Annotation Summary for Cell Line: OE19  

Cell line primary name: OE19
Cell line aliases:
Gender: M
Site Primary: oesophagus
Histology: carcinoma
Hist Subtype1: adenocarcinoma
Notes:
Source: ECACC
Expression arrays: PARES_p_NCLE_RNA_Redo_HG-U133_Plus_2_C06_257656
SNP arrays: ARLES_p_NCLE_DNAAffy2_S_GenomeWideSNP_6_D09_256090
Oncomap: yes
Hybrid Capture Sequencing: yes


Mutations in OE19

GeneProtein
Change
ChrStartEnd SampleNCBI
Build
Variant
Classification
Variant TypeReference
Allele
Tumor
Allele 1
dbSNP IDAnnotation
Transcript
Other
Transcripts
Method View
Reads
Mutation
Assessor
AATK p.P382S 17 79096592 79096592 OE19_OESOPHAGUS 37 Missense_Mutation SNP G A uc010dia.2 AATK_uc010dhz.2... Hybrid_Cap... view
ADAM17 2 9630245 9630245 OE19_OESOPHAGUS 37 3'UTR Del T - uc002qzu.2 IAH1_uc010yiz.1... Hybrid_Cap...
ADAM28 8 24211994 24211997 OE19_OESOPHAGUS 37 3'UTR Del CTAT - rs10610134 uc003xdy.2 ADAM28_uc011laa... Hybrid_Cap...
AKAP12 p.G269del 6 151670330 151670332 OE19_OESOPHAGUS 37 In_Frame_Del Del AGG - rs111963593;rs111653642 uc011eep.1 AKAP12_uc003qoe... Hybrid_Cap...
AKAP12 p.1531_1532insE 6 151674116 151674117 OE19_OESOPHAGUS 37 In_Frame_Ins Ins - GAG rs34737819 uc011eep.1 AKAP12_uc003qoe... Hybrid_Cap...
AKAP9 p.1335_1336insQ 7 91652178 91652179 OE19_OESOPHAGUS 37 In_Frame_Ins Ins - AAC rs34756483 uc003ulg.2 AKAP9_uc003ule.... Hybrid_Cap...
BAI1 p.V957M 8 143599550 143599550 OE19_OESOPHAGUS 37 Missense_Mutation SNP G A uc003ywm.2 Hybrid_Cap... view
BCR 22 23631813 23631814 OE19_OESOPHAGUS 37 Intron Ins - C rs66503844 uc002zww.2 BCR_uc002zwx.2_... Hybrid_Cap...
BRD2 6 32948599 32948599 OE19_OESOPHAGUS 37 3'UTR Del C - uc010juh.2 BRD2_uc003ocn.3... Hybrid_Cap...
C15ORF2 p.P119S 15 24921369 24921369 OE19_OESOPHAGUS 37 Missense_Mutation SNP C T uc001ywo.2 Hybrid_Cap... view
C15ORF55 p.K827N 15 34648690 34648690 OE19_OESOPHAGUS 37 Missense_Mutation SNP G C uc010ucc.1 C15orf55_uc010u... Hybrid_Cap... view
CABC1 1 227171585 227171585 OE19_OESOPHAGUS 37 Intron Del T - uc001hqm.1 CABC1_uc001hqn.... Hybrid_Cap...
CAMK2A 5 149602223 149602224 OE19_OESOPHAGUS 37 3'UTR Del AC - uc003lrt.2 CAMK2A_uc003lrs... Hybrid_Cap...
CDC42BPB p.S1060F 14 103416933 103416933 OE19_OESOPHAGUS 37 Missense_Mutation SNP G A uc001ymi.1 CDC42BPB_uc001y... Hybrid_Cap... view
CDC42BPB p.D939E 14 103429402 103429402 OE19_OESOPHAGUS 37 Missense_Mutation SNP A C uc001ymi.1 CDC42BPB_uc001y... Hybrid_Cap... view
CDH1 p.R90W 16 68835677 68835677 OE19_OESOPHAGUS 37 Missense_Mutation SNP C T uc002ewg.1 CDH1_uc010vlj.1... Hybrid_Cap... view
CDK1 p.S178L 10 62551691 62551691 OE19_OESOPHAGUS 37 Missense_Mutation SNP C T uc001jld.2 CDK1_uc001jle.2... Hybrid_Cap... view
CHD1 p.P1684del 5 98192165 98192167 OE19_OESOPHAGUS 37 In_Frame_Del Del AGG - rs79267787;rs61749618 uc003knf.2 CHD1_uc010jbn.2... Hybrid_Cap...
CLTCL1 p.V1201_splice 22 19189003 19189004 OE19_OESOPHAGUS 37 Splice_Site_Ins Ins - C rs11386977 uc002zpb.2 CLTCL1_uc011agv... Hybrid_Cap...
COL18A1 p.G1175D 21 46913416 46913416 OE19_OESOPHAGUS 37 Missense_Mutation SNP G A uc011afs.1 COL18A1_uc002zh... Hybrid_Cap... view
CSMD3 p.R1872T 8 113418947 113418947 OE19_OESOPHAGUS 37 Missense_Mutation SNP C G uc003ynu.2 CSMD3_uc003yns.... Hybrid_Cap... view
CSNK1G3 p.N112S 5 122909132 122909132 OE19_OESOPHAGUS 37 Missense_Mutation SNP A G uc003ktl.2 CSNK1G3_uc003kt... Hybrid_Cap... view
CXCL12 10 44873992 44873993 OE19_OESOPHAGUS 37 Intron Ins - CT rs117617571 uc001jbh.2 CXCL12_uc001jbf... Hybrid_Cap...
CYP1B1 p.V320L 2 38301574 38301574 OE19_OESOPHAGUS 37 Missense_Mutation SNP C A rs72549382 uc002rqo.2 Hybrid_Cap... view
CYP1B1 p.G61E 2 38302350 38302350 OE19_OESOPHAGUS 37 Missense_Mutation SNP C T rs28936700 uc002rqo.2 Hybrid_Cap... view
DNAH8 6 38952247 38952250 OE19_OESOPHAGUS 37 Intron Del CACA - uc003ooe.1 DNAH8_uc003oog.... Hybrid_Cap...
EGF p.L789F 4 110902127 110902127 OE19_OESOPHAGUS 37 Missense_Mutation SNP G T uc003hzy.3 EGF_uc011cfu.1_... Hybrid_Cap... view
EGF p.A790G 4 110902129 110902129 OE19_OESOPHAGUS 37 Missense_Mutation SNP C G uc003hzy.3 EGF_uc011cfu.1_... Hybrid_Cap... view
EIF2AK3 p.S732N 2 88874806 88874806 OE19_OESOPHAGUS 37 Missense_Mutation SNP C T uc002stc.3 Hybrid_Cap... view
EP300 22 41574970 41574972 OE19_OESOPHAGUS 37 3'UTR Del GTA - rs76489032 uc003azl.3 Hybrid_Cap...
EPHA8 1 22928305 22928305 OE19_OESOPHAGUS 37 3'UTR SNP G T uc001bfx.1 Hybrid_Cap... view
FADD 11 70052596 70052596 OE19_OESOPHAGUS 37 3'UTR SNP G T uc001opm.2 Hybrid_Cap... view
FGFR1OP 6 167453519 167453520 OE19_OESOPHAGUS 37 3'UTR Ins - T rs115519488 uc003qvj.2 CCR6_uc003qvl.2... Hybrid_Cap...
FIP1L1 4 54245383 54245383 OE19_OESOPHAGUS 37 Intron SNP A T uc003gzy.2 PDGFRA_uc003haa... Hybrid_Cap... view
FLI1 11 128638217 128638217 OE19_OESOPHAGUS 37 Intron Del G - uc010sbu.1 FLI1_uc010sbt.1... Hybrid_Cap...
GOPC p.Y462del 6 117884418 117884420 OE19_OESOPHAGUS 37 In_Frame_Del Del TAA - rs79419780 uc003pxu.2 GOPC_uc003pxq.1... Hybrid_Cap...
GOPC p.K416N 6 117888027 117888027 OE19_OESOPHAGUS 37 Missense_Mutation SNP T G uc003pxu.2 GOPC_uc003pxq.1... Hybrid_Cap... view
GRIA3 X 122318386 122318387 OE19_OESOPHAGUS 37 Splice_Site_Ins Ins - G rs66632982 uc004etq.3 GRIA3_uc004etr.... Hybrid_Cap...
GUCY2C 12 14827464 14827466 OE19_OESOPHAGUS 37 Intron Del ATC - rs72525754;rs3083879 uc001rcd.2 GUCY2C_uc009zhz... Hybrid_Cap...
HNF1A 12 121434630 121434631 OE19_OESOPHAGUS 37 Intron Ins - TCATTCAT rs75100977 uc010szn.1 HNF1A_uc001tze.... Hybrid_Cap...
IGF1R 15 99192755 99192763 OE19_OESOPHAGUS 37 5'UTR Del TTTTT... - uc002bul.2 IGF1R_uc010urq.... Hybrid_Cap...
ILK 11 6630029 6630029 OE19_OESOPHAGUS 37 Intron Del C - uc001mee.2 ILK_uc001mef.2_... Hybrid_Cap...
INSRR 1 156820972 156820972 OE19_OESOPHAGUS 37 Intron SNP G T uc010pht.1 NTRK1_uc001fqf.... Hybrid_Cap... view
ITGB4 p.R791C 17 73736077 73736077 OE19_OESOPHAGUS 37 Missense_Mutation SNP C T uc002jpg.2 ITGB4_uc002jph.... Hybrid_Cap... view
ITPR2 p.R470_splice 12 26834804 26834805 OE19_OESOPHAGUS 37 Splice_Site_Ins Ins - ACTC rs66696203;rs59199365 uc001rhg.2 Hybrid_Cap...
KIAA2022 p.L1079I X 73961157 73961157 OE19_OESOPHAGUS 37 Missense_Mutation SNP G T uc004eby.2 Hybrid_Cap... view
KLK7 19 51480672 51480675 OE19_OESOPHAGUS 37 3'UTR Del GGTT - uc002puo.2 KLK7_uc002pup.2... Hybrid_Cap...
KPNA5 p.N245K 6 117037460 117037460 OE19_OESOPHAGUS 37 Missense_Mutation SNP C G uc003pxh.2 Hybrid_Cap... view
LAMA1 18 6965460 6965460 OE19_OESOPHAGUS 37 Intron SNP G A uc002knm.2 LAMA1_uc002knl.... Hybrid_Cap... view
LRP2 p.D4237N 2 170003351 170003351 OE19_OESOPHAGUS 37 Missense_Mutation SNP C T uc002ues.2 Hybrid_Cap... view
MAML3 p.Q767_splice 4 140651585 140651587 OE19_OESOPHAGUS 37 Splice_Site_Del Del CTG - uc003ihz.1 MGST2_uc010ioi.... Hybrid_Cap...
MAP3K1 p.T949del 5 56177849 56177851 OE19_OESOPHAGUS 37 In_Frame_Del Del CAA - uc003jqw.3 Hybrid_Cap...
MAP3K14 p.R218_splice 17 43364293 43364294 OE19_OESOPHAGUS 37 Splice_Site_Ins Ins - G rs66766023 uc002iiw.1 MAP3K14_uc010da... Hybrid_Cap...
MAP3K4 p.V618I 6 161491784 161491784 OE19_OESOPHAGUS 37 Missense_Mutation SNP G A uc003qtn.2 MAP3K4_uc010kkc... Hybrid_Cap... view
MAPK12 p.E312K 22 50693716 50693716 OE19_OESOPHAGUS 37 Missense_Mutation SNP C T uc003bkm.1 MAPK12_uc003bkn... Hybrid_Cap... view
MLL3 p.Y816fs 7 151945071 151945072 OE19_OESOPHAGUS 37 Frame_Shift_Ins Ins - T uc003wla.2 Hybrid_Cap...
MLLT10 p.G152G 10 21901327 21901327 OE19_OESOPHAGUS 37 Silent SNP T G uc001iqs.2 MLLT10_uc001iqt... Hybrid_Cap... view
MLLT4 6 168370675 168370675 OE19_OESOPHAGUS 37 3'UTR SNP G T uc003qwd.2 Hybrid_Cap... view
MLLT6 17 36881873 36881873 OE19_OESOPHAGUS 37 3'UTR Del C - uc002hqi.3 MLLT6_uc002hqk.... Hybrid_Cap...
MSH6 p.V592I 2 48026896 48026896 OE19_OESOPHAGUS 37 Missense_Mutation SNP G A uc002rwd.3 MSH6_uc002rwc.2... Hybrid_Cap... view
NCAM1 11 112832307 112832308 OE19_OESOPHAGUS 37 5'UTR Ins - A rs117108942 uc009yyq.1 NCAM1_uc001pno.... Hybrid_Cap...
NCAM1 11 112832340 112832340 OE19_OESOPHAGUS 37 5'UTR Del C - uc009yyq.1 NCAM1_uc001pno.... Hybrid_Cap...
NCOA3 p.Q1276del 20 46279837 46279839 OE19_OESOPHAGUS 37 In_Frame_Del Del CAG - rs2664555 uc002xtk.2 NCOA3_uc010ght.... Hybrid_Cap...
NCOA3 20 46282339 46282340 OE19_OESOPHAGUS 37 3'UTR Ins - AT uc002xtk.2 NCOA3_uc002xtl.... Hybrid_Cap...
NEK3 p.K313_splice 13 52718050 52718051 OE19_OESOPHAGUS 37 Splice_Site_Ins Ins - T rs72514762 uc001vgh.2 NEK3_uc001vgg.2... Hybrid_Cap...
NLRP3 1 247611982 247611982 OE19_OESOPHAGUS 37 3'UTR Del C - uc001icr.2 NLRP3_uc001ics.... Hybrid_Cap...
NPR1 1 153665919 153665920 OE19_OESOPHAGUS 37 3'UTR Ins - C rs66682713 uc001fcs.3 NPR1_uc010pdz.1... Hybrid_Cap...
NR1H2 p.176_177insQ 19 50881820 50881821 OE19_OESOPHAGUS 37 In_Frame_Ins Ins - AAC rs66783852;rs112359270 uc010enw.2 NR1H2_uc002prv.... Hybrid_Cap...
PASK p.R575Q 2 242066606 242066606 OE19_OESOPHAGUS 37 Missense_Mutation SNP C T uc010fzl.1 PASK_uc010zol.1... Hybrid_Cap... view
PAX3 2 223158653 223158653 OE19_OESOPHAGUS 37 Intron Del T - rs112753212 uc002vmt.1 PAX3_uc002vmy.1... Hybrid_Cap...
PNMT p.R196W 17 37826379 37826379 OE19_OESOPHAGUS 37 Missense_Mutation SNP C T uc002hsi.1 Hybrid_Cap... view
PRCC p.A40T 1 156737681 156737681 OE19_OESOPHAGUS 37 Missense_Mutation SNP G A uc001fqa.2 PRCC_uc001fqb.2... Hybrid_Cap... view
PRKDC p.L1244fs 8 48805816 48805817 OE19_OESOPHAGUS 37 Frame_Shift_Ins Ins - G rs67588121 uc003xqi.2 PRKDC_uc003xqj.... Hybrid_Cap...
PSIP1 p.R74fs 9 15490046 15490050 OE19_OESOPHAGUS 37 Frame_Shift_Del Del CTTTT - uc003zlv.3 PSIP1_uc003zlw.... Hybrid_Cap...
RBL1 20 35632028 35632029 OE19_OESOPHAGUS 37 Intron Ins - A rs78780584 uc002xgi.2 RBL1_uc010zvt.1... Hybrid_Cap...
RECQL4 p.R766fs 8 145738768 145738768 OE19_OESOPHAGUS 37 Frame_Shift_Del Del G - uc003zdj.2 Hybrid_Cap...
RHOA p.Y42S 3 49412898 49412898 OE19_OESOPHAGUS 37 Missense_Mutation SNP T G uc003cwu.2 RHOA_uc010hku.2... Hybrid_Cap... view
ROBO2 3 77666937 77666937 OE19_OESOPHAGUS 37 Intron Del A - rs78745603 uc003dpz.2 ROBO2_uc003dpy.... Hybrid_Cap...
RPN1 p.T403A 3 128344785 128344786 OE19_OESOPHAGUS 37 Missense_Mutation DNP TG CA rs1126828 uc003ekr.1 RPN1_uc011bkq.1... Hybrid_Cap...
RPS6KA5 14 91360733 91360734 OE19_OESOPHAGUS 37 Intron Ins - T rs77438853 uc001xys.2 RPS6KA5_uc010tw... Hybrid_Cap...
SDHD p.H30P 11 111958617 111958617 OE19_OESOPHAGUS 37 Missense_Mutation SNP A C uc001pmz.2 TIMM8B_uc001pmx... Hybrid_Cap... view
SMURF2 p.T76T 17 62589664 62589664 OE19_OESOPHAGUS 37 Silent SNP C A uc002jep.1 SMURF2_uc002jeq... Hybrid_Cap... view
SNX19 p.E283K 11 130784988 130784988 OE19_OESOPHAGUS 37 Missense_Mutation SNP C T uc001qgk.3 SNX19_uc010sce.... Hybrid_Cap... view
STAT3 p.Y672C 17 40474386 40474386 OE19_OESOPHAGUS 37 Missense_Mutation SNP T C uc002hzl.1 STAT3_uc002hzk.... Hybrid_Cap... view
TACC3 4 1739519 1739527 OE19_OESOPHAGUS 37 Intron Del GCCAT... - rs114226356 uc003gdo.2 TACC3_uc010ibz.... Hybrid_Cap...
TEC 4 48139307 48139310 OE19_OESOPHAGUS 37 3'UTR Del TTAT - rs79098351 uc003gxz.2 Hybrid_Cap...
TET2 p.G450R 4 106156384 106156384 OE19_OESOPHAGUS 37 Missense_Mutation SNP G A uc011cez.1 TET2_uc003hxk.2... Hybrid_Cap... view
TGFB2 1 218578686 218578691 OE19_OESOPHAGUS 37 Intron Del TTGTT... - rs10630101 uc001hln.2 TGFB2_uc001hll.... Hybrid_Cap...
TNRC6B p.Q1328del 22 40697177 40697179 OE19_OESOPHAGUS 37 In_Frame_Del Del GCA - rs114291931 uc011aor.1 TNRC6B_uc003aym... Hybrid_Cap...
TP53 p.N310fs 17 7576916 7576917 OE19_OESOPHAGUS 37 Frame_Shift_Ins Ins - T uc002gim.2 TP53_uc002gig.1... Hybrid_Cap...
TRPM8 p.P159L 2 234847769 234847769 OE19_OESOPHAGUS 37 Missense_Mutation SNP C T uc002vvh.2 TRPM8_uc010fyj.... Hybrid_Cap... view
TRPS1 8 116635872 116635873 OE19_OESOPHAGUS 37 5'UTR Ins - A rs76893349 uc003yny.2 TRPS1_uc011lhy.... Hybrid_Cap...
TTBK1 p.E771del 6 43250726 43250728 OE19_OESOPHAGUS 37 In_Frame_Del Del GAA - uc003ouq.1 Hybrid_Cap...
TTN p.R26512S 2 179422841 179422841 OE19_OESOPHAGUS 37 Missense_Mutation SNP T A uc010zfg.1 TTN_uc010zfh.1_... Hybrid_Cap... view
TTN p.I7634T 2 179578752 179578752 OE19_OESOPHAGUS 37 Missense_Mutation SNP A G uc010zfg.1 TTN_uc010zfh.1_... Hybrid_Cap... view
UBE2O p.R1117Q 17 74387553 74387553 OE19_OESOPHAGUS 37 Missense_Mutation SNP C T uc002jrm.3 UBE2O_uc002jrl.... Hybrid_Cap... view
VEGFC p.S419_splice 4 177605082 177605084 OE19_OESOPHAGUS 37 Splice_Site_Del Del TCA - uc003ius.1 Hybrid_Cap...
WNK1 p.R1267L 12 993365 993365 OE19_OESOPHAGUS 37 Missense_Mutation SNP G T uc001qio.3 WNK1_uc001qip.3... Hybrid_Cap... view
ZAK 2 174131512 174131512 OE19_OESOPHAGUS 37 3'UTR Del A - uc002uhz.2 Hybrid_Cap...