Annotation Summary for Cell Line: OE21  

Cell line primary name: OE21
Cell line aliases:
Gender: M
Site Primary: oesophagus
Histology: carcinoma
Hist Subtype1: squamous_cell_carcinoma
Notes:
Source: ECACC
Expression arrays:
SNP arrays: ARLES_p_NCLE_DNAAffy2_S_GenomeWideSNP_6_E09_256114
Oncomap: yes
Hybrid Capture Sequencing: yes


Mutations in OE21

GeneProtein
Change
ChrStartEnd SampleNCBI
Build
Variant
Classification
Variant TypeReference
Allele
Tumor
Allele 1
dbSNP IDAnnotation
Transcript
Other
Transcripts
Method View
Reads
Mutation
Assessor
ACACA 17 35766564 35766564 OE21_OESOPHAGUS 37 5'UTR Del A - uc002hno.2 ACACA_uc002hnn.... Hybrid_Cap...
ADAM28 8 24211994 24211997 OE21_OESOPHAGUS 37 3'UTR Del CTAT - rs10610134 uc003xdy.2 ADAM28_uc011laa... Hybrid_Cap...
AKAP12 p.1531_1532insE 6 151674116 151674117 OE21_OESOPHAGUS 37 In_Frame_Ins Ins - GAG rs34737819 uc011eep.1 AKAP12_uc003qoe... Hybrid_Cap...
AKAP9 p.1335_1336insQ 7 91652178 91652179 OE21_OESOPHAGUS 37 In_Frame_Ins Ins - AAC rs34756483 uc003ulg.2 AKAP9_uc003ule.... Hybrid_Cap...
ALPK2 p.EDTST1006del 18 56204388 56204402 OE21_OESOPHAGUS 37 In_Frame_Del Del CAGTT... - rs60644017;rs117623369 uc002lhj.3 ALPK2_uc002lhk.... Hybrid_Cap...
ARID1A 1 27107398 27107399 OE21_OESOPHAGUS 37 3'UTR Del TC - uc001bmv.1 ARID1A_uc001bmu... Hybrid_Cap...
ASPH p.A264_splice 8 62550924 62550925 OE21_OESOPHAGUS 37 Splice_Site_Ins Ins - A rs5891816 uc003xuj.2 ASPH_uc011leg.1... Hybrid_Cap...
AURKC 19 57742494 57742507 OE21_OESOPHAGUS 37 5'UTR Del GGACG... - rs67926438;rs112039303;rs59094959 uc002qoe.2 AURKC_uc002qoc.... Hybrid_Cap...
AXL p.E757K 19 41763470 41763470 OE21_OESOPHAGUS 37 Missense_Mutation SNP G A uc010ehj.2 CYP2F1_uc010xvw... Hybrid_Cap... view
BMP4 14 54416601 54416602 OE21_OESOPHAGUS 37 3'UTR Ins - AT rs74495140;rs76335800 uc001xal.3 BMP4_uc010aoh.2... Hybrid_Cap...
CACNB2 10 18828721 18828722 OE21_OESOPHAGUS 37 3'UTR Ins - AA rs3841459 uc001ipr.2 CACNB2_uc009xjz... Hybrid_Cap...
CARD10 p.KE272del 22 37906309 37906314 OE21_OESOPHAGUS 37 In_Frame_Del Del CTCCT... - uc003asx.1 CARD10_uc003ast... Hybrid_Cap...
CDK11B 1 1654066 1654068 OE21_OESOPHAGUS 37 Intron Del GCG - uc001agv.1 CDK11B_uc001aha... Hybrid_Cap...
CDKN1A 6 36653632 36653632 OE21_OESOPHAGUS 37 3'UTR SNP C T uc011dtq.1 CDKN1A_uc003omm... Hybrid_Cap... view
CHIC2 4 54876132 54876132 OE21_OESOPHAGUS 37 3'UTR Del C - rs4437313 uc003haj.1 PDGFRA_uc003haa... Hybrid_Cap...
CLTCL1 p.V1201_splice 22 19189003 19189004 OE21_OESOPHAGUS 37 Splice_Site_Ins Ins - C rs11386977 uc002zpb.2 CLTCL1_uc011agv... Hybrid_Cap...
CNTN5 p.P996S 11 100211893 100211893 OE21_OESOPHAGUS 37 Missense_Mutation SNP C T uc001pga.2 CNTN5_uc001pgb.... Hybrid_Cap... view
CREB3L2 p.T100del 7 137612914 137612916 OE21_OESOPHAGUS 37 In_Frame_Del Del TGG - uc003vtw.2 CREB3L2_uc003vt... Hybrid_Cap...
DACH1 13 72014625 72014626 OE21_OESOPHAGUS 37 3'UTR Ins - T rs117109529 uc010thn.1 DACH1_uc010tho.... Hybrid_Cap...
DDR2 1 162750211 162750212 OE21_OESOPHAGUS 37 3'UTR Del TT - uc001gcf.2 DDR2_uc001gcg.2... Hybrid_Cap...
DST 6 56473094 56473094 OE21_OESOPHAGUS 37 Intron SNP T C uc003pdf.2 DST_uc003pcz.3_... Hybrid_Cap... view
EPHA3 p.S498R 3 89448530 89448530 OE21_OESOPHAGUS 37 Missense_Mutation SNP C A uc003dqy.2 EPHA3_uc003dqx.... Hybrid_Cap... view
EPHB2 p.V495M 1 23219431 23219431 OE21_OESOPHAGUS 37 Missense_Mutation SNP G A uc009vqj.1 EPHB2_uc001bge.... Hybrid_Cap... view
ETV1 7 14028708 14028708 OE21_OESOPHAGUS 37 5'UTR Del A - rs77190713 uc011jxq.1 ETV1_uc011jxn.1... Hybrid_Cap...
FANCI p.A816G 15 89837219 89837219 OE21_OESOPHAGUS 37 Missense_Mutation SNP C G uc010bnp.1 FANCI_uc002bnm.... Hybrid_Cap... view
FGFR1OP 6 167453519 167453520 OE21_OESOPHAGUS 37 3'UTR Ins - T rs115519488 uc003qvj.2 CCR6_uc003qvl.2... Hybrid_Cap...
FLNC p.E2089K 7 128493579 128493579 OE21_OESOPHAGUS 37 Missense_Mutation SNP G A uc003vnz.3 FLNC_uc003voa.3... Hybrid_Cap... view
FN1 2 216244182 216244185 OE21_OESOPHAGUS 37 Intron Del GTAC - uc002vfa.2 FN1_uc002vfb.2_... Hybrid_Cap...
GLI2 p.S1115F 2 121746834 121746834 OE21_OESOPHAGUS 37 Missense_Mutation SNP C T uc010flp.2 GLI2_uc002tmq.1... Hybrid_Cap... view
GPR112 p.D2657del X 135474445 135474447 OE21_OESOPHAGUS 37 In_Frame_Del Del GAT - rs3030295 uc004ezu.1 GPR112_uc010nsb... Hybrid_Cap...
GRIA3 X 122318386 122318387 OE21_OESOPHAGUS 37 Splice_Site_Ins Ins - G rs66632982 uc004etq.3 GRIA3_uc004etr.... Hybrid_Cap...
GRIN2A p.A827fs 16 9862822 9862822 OE21_OESOPHAGUS 37 Frame_Shift_Del Del G - uc002czo.3 GRIN2A_uc010uym... Hybrid_Cap...
GUCY2C 12 14827464 14827466 OE21_OESOPHAGUS 37 Intron Del ATC - rs72525754;rs3083879 uc001rcd.2 GUCY2C_uc009zhz... Hybrid_Cap...
HIF1A 14 62213929 62213930 OE21_OESOPHAGUS 37 3'UTR Ins - T rs67890419 uc001xfs.2 HIF1A_uc001xfq.... Hybrid_Cap...
ILK 11 6630029 6630029 OE21_OESOPHAGUS 37 Intron Del C - uc001mee.2 ILK_uc001mef.2_... Hybrid_Cap...
ITGB4 p.D928D 17 73738664 73738664 OE21_OESOPHAGUS 37 Silent SNP C T uc002jpg.2 ITGB4_uc002jph.... Hybrid_Cap... view
ITPR2 p.R470_splice 12 26834804 26834805 OE21_OESOPHAGUS 37 Splice_Site_Ins Ins - ACTC rs66696203;rs59199365 uc001rhg.2 Hybrid_Cap...
KLK3 19 51363275 51363275 OE21_OESOPHAGUS 37 3'UTR SNP C T uc002pts.1 KLK3_uc010ycj.1... Hybrid_Cap... view
MAF 16 79628537 79628537 OE21_OESOPHAGUS 37 Intron Del T - uc002ffm.2 MAF_uc002ffn.2_... Hybrid_Cap...
MAML3 p.Q767_splice 4 140651585 140651587 OE21_OESOPHAGUS 37 Splice_Site_Del Del CTG - uc003ihz.1 MGST2_uc010ioi.... Hybrid_Cap...
MAP2K2 p.M150T 19 4110508 4110508 OE21_OESOPHAGUS 37 Missense_Mutation SNP A G uc002lzk.2 Hybrid_Cap... view
MAP3K1 p.T949del 5 56177849 56177851 OE21_OESOPHAGUS 37 In_Frame_Del Del CAA - uc003jqw.3 Hybrid_Cap...
MAP3K14 p.R218_splice 17 43364293 43364294 OE21_OESOPHAGUS 37 Splice_Site_Ins Ins - G rs66766023 uc002iiw.1 MAP3K14_uc010da... Hybrid_Cap...
MAPKAPK3 3 50685575 50685575 OE21_OESOPHAGUS 37 3'UTR Del A - rs76026164 uc003day.1 MAPKAPK3_uc003d... Hybrid_Cap...
MLL p.E1690K 11 118363835 118363835 OE21_OESOPHAGUS 37 Missense_Mutation SNP G A uc001ptb.2 MLL_uc001pta.2_... Hybrid_Cap... view
MLLT3 9 20346377 20346378 OE21_OESOPHAGUS 37 3'UTR Ins - A rs66943046 uc003zoe.2 MLLT3_uc011lne.... Hybrid_Cap...
MYST4 p.E1104del 10 76781906 76781908 OE21_OESOPHAGUS 37 In_Frame_Del Del GAA - rs79644703 uc001jwn.1 MYST4_uc001jwm.... Hybrid_Cap...
MYT1 20 62871805 62871805 OE21_OESOPHAGUS 37 3'UTR SNP G T uc002yii.2 MYT1_uc002yij.2... Hybrid_Cap... view
NCAM1 11 112832307 112832308 OE21_OESOPHAGUS 37 5'UTR Ins - A rs117108942 uc009yyq.1 NCAM1_uc001pno.... Hybrid_Cap...
NCAM1 11 112832340 112832340 OE21_OESOPHAGUS 37 5'UTR Del C - uc009yyq.1 NCAM1_uc001pno.... Hybrid_Cap...
NCOA3 p.QQQ1272del 20 46279815 46279823 OE21_OESOPHAGUS 37 In_Frame_Del Del GCAGC... - uc002xtk.2 NCOA3_uc010ght.... Hybrid_Cap...
NFKBIA 14 35871136 35871138 OE21_OESOPHAGUS 37 3'UTR Del TTC - rs112369437 uc001wtf.3 NFKBIA_uc001wte... Hybrid_Cap...
NOTCH1 p.H371R 9 139412732 139412732 OE21_OESOPHAGUS 37 Missense_Mutation SNP T C uc004chz.2 Hybrid_Cap... view
NR1H2 p.176_177insQ 19 50881820 50881821 OE21_OESOPHAGUS 37 In_Frame_Ins Ins - AAC rs66783852;rs112359270 uc010enw.2 NR1H2_uc002prv.... Hybrid_Cap...
NUDT11 X 51234508 51234508 OE21_OESOPHAGUS 37 3'UTR SNP A G uc010njt.2 Hybrid_Cap... view
PAX3 2 223158653 223158653 OE21_OESOPHAGUS 37 Intron Del T - rs112753212 uc002vmt.1 PAX3_uc002vmy.1... Hybrid_Cap...
PAX5 9 36840419 36840419 OE21_OESOPHAGUS 37 3'UTR SNP G A uc003zzo.1 PAX5_uc011lpt.1... Hybrid_Cap... view
PDE4DIP p.Q1665fs 1 144873963 144873963 OE21_OESOPHAGUS 37 Frame_Shift_Del Del T - uc001elw.3 NBPF10_uc009wir... Hybrid_Cap...
PDE4DIP p.V486fs 1 144917828 144917828 OE21_OESOPHAGUS 37 Frame_Shift_Del Del A - uc001elw.3 NBPF10_uc009wir... Hybrid_Cap...
PIK3C2G p.P129del 12 18435399 18435401 OE21_OESOPHAGUS 37 In_Frame_Del Del CCC - uc010sib.1 PIK3C2G_uc001rd... Hybrid_Cap...
PRKDC p.L1244fs 8 48805816 48805817 OE21_OESOPHAGUS 37 Frame_Shift_Ins Ins - G rs67588121 uc003xqi.2 PRKDC_uc003xqj.... Hybrid_Cap...
PTPRU p.G893S 1 29630537 29630537 OE21_OESOPHAGUS 37 Missense_Mutation SNP G A uc001bru.2 PTPRU_uc001brv.... Hybrid_Cap... view
RAC1 7 6442143 6442143 OE21_OESOPHAGUS 37 3'UTR Del C - rs2303366 uc003spw.2 RAC1_uc003spx.2... Hybrid_Cap...
RAC1 7 6442152 6442152 OE21_OESOPHAGUS 37 3'UTR SNP A C rs35359875 uc003spw.2 RAC1_uc003spx.2... Hybrid_Cap... view
RECQL4 p.R766fs 8 145738768 145738768 OE21_OESOPHAGUS 37 Frame_Shift_Del Del G - uc003zdj.2 Hybrid_Cap...
RIMS2 p.Q19H 8 104513171 104513171 OE21_OESOPHAGUS 37 Missense_Mutation SNP G C uc003ylp.2 Hybrid_Cap... view
RIPK2 p.S363F 8 90798879 90798879 OE21_OESOPHAGUS 37 Missense_Mutation SNP C T uc003yee.2 RIPK2_uc003yef.... Hybrid_Cap... view
RPS6KA5 14 91360733 91360734 OE21_OESOPHAGUS 37 Intron Ins - T rs77438853 uc001xys.2 RPS6KA5_uc010tw... Hybrid_Cap...
RPS6KB1 17 58024224 58024225 OE21_OESOPHAGUS 37 3'UTR Ins - AA rs67846207 uc002ixy.2 RPS6KB1_uc010dd... Hybrid_Cap...
SP1 p.R669H 12 53803307 53803307 OE21_OESOPHAGUS 37 Missense_Mutation SNP G A uc001scw.2 SP1_uc010sog.1_... Hybrid_Cap... view
STK31 7 23872024 23872025 OE21_OESOPHAGUS 37 3'UTR Ins - TTTG rs66787534 uc003sws.3 STK31_uc003swt.... Hybrid_Cap...
STK32A 5 146728339 146728339 OE21_OESOPHAGUS 37 Intron SNP C T uc011dbw.1 STK32A_uc003lol... Hybrid_Cap... view
TAL1 p.G269D 1 47685582 47685582 OE21_OESOPHAGUS 37 Missense_Mutation SNP C T uc001cqx.2 TAL1_uc009vyq.2... Hybrid_Cap... view
TBX18 p.P170S 6 85470064 85470064 OE21_OESOPHAGUS 37 Missense_Mutation SNP G A uc003pkl.1 TBX18_uc010kbq.... Hybrid_Cap... view
TCF21 6 134210497 134210498 OE21_OESOPHAGUS 37 5'UTR Ins - TCTC rs35199378 uc003qei.3 TCF21_uc003qej.... Hybrid_Cap...
TMEM123 11 102269398 102269398 OE21_OESOPHAGUS 37 3'UTR Del G - uc001pha.2 TMEM123_uc009yx... Hybrid_Cap...
TNKS2 10 93622951 93622959 OE21_OESOPHAGUS 37 3'UTR Del GTTTT... - rs115539654 uc001khp.2 Hybrid_Cap...
TP63 3 189507518 189507519 OE21_OESOPHAGUS 37 Intron Ins - AG rs62702062;rs79714037 uc003fry.2 TP63_uc003frx.2... Hybrid_Cap...
TRIM28 p.R330W 19 59059434 59059434 OE21_OESOPHAGUS 37 Missense_Mutation SNP C T uc002qtg.1 TRIM28_uc010eut... Hybrid_Cap... view
TRIM37 p.S270_splice 17 57141768 57141769 OE21_OESOPHAGUS 37 Splice_Site_Ins Ins - A uc002iwy.3 TRIM37_uc002iwz... Hybrid_Cap...
TTN 2 179391639 179391640 OE21_OESOPHAGUS 37 3'UTR Ins - T rs36037175 uc010zfg.1 TTN_uc010zfh.1_... Hybrid_Cap...
TTN p.D3214N 2 179631171 179631171 OE21_OESOPHAGUS 37 Missense_Mutation SNP C T uc010zfg.1 TTN_uc010zfh.1_... Hybrid_Cap... view
UNC13C p.D1718H 15 54792368 54792368 OE21_OESOPHAGUS 37 Missense_Mutation SNP G C uc002ack.2 Hybrid_Cap... view
VEGFC p.S419_splice 4 177605082 177605084 OE21_OESOPHAGUS 37 Splice_Site_Del Del TCA - uc003ius.1 Hybrid_Cap...
VPS13B 8 100887922 100887923 OE21_OESOPHAGUS 37 3'UTR Del TG - uc003yiv.2 VPS13B_uc003yiw... Hybrid_Cap...