCM_CENTRAL... 37 Splice_Site_Ins Ins - C rs11386977 uc002zpb.2 CLTCL1_uc011agv... Hybrid_Cap...
CLTCL1 22 19196673 19196674 MOGGCCM_CENTRAL... 37 Intron Ins - A uc002zpb.2 CLTCL1_uc011agv... Hybrid_Cap...
CNTN6 3 1339681 1339686 MOGGCCM_CENTRAL... 37 Intron Del GTTTT... - uc003boz.2 CNTN6_uc010hbo.... Hybrid_Cap...
CREB3L2 p.T100del 7 137612914 137612916 MOGGCCM_CENTRAL... 37 In_Frame_Del Del TGG - uc003vtw.2 CREB3L2_uc003vt... Hybrid_Cap...
CSMD3 p.I1569F 8 113529314 113529314 MOGGCCM_CENTRAL... 37 Missense_Mutation SNP T A uc003ynu.2 CSMD3_uc003yns.... Hybrid_Cap... view
CTBP2 p.K974fs 10 126678123 126678123 MOGGCCM_CENTRAL... 37 Frame_Shift_Del Del T - uc001lie.3 CTBP2_uc009yak.... Hybrid_Cap...
DYRK1A 21 38884966 38884967 MOGGCCM_CENTRAL... 37 3'UTR Ins - T rs72430212 uc002ywk.2 DYRK1A_uc002ywi... Hybrid_Cap...
DYRK3 p.R438fs 1 206821857 206821857 MOGGCCM_CENTRAL... 37 Frame_Shift_Del Del T - uc001hej.2 DYRK3_uc001hek.... Hybrid_Cap...
EPHA6 3 97367230 97367231 MOGGCCM_CENTRAL... 37 Intron Ins - A rs115253553 uc010how.1 EPHA6_uc003drs.... Hybrid_Cap...
ERCC2 19 45854768 45854768 MOGGCCM_CENTRAL... 37 3'UTR Del G - uc002pbj.2 KLC3_uc002pbf.1... Hybrid_Cap...
ESR1 p.K451K 6 152382237 152382237 MOGGCCM_CENTRAL... 37 Silent SNP A G uc010kio.2 ESR1_uc003qom.3... Hybrid_Cap... view
EXT1 8 118811807 118811807 MOGGCCM_CENTRAL... 37 3'UTR Del T - uc003yok.1 Hybrid_Cap...
FGFR1OP 6 167453519 167453520 MOGGCCM_CENTRAL... 37 3'UTR Ins - T rs115519488 uc003qvj.2 CCR6_uc003qvl.2... Hybrid_Cap...
FGFR3 4 1809128 1809129 MOGGCCM_CENTRAL... 37 3'UTR Del GT - uc003gdu.2 FGFR3_uc003gdr.... Hybrid_Cap...
FLI1 11 128638217 128638217 MOGGCCM_CENTRAL... 37 Intron Del G - uc010sbu.1 FLI1_uc010sbt.1... Hybrid_Cap...
FLT4 5 180035183 180035185 MOGGCCM_CENTRAL... 37 Intron Del AGT - uc003mlz.3 FLT4_uc003mma.3... Hybrid_Cap...
GPR112 p.D2657del X 135474445 135474447 MOGGCCM_CENTRAL... 37 In_Frame_Del Del GAT - rs3030295 uc004ezu.1 GPR112_uc010nsb... Hybrid_Cap...
GRIA3 X 122318386 122318387 MOGGCCM_CENTRAL... 37 Splice_Site_Ins Ins - G rs66632982 uc004etq.3 GRIA3_uc004etr.... Hybrid_Cap...
GUCY2C 12 14827464 14827466 MOGGCCM_CENTRAL... 37 Intron Del ATC - rs72525754;rs3083879 uc001rcd.2 GUCY2C_uc009zhz... Hybrid_Cap...
HNF1A 12 121434630 121434631 MOGGCCM_CENTRAL... 37 Intron Ins - TCATTCAT rs75100977 uc010szn.1 HNF1A_uc001tze.... Hybrid_Cap...
JAG1 p.R1060Q 20 10621451 10621451 MOGGCCM_CENTRAL... 37 Missense_Mutation SNP C T uc002wnw.2 Hybrid_Cap... view
KLK7 19 51480672 51480675 MOGGCCM_CENTRAL... 37 3'UTR Del GGTT - uc002puo.2 KLK7_uc002pup.2... Hybrid_Cap...
LRRK1 p.V1915I 15 101606385 101606385 MOGGCCM_CENTRAL... 37 Missense_Mutation SNP G A uc002bwr.2 LRRK1_uc010usb.... Hybrid_Cap... view
MAML3 p.Q767_splice 4 140651585 140651587 MOGGCCM_CENTRAL... 37 Splice_Site_Del Del CTG - uc003ihz.1 MGST2_uc010ioi.... Hybrid_Cap...
MAP2K1 15 66679649 66679650 MOGGCCM_CENTRAL... 37 5'UTR Ins - C rs67229745 uc010bhq.2 Hybrid_Cap...
MAP3K1 p.T949del 5 56177849 56177851 MOGGCCM_CENTRAL... 37 In_Frame_Del Del CAA - uc003jqw.3 Hybrid_Cap...
MAP3K14 p.R218_splice 17 43364293 43364294 MOGGCCM_CENTRAL... 37 Splice_Site_Ins Ins - G rs66766023 uc002iiw.1 MAP3K14_uc010da... Hybrid_Cap...
MAPKAPK3 3 50685575 50685575 MOGGCCM_CENTRAL... 37 3'UTR Del A - rs76026164 uc003day.1 MAPKAPK3_uc003d... Hybrid_Cap...
MAPKBP1 15 42111746 42111746 MOGGCCM_CENTRAL... 37 Intron Del G - uc001zok.3 MAPKBP1_uc001zo... Hybrid_Cap...
MLLT3 9 20346377 20346378 MOGGCCM_CENTRAL... 37 3'UTR Ins - A rs66943046 uc003zoe.2 MLLT3_uc011lne.... Hybrid_Cap...
MLLT6 17 36881873 36881873 MOGGCCM_CENTRAL... 37 3'UTR Del C - uc002hqi.3 MLLT6_uc002hqk.... Hybrid_Cap...
MMP8 p.R116_splice 11 102593159 102593159 MOGGCCM_CENTRAL... 37 Splice_Site_SNP SNP C T uc001phe.2 MMP8_uc010rut.1... Hybrid_Cap... view
MYLK 3 123332875 123332876 MOGGCCM_CENTRAL... 37 3'UTR Ins - TT rs35930843;rs115544676 uc003ego.2 MYLK_uc003egl.2... Hybrid_Cap...
NCAM1 11 112832307 112832308 MOGGCCM_CENTRAL... 37 5'UTR Ins - A rs117108942 uc009yyq.1 NCAM1_uc001pno.... Hybrid_Cap...
NCAM1 11 112832340 112832340 MOGGCCM_CENTRAL... 37 5'UTR Del C - uc009yyq.1 NCAM1_uc001pno.... Hybrid_Cap...
NEK3 13 52707174 52707174 MOGGCCM_CENTRAL... 37 3'UTR SNP T G uc001vgh.2 NEK3_uc001vgg.2... Hybrid_Cap... view
NEK3 p.K313_splice 13 52718050 52718051 MOGGCCM_CENTRAL... 37 Splice_Site_Ins Ins - T rs72514762 uc001vgh.2 NEK3_uc001vgg.2... Hybrid_Cap...
NPM1 5 170837734 170837734 MOGGCCM_CENTRAL... 37 3'UTR Del T - uc011dex.1 NPM1_uc003mbi.2... Hybrid_Cap...
NR1H2 p.176_177insQ 19 50881820 50881821 MOGGCCM_CENTRAL... 37 In_Frame_Ins Ins - AAC rs66783852;rs112359270 uc010enw.2 NR1H2_uc002prv.... Hybrid_Cap...
PDE4DIP p.L601fs 1 144915624 144915624 MOGGCCM_CENTRAL... 37 Frame_Shift_Del Del G - rs1778112 uc001elw.3 NBPF10_uc009wir... Hybrid_Cap...
PDE4DIP p.E243fs 1 144923729 144923729 MOGGCCM_CENTRAL... 37 Frame_Shift_Del Del T - uc001elw.3 NBPF10_uc009wir... Hybrid_Cap...
PGR 11 100933598 100933599 MOGGCCM_CENTRAL... 37 Intron Ins - AATGA rs35148438 uc001pgh.2 PGR_uc001pgg.2_... Hybrid_Cap...
PRKDC p.L1244fs 8 48805816 48805817 MOGGCCM_CENTRAL... 37 Frame_Shift_Ins Ins - G rs67588121 uc003xqi.2 PRKDC_uc003xqj.... Hybrid_Cap...
RB1 p.W563* 13 48955572 48955572 MOGGCCM_CENTRAL... 37 Nonsense_Mutation SNP G A uc001vcb.2 Hybrid_Cap... view
RBPJ p.R238* 4 26426291 26426291 MOGGCCM_CENTRAL... 37 Nonsense_Mutation SNP C T rs5007634 uc003grx.1 RBPJ_uc003gry.1... Hybrid_Cap... view
RECQL4 p.R766fs 8 145738768 145738768 MOGGCCM_CENTRAL... 37 Frame_Shift_Del Del G - uc003zdj.2 Hybrid_Cap...
RIPK2 p.M470V 8 90802429 90802429 MOGGCCM_CENTRAL... 37 Missense_Mutation SNP A G uc003yee.2 RIPK2_uc003yef.... Hybrid_Cap... view
ROR2 p.P815L 9 94486332 94486332 MOGGCCM_CENTRAL... 37 Missense_Mutation SNP G A uc004arj.1 ROR2_uc004ari.1... Hybrid_Cap... view
RPS6KA5 14 91360733 91360734 MOGGCCM_CENTRAL... 37 Intron Ins - T rs77438853 uc001xys.2 RPS6KA5_uc010tw... Hybrid_Cap...
SERPINA12 p.E114K 14 94964395 94964395 MOGGCCM_CENTRAL... 37 Missense_Mutation SNP C T uc001ydj.2 Hybrid_Cap... view
SLC6A8 X 152957656 152957657 MOGGCCM_CENTRAL... 37 Intron Ins - A uc004fib.3 SLC6A8_uc004fic... Hybrid_Cap...
SORL1 11 121500400 121500401 MOGGCCM_CENTRAL... 37 3'UTR Ins - A rs73020651 uc001pxx.2 SORL1_uc010rzp.... Hybrid_Cap...
STK25 2 242435659 242435662 MOGGCCM_CENTRAL... 37 Intron Del AAGG - rs3215138;rs75497042 uc002wbm.2 STK25_uc002wbk.... Hybrid_Cap...
STK31 7 23872024 23872025 MOGGCCM_CENTRAL... 37 3'UTR Ins - TTTG rs66787534 uc003sws.3 STK31_uc003swt.... Hybrid_Cap...
TCF21 6 134210497 134210498 MOGGCCM_CENTRAL... 37 5'UTR Ins - TCTC rs35199378 uc003qei.3 TCF21_uc003qej.... Hybrid_Cap...
TGFB2 1 218519928 218519929 MOGGCCM_CENTRAL... 37 5'UTR Ins - AAAC uc001hln.2 TGFB2_uc001hll.... Hybrid_Cap...
TIAM1 p.W538C 21 32598237 32598237 MOGGCCM_CENTRAL... 37 Missense_Mutation SNP C A uc002yow.1 TIAM1_uc011adk.... Hybrid_Cap... view
TNRC6B p.Q1328del 22 40697177 40697179 MOGGCCM_CENTRAL... 37 In_Frame_Del Del GCA - rs114291931 uc011aor.1 TNRC6B_uc003aym... Hybrid_Cap...
TP53 p.A159V 17 7578454 7578454 MOGGCCM_CENTRAL... 37 Missense_Mutation SNP G A uc002gim.2 TP53_uc002gig.1... Hybrid_Cap... view
TP63 3 189507518 189507519 MOGGCCM_CENTRAL... 37 Intron Ins - AG rs62702062;rs79714037 uc003fry.2 TP63_uc003frx.2... Hybrid_Cap...
VEGFC p.S419_splice 4 177605082 177605084 MOGGCCM_CENTRAL... 37 Splice_Site_Del Del TCA - uc003ius.1 Hybrid_Cap...