Annotation Summary for Cell Line: OCI-LY-19  

Cell line primary name: OCI-LY-19
Cell line aliases:
Gender: F
Site Primary: haematopoietic_and_lymphoid_tissue
Histology: lymphoid_neoplasm
Hist Subtype1: diffuse_large_B_cell_lymphoma
Notes:
Source: DSMZ
Expression arrays: SILOS_p_NCLE_RNA9_HG-U133_Plus_2_E06_523460
SNP arrays: AWASH_p_NCLE_DNAAffy10_GenomeWideSNP_6_E05_542914
Oncomap: yes
Hybrid Capture Sequencing: yes


Mutations in OCI-LY-19

GeneProtein
Change
ChrStartEnd SampleNCBI
Build
Variant
Classification
Variant TypeReference
Allele
Tumor
Allele 1
dbSNP IDAnnotation
Transcript
Other
Transcripts
Method View
Reads
Mutation
Assessor
ADAM17 2 9630245 9630245 OCILY19_HAEMATO... 37 3'UTR Del T - uc002qzu.2 IAH1_uc010yiz.1... Hybrid_Cap...
ADAM28 8 24211994 24211997 OCILY19_HAEMATO... 37 3'UTR Del CTAT - rs10610134 uc003xdy.2 ADAM28_uc011laa... Hybrid_Cap...
AKAP12 p.1531_1532insE 6 151674116 151674117 OCILY19_HAEMATO... 37 In_Frame_Ins Ins - GAG rs34737819 uc011eep.1 AKAP12_uc003qoe... Hybrid_Cap...
AKAP9 p.1335_1336insQ 7 91652178 91652179 OCILY19_HAEMATO... 37 In_Frame_Ins Ins - AAC rs34756483 uc003ulg.2 AKAP9_uc003ule.... Hybrid_Cap...
ALPK1 4 113347609 113347610 OCILY19_HAEMATO... 37 Intron Ins - T rs68137453 uc003iap.3 ALPK1_uc003ian.... Hybrid_Cap...
ALPK1 p.V1032I 4 113356363 113356363 OCILY19_HAEMATO... 37 Missense_Mutation SNP G A uc003iap.3 ALPK1_uc003ian.... Hybrid_Cap... view
ALPK2 p.1388_1389FF>F 18 56203253 56203255 OCILY19_HAEMATO... 37 In_Frame_Del Del AAG - uc002lhj.3 ALPK2_uc002lhk.... Hybrid_Cap...
ARID1A p.L818fs 1 27089496 27089496 OCILY19_HAEMATO... 37 Frame_Shift_Del Del T - uc001bmv.1 ARID1A_uc001bmt... Hybrid_Cap...
ATP11A p.R585Q 13 113496638 113496638 OCILY19_HAEMATO... 37 Missense_Mutation SNP G A uc001vsj.3 ATP11A_uc001vsi... Hybrid_Cap... view
BAX 19 49464507 49464508 OCILY19_HAEMATO... 37 3'UTR Ins - T uc002plf.1 BAX_uc002plg.1_... Hybrid_Cap...
BCL2 18 60985302 60985302 OCILY19_HAEMATO... 37 Intron SNP C T uc002lit.1 BCL2_uc002liu.1... Hybrid_Cap... view
BCR 22 23631813 23631814 OCILY19_HAEMATO... 37 Intron Ins - C rs66503844 uc002zww.2 BCR_uc002zwx.2_... Hybrid_Cap...
BIRC5 17 76219784 76219785 OCILY19_HAEMATO... 37 3'UTR Ins - AA uc002jvf.2 BIRC5_uc002jvg.... Hybrid_Cap...
CASC5 p.L1917V 15 40921558 40921558 OCILY19_HAEMATO... 37 Missense_Mutation SNP C G uc010bbs.1 CASC5_uc010bbt.... Hybrid_Cap... view
CASP8 2 202122901 202122902 OCILY19_HAEMATO... 37 5'UTR Ins - T uc002uxt.1 CASP8_uc010ftc.... Hybrid_Cap...
CHD1 p.P1684del 5 98192165 98192167 OCILY19_HAEMATO... 37 In_Frame_Del Del AGG - rs79267787;rs61749618 uc003knf.2 CHD1_uc010jbn.2... Hybrid_Cap...
CLTCL1 p.V1201_splice 22 19189003 19189004 OCILY19_HAEMATO... 37 Splice_Site_Ins Ins - C rs11386977 uc002zpb.2 CLTCL1_uc011agv... Hybrid_Cap...
CREB3L2 p.T100del 7 137612914 137612916 OCILY19_HAEMATO... 37 In_Frame_Del Del TGG - uc003vtw.2 CREB3L2_uc003vt... Hybrid_Cap...
CREBBP p.D1435E 16 3788649 3788649 OCILY19_HAEMATO... 37 Missense_Mutation SNP A T uc002cvv.2 CREBBP_uc002cvw... Hybrid_Cap... view
DTX1 12 113495951 113495951 OCILY19_HAEMATO... 37 5'UTR SNP C T uc001tuk.1 Hybrid_Cap... view
EPHA6 3 97367230 97367231 OCILY19_HAEMATO... 37 Intron Ins - A rs115253553 uc010how.1 EPHA6_uc003drs.... Hybrid_Cap...
ERCC2 19 45854768 45854768 OCILY19_HAEMATO... 37 3'UTR Del G - uc002pbj.2 KLC3_uc002pbf.1... Hybrid_Cap...
ETV1 7 14028708 14028708 OCILY19_HAEMATO... 37 5'UTR Del A - rs77190713 uc011jxq.1 ETV1_uc011jxn.1... Hybrid_Cap...
FGFR1OP 6 167453519 167453520 OCILY19_HAEMATO... 37 3'UTR Ins - T rs115519488 uc003qvj.2 CCR6_uc003qvl.2... Hybrid_Cap...
FGFR3 4 1809128 1809129 OCILY19_HAEMATO... 37 3'UTR Del GT - uc003gdu.2 FGFR3_uc003gdr.... Hybrid_Cap...
FLI1 11 128638217 128638217 OCILY19_HAEMATO... 37 Intron Del G - uc010sbu.1 FLI1_uc010sbt.1... Hybrid_Cap...
FN1 2 216244182 216244185 OCILY19_HAEMATO... 37 Intron Del GTAC - uc002vfa.2 FN1_uc002vfb.2_... Hybrid_Cap...
GPR112 p.D2657del X 135474445 135474447 OCILY19_HAEMATO... 37 In_Frame_Del Del GAT - rs3030295 uc004ezu.1 GPR112_uc010nsb... Hybrid_Cap...
GRIA3 X 122318386 122318387 OCILY19_HAEMATO... 37 Splice_Site_Ins Ins - G rs66632982 uc004etq.3 GRIA3_uc004etr.... Hybrid_Cap...
GRK1 p.L83Q 13 114321949 114321949 OCILY19_HAEMATO... 37 Missense_Mutation SNP T A uc010tkf.1 Hybrid_Cap... view
GUCY2C 12 14827464 14827466 OCILY19_HAEMATO... 37 Intron Del ATC - rs72525754;rs3083879 uc001rcd.2 GUCY2C_uc009zhz... Hybrid_Cap...
HNF1A 12 121434630 121434631 OCILY19_HAEMATO... 37 Intron Ins - TCATTCAT rs75100977 uc010szn.1 HNF1A_uc001tze.... Hybrid_Cap...
ICK p.L48F 6 52902751 52902751 OCILY19_HAEMATO... 37 Missense_Mutation SNP G A uc003pbh.2 ICK_uc003pbi.2_... Hybrid_Cap... view
ILK 11 6630029 6630029 OCILY19_HAEMATO... 37 Intron Del C - uc001mee.2 ILK_uc001mef.2_... Hybrid_Cap...
ITGA10 p.P543S 1 145534122 145534122 OCILY19_HAEMATO... 37 Missense_Mutation SNP C T uc001eoa.2 NBPF10_uc001emp... Hybrid_Cap... view
ITGA5 p.V536I 12 54797710 54797710 OCILY19_HAEMATO... 37 Missense_Mutation SNP C T uc001sga.2 Hybrid_Cap... view
ITPR2 p.R470_splice 12 26834804 26834805 OCILY19_HAEMATO... 37 Splice_Site_Ins Ins - ACTC rs66696203;rs59199365 uc001rhg.2 Hybrid_Cap...
KTN1 p.A456S 14 56101281 56101281 OCILY19_HAEMATO... 37 Missense_Mutation SNP G T uc001xcb.2 KTN1_uc001xce.2... Hybrid_Cap... view
LETM2 8 38265796 38265798 OCILY19_HAEMATO... 37 3'UTR Del ACT - uc003xlm.1 LETM2_uc003xll.... Hybrid_Cap...
LMTK3 p.A410V 19 49004262 49004262 OCILY19_HAEMATO... 37 Missense_Mutation SNP G A uc002pjk.2 Hybrid_Cap... view
LRRK2 p.S1228T 12 40697842 40697842 OCILY19_HAEMATO... 37 Missense_Mutation SNP G C rs80179604 uc001rmg.3 LRRK2_uc001rmh.... Hybrid_Cap... view
MAML2 p.604_607QQQQ>Q 11 95825375 95825383 OCILY19_HAEMATO... 37 In_Frame_Del Del TGCTG... - rs113349418 uc001pfw.1 Hybrid_Cap...
MAML3 p.Q767_splice 4 140651585 140651587 OCILY19_HAEMATO... 37 Splice_Site_Del Del CTG - uc003ihz.1 MGST2_uc010ioi.... Hybrid_Cap...
MAP3K1 p.T949del 5 56177849 56177851 OCILY19_HAEMATO... 37 In_Frame_Del Del CAA - uc003jqw.3 Hybrid_Cap...
MAP3K14 p.R218_splice 17 43364293 43364294 OCILY19_HAEMATO... 37 Splice_Site_Ins Ins - G rs66766023 uc002iiw.1 MAP3K14_uc010da... Hybrid_Cap...
MAPKAPK3 3 50685575 50685575 OCILY19_HAEMATO... 37 3'UTR Del A - rs76026164 uc003day.1 MAPKAPK3_uc003d... Hybrid_Cap...
MEF2A p.Q430del 15 100252710 100252712 OCILY19_HAEMATO... 37 In_Frame_Del Del CAG - uc010urw.1 MEF2A_uc010urv.... Hybrid_Cap...
MLLT6 17 36881873 36881873 OCILY19_HAEMATO... 37 3'UTR Del C - uc002hqi.3 MLLT6_uc002hqk.... Hybrid_Cap...
MMP20 p.W149* 11 102482563 102482563 OCILY19_HAEMATO... 37 Nonsense_Mutation SNP C T uc001phc.2 Hybrid_Cap... view
MN1 p.544_546QQQ>Q 22 28194895 28194900 OCILY19_HAEMATO... 37 In_Frame_Del Del TGCTG... - rs75719175 uc003adj.2 Hybrid_Cap...
NCAM1 11 112832307 112832308 OCILY19_HAEMATO... 37 5'UTR Ins - A rs117108942 uc009yyq.1 NCAM1_uc001pno.... Hybrid_Cap...
NCAM1 11 112832340 112832340 OCILY19_HAEMATO... 37 5'UTR Del C - uc009yyq.1 NCAM1_uc001pno.... Hybrid_Cap...
NCOA3 20 46282339 46282340 OCILY19_HAEMATO... 37 3'UTR Ins - AT uc002xtk.2 NCOA3_uc002xtl.... Hybrid_Cap...
NPR1 1 153665919 153665920 OCILY19_HAEMATO... 37 3'UTR Ins - C rs66682713 uc001fcs.3 NPR1_uc010pdz.1... Hybrid_Cap...
NR1H2 p.176_177insQ 19 50881820 50881821 OCILY19_HAEMATO... 37 In_Frame_Ins Ins - AAC rs66783852;rs112359270 uc010enw.2 NR1H2_uc002prv.... Hybrid_Cap...
NR3C1 5 142780419 142780419 OCILY19_HAEMATO... 37 Splice_Site_SNP SNP T A uc003lmy.2 NR3C1_uc003lmz.... Hybrid_Cap... view
NRAS p.Q61K 1 115256530 115256530 OCILY19_HAEMATO... 37 Missense_Mutation SNP G T uc009wgu.2 Hybrid_Cap... view
NUP214 9 134067556 134067557 OCILY19_HAEMATO... 37 Intron Ins - T rs66652901 uc004cag.2 NUP214_uc004cah... Hybrid_Cap...
ODZ1 p.A437S X 123787493 123787493 OCILY19_HAEMATO... 37 Missense_Mutation SNP C A uc010nqy.2 ODZ1_uc011muj.1... Hybrid_Cap... view
PAX3 2 223158653 223158653 OCILY19_HAEMATO... 37 Intron Del T - rs112753212 uc002vmt.1 PAX3_uc002vmy.1... Hybrid_Cap...
PIGU p.P343fs 20 33169374 33169374 OCILY19_HAEMATO... 37 Frame_Shift_Del Del G - uc002xas.2 PIGU_uc010zul.1... Hybrid_Cap...
PIK3R4 p.R672C 3 130437346 130437346 OCILY19_HAEMATO... 37 Missense_Mutation SNP G A uc003enj.2 Hybrid_Cap... view
PRKDC p.L1244fs 8 48805816 48805817 OCILY19_HAEMATO... 37 Frame_Shift_Ins Ins - G rs67588121 uc003xqi.2 PRKDC_uc003xqj.... Hybrid_Cap...
RALGDS 9 135975816 135975816 OCILY19_HAEMATO... 37 Intron SNP G A uc011mcw.1 RALGDS_uc004cct... Hybrid_Cap... view
RECQL4 p.R766fs 8 145738768 145738768 OCILY19_HAEMATO... 37 Frame_Shift_Del Del G - uc003zdj.2 Hybrid_Cap...
RGL3 p.A131V 19 11527321 11527321 OCILY19_HAEMATO... 37 Missense_Mutation SNP G A uc002mro.2 RGL3_uc002mrn.2... Hybrid_Cap... view
RICTOR p.N1166K 5 38950452 38950452 OCILY19_HAEMATO... 37 Missense_Mutation SNP A C uc003jlo.2 RICTOR_uc003jlp... Hybrid_Cap... view
RPS6KL1 14 75373626 75373627 OCILY19_HAEMATO... 37 3'UTR Ins - TGAT uc001xqx.1 RPS6KL1_uc001xq... Hybrid_Cap...
SMG1 p.A1817T 16 18861283 18861283 OCILY19_HAEMATO... 37 Missense_Mutation SNP C T uc002dfm.2 SMG1_uc010bwb.2... Hybrid_Cap... view
STK31 7 23872024 23872025 OCILY19_HAEMATO... 37 3'UTR Ins - TTTG rs66787534 uc003sws.3 STK31_uc003swt.... Hybrid_Cap...
TAOK3 12 118588761 118588762 OCILY19_HAEMATO... 37 3'UTR Ins - T rs116872184 uc001twx.2 TAOK3_uc001twv.... Hybrid_Cap...
TCERG1L p.L487Q 10 132902553 132902553 OCILY19_HAEMATO... 37 Missense_Mutation SNP A T uc001lkp.2 TCERG1L_uc009ya... Hybrid_Cap... view
TLR3 4 187003454 187003454 OCILY19_HAEMATO... 37 Intron Del T - uc003iyq.2 TLR3_uc011ckz.1... Hybrid_Cap...
TNRC6B p.Q1328del 22 40697177 40697179 OCILY19_HAEMATO... 37 In_Frame_Del Del GCA - rs114291931 uc011aor.1 TNRC6B_uc003aym... Hybrid_Cap...
TRIM33 1 114940215 114940216 OCILY19_HAEMATO... 37 3'UTR Ins - G rs68133208 uc001eew.2 TRIM33_uc010owr... Hybrid_Cap...
TRPM6 p.M973_splice 9 77400789 77400789 OCILY19_HAEMATO... 37 Splice_Site_SNP SNP C A uc004ajl.1 TRPM6_uc004ajk.... Hybrid_Cap... view
TRPS1 8 116635872 116635873 OCILY19_HAEMATO... 37 5'UTR Ins - A rs76893349 uc003yny.2 TRPS1_uc011lhy.... Hybrid_Cap...
TTN p.V31138F 2 179400226 179400226 OCILY19_HAEMATO... 37 Missense_Mutation SNP C A uc010zfg.1 TTN_uc010zfh.1_... Hybrid_Cap... view
TTN p.D27951Y 2 179415703 179415703 OCILY19_HAEMATO... 37 Missense_Mutation SNP C A uc010zfg.1 TTN_uc010zfh.1_... Hybrid_Cap... view
TTN p.T23978A 2 179431223 179431223 OCILY19_HAEMATO... 37 Missense_Mutation SNP T C uc010zfg.1 TTN_uc010zfh.1_... Hybrid_Cap... view
VEGFC p.S419_splice 4 177605082 177605084 OCILY19_HAEMATO... 37 Splice_Site_Del Del TCA - uc003ius.1 Hybrid_Cap...