Annotation Summary for Cell Line: OE33  

Cell line primary name: OE33
Cell line aliases:
Gender: F
Site Primary: oesophagus
Histology: other
Hist Subtype1: metaplasia
Notes:
Source: ECACC
Expression arrays: BRAKE_p_NCLE_RNA2_HG-U133_Plus_2_C02_241092
SNP arrays: ARLES_p_NCLE_DNAAffy2_S_GenomeWideSNP_6_D08_256088
Oncomap: yes
Hybrid Capture Sequencing: yes


Mutations in OE33

GeneProtein
Change
ChrStartEnd SampleNCBI
Build
Variant
Classification
Variant TypeReference
Allele
Tumor
Allele 1
dbSNP IDAnnotation
Transcript
Other
Transcripts
Method View
Reads
Mutation
Assessor
AAK1 p.541_542QQ>Q 2 69741754 69741756 OE33_OESOPHAGUS 37 In_Frame_Del Del TGT - rs55712143 uc002sfp.2 AAK1_uc010fdk.2... Hybrid_Cap...
ACACA 17 35766564 35766564 OE33_OESOPHAGUS 37 5'UTR Del A - uc002hno.2 ACACA_uc002hnn.... Hybrid_Cap...
ADAM17 2 9630245 9630245 OE33_OESOPHAGUS 37 3'UTR Del T - uc002qzu.2 IAH1_uc010yiz.1... Hybrid_Cap...
ADAM28 8 24211994 24211997 OE33_OESOPHAGUS 37 3'UTR Del CTAT - rs10610134 uc003xdy.2 ADAM28_uc011laa... Hybrid_Cap...
AIM1 p.T820S 6 106968765 106968765 OE33_OESOPHAGUS 37 Missense_Mutation SNP A T uc003prh.2 Hybrid_Cap... view
AKAP9 p.1335_1336insQ 7 91652178 91652179 OE33_OESOPHAGUS 37 In_Frame_Ins Ins - AAC rs34756483 uc003ulg.2 AKAP9_uc003ule.... Hybrid_Cap...
AURKC 19 57742494 57742507 OE33_OESOPHAGUS 37 5'UTR Del GGACG... - rs67926438;rs112039303;rs59094959 uc002qoe.2 AURKC_uc002qoc.... Hybrid_Cap...
BLM p.T1015I 15 91337421 91337421 OE33_OESOPHAGUS 37 Missense_Mutation SNP C T uc002bpr.2 BLM_uc010uqh.1_... Hybrid_Cap... view
BLM p.S1209T 15 91347463 91347463 OE33_OESOPHAGUS 37 Missense_Mutation SNP T A rs1801256 uc002bpr.2 BLM_uc010uqh.1_... Hybrid_Cap... view
BMP4 14 54416601 54416602 OE33_OESOPHAGUS 37 3'UTR Ins - A rs74495140;rs76335800 uc001xal.3 BMP4_uc010aoh.2... Hybrid_Cap...
CACNA1F p.815_815E>EE X 49076224 49076225 OE33_OESOPHAGUS 37 In_Frame_Ins Ins - TCC uc004dnb.2 CACNA1F_uc010ni... Hybrid_Cap...
CACNB2 10 18828721 18828722 OE33_OESOPHAGUS 37 3'UTR Ins - AA rs3841459 uc001ipr.2 CACNB2_uc009xjz... Hybrid_Cap...
CCNB1IP1 p.W96C 14 20784395 20784395 OE33_OESOPHAGUS 37 Missense_Mutation SNP C A uc001vwv.2 CCNB1IP1_uc001v... Hybrid_Cap... view
CDC25A 3 48200281 48200281 OE33_OESOPHAGUS 37 3'UTR SNP T C uc003csh.1 CDC25A_uc003csi... Hybrid_Cap... view
CLTCL1 p.V1201_splice 22 19189003 19189004 OE33_OESOPHAGUS 37 Splice_Site_Ins Ins - C rs11386977 uc002zpb.2 CLTCL1_uc011agv... Hybrid_Cap...
CNTN1 p.S224R 12 41323771 41323771 OE33_OESOPHAGUS 37 Missense_Mutation SNP A C uc001rmm.1 CNTN1_uc009zjy.... Hybrid_Cap... view
CNTN5 p.E680D 11 100126526 100126526 OE33_OESOPHAGUS 37 Missense_Mutation SNP G T uc001pga.2 CNTN5_uc001pfz.... Hybrid_Cap... view
COL18A1 p.P958T 21 46901892 46901892 OE33_OESOPHAGUS 37 Missense_Mutation SNP C A uc011afs.1 COL18A1_uc002zh... Hybrid_Cap... view
CUBN p.D2417E 10 16957131 16957131 OE33_OESOPHAGUS 37 Missense_Mutation SNP G C uc001ioo.2 Hybrid_Cap... view
CXCL12 10 44873992 44873993 OE33_OESOPHAGUS 37 Intron Ins - CT rs117617571 uc001jbh.2 CXCL12_uc001jbf... Hybrid_Cap...
CYP19A1 p.F406C 15 51504563 51504563 OE33_OESOPHAGUS 37 Missense_Mutation SNP A C uc001zyz.3 CYP19A1_uc001zz... Hybrid_Cap... view
CYP1B1 2 38297654 38297655 OE33_OESOPHAGUS 37 3'UTR Ins - A rs9341258 uc002rqo.2 Hybrid_Cap...
DACH1 13 72014625 72014626 OE33_OESOPHAGUS 37 3'UTR Ins - T rs117109529 uc010thn.1 DACH1_uc010tho.... Hybrid_Cap...
DDR2 1 162750211 162750213 OE33_OESOPHAGUS 37 3'UTR Del TTT - uc001gcf.2 DDR2_uc001gcg.2... Hybrid_Cap...
DLC1 p.S1012I 8 12956040 12956040 OE33_OESOPHAGUS 37 Missense_Mutation SNP C A uc003wwm.2 DLC1_uc003wwk.1... Hybrid_Cap... view
DYRK1A 21 38884966 38884967 OE33_OESOPHAGUS 37 3'UTR Ins - T rs72430212 uc002ywk.2 DYRK1A_uc002ywi... Hybrid_Cap...
EIF4B p.YRDG241del 12 53421593 53421604 OE33_OESOPHAGUS 37 In_Frame_Del Del GGTAT... - uc010snu.1 EIF4B_uc009zmp.... Hybrid_Cap...
EPHA5 4 66189753 66189754 OE33_OESOPHAGUS 37 3'UTR Ins - T rs67487372 uc011cah.1 EPHA5_uc003hcx.... Hybrid_Cap...
EPHA6 3 97367230 97367231 OE33_OESOPHAGUS 37 Intron Ins - A rs115253553 uc010how.1 EPHA6_uc003drs.... Hybrid_Cap...
EPHA6 3 97467610 97467611 OE33_OESOPHAGUS 37 3'UTR Ins - CT uc010how.1 Hybrid_Cap...
FANCM p.G1235V 14 45645661 45645661 OE33_OESOPHAGUS 37 Missense_Mutation SNP G T uc001wwd.3 FANCM_uc010anf.... Hybrid_Cap... view
FGFR1OP 6 167453519 167453520 OE33_OESOPHAGUS 37 3'UTR Ins - T rs115519488 uc003qvj.2 CCR6_uc003qvl.2... Hybrid_Cap...
FLI1 11 128638217 128638217 OE33_OESOPHAGUS 37 Intron Del G - uc010sbu.1 FLI1_uc010sbt.1... Hybrid_Cap...
FN1 2 216244182 216244185 OE33_OESOPHAGUS 37 Intron Del GTAC - uc002vfa.2 FN1_uc002vfb.2_... Hybrid_Cap...
GPR112 p.D2657del X 135474445 135474447 OE33_OESOPHAGUS 37 In_Frame_Del Del GAT - rs3030295 uc004ezu.1 GPR112_uc010nsb... Hybrid_Cap...
GRIA3 X 122318386 122318387 OE33_OESOPHAGUS 37 Splice_Site_Ins Ins - G rs66632982 uc004etq.3 GRIA3_uc004etr.... Hybrid_Cap...
GSK3B 3 119812334 119812334 OE33_OESOPHAGUS 37 5'UTR SNP T G uc003edn.2 GSK3B_uc003edo.... Hybrid_Cap... view
GUCY2C 12 14827464 14827466 OE33_OESOPHAGUS 37 Intron Del ATC - rs72525754;rs3083879 uc001rcd.2 GUCY2C_uc009zhz... Hybrid_Cap...
HIF1A 14 62213929 62213930 OE33_OESOPHAGUS 37 3'UTR Ins - T rs67890419 uc001xfs.2 HIF1A_uc001xfq.... Hybrid_Cap...
IL1R2 p.R64C 2 102626146 102626146 OE33_OESOPHAGUS 37 Missense_Mutation SNP C T uc002tbm.2 IL1R2_uc002tbn.... Hybrid_Cap... view
ILK 11 6630029 6630029 OE33_OESOPHAGUS 37 Intron Del C - uc001mee.2 ILK_uc001mef.2_... Hybrid_Cap...
ITGA10 p.Q152P 1 145528658 145528658 OE33_OESOPHAGUS 37 Missense_Mutation SNP A C uc001eoa.2 NBPF10_uc001emp... Hybrid_Cap... view
ITPR2 p.R470_splice 12 26834804 26834805 OE33_OESOPHAGUS 37 Splice_Site_Ins Ins - ACTC rs66696203;rs59199365 uc001rhg.2 Hybrid_Cap...
KLK7 19 51480672 51480675 OE33_OESOPHAGUS 37 3'UTR Del GGTT - uc002puo.2 KLK7_uc002pup.2... Hybrid_Cap...
LATS2 13 21620222 21620223 OE33_OESOPHAGUS 37 5'UTR Ins - A rs61240127;rs115723063 uc009zzs.2 LATS2_uc001unr.... Hybrid_Cap...
LMNB2 p.R239Q 19 2435138 2435138 OE33_OESOPHAGUS 37 Missense_Mutation SNP C T uc002lwa.1 LMNB2_uc002lvy.... Hybrid_Cap... view
LRRK2 p.E193D 12 40634292 40634292 OE33_OESOPHAGUS 37 Missense_Mutation SNP G T uc001rmg.3 Hybrid_Cap... view
LZTR1 22 21348741 21348741 OE33_OESOPHAGUS 37 Intron SNP C T rs75177448 uc002zto.2 LZTR1_uc002ztn.... Hybrid_Cap... view
MAF 16 79628537 79628537 OE33_OESOPHAGUS 37 Intron Del T - uc002ffm.2 MAF_uc002ffn.2_... Hybrid_Cap...
MAML3 p.Q767_splice 4 140651585 140651587 OE33_OESOPHAGUS 37 Splice_Site_Del Del CTG - uc003ihz.1 MGST2_uc010ioi.... Hybrid_Cap...
MAP2K1 15 66679649 66679650 OE33_OESOPHAGUS 37 5'UTR Ins - C rs67229745 uc010bhq.2 Hybrid_Cap...
MAP3K1 p.T949del 5 56177849 56177851 OE33_OESOPHAGUS 37 In_Frame_Del Del CAA - uc003jqw.3 Hybrid_Cap...
MAP3K14 p.R218_splice 17 43364293 43364294 OE33_OESOPHAGUS 37 Splice_Site_Ins Ins - G rs66766023 uc002iiw.1 MAP3K14_uc010da... Hybrid_Cap...
MAPKAPK3 3 50685575 50685575 OE33_OESOPHAGUS 37 3'UTR Del A - rs76026164 uc003day.1 MAPKAPK3_uc003d... Hybrid_Cap...
MAPKBP1 p.S88N 15 42103137 42103137 OE33_OESOPHAGUS 37 Missense_Mutation SNP G A uc001zok.3 MAPKBP1_uc001zo... Hybrid_Cap... view
MET p.V1007I 7 116411980 116411980 OE33_OESOPHAGUS 37 Missense_Mutation SNP G A uc010lkh.2 MET_uc003vij.2_... Hybrid_Cap... view
MGA p.L1762M 15 42040906 42040906 OE33_OESOPHAGUS 37 Missense_Mutation SNP T A uc010ucy.1 MGA_uc010ucz.1_... Hybrid_Cap... view
MGC42105 5 43245846 43245846 OE33_OESOPHAGUS 37 5'UTR SNP C T uc003jno.2 Hybrid_Cap... view
NCAM1 11 112832307 112832308 OE33_OESOPHAGUS 37 5'UTR Ins - A rs117108942 uc009yyq.1 NCAM1_uc001pno.... Hybrid_Cap...
NCAM1 11 112832340 112832340 OE33_OESOPHAGUS 37 5'UTR Del C - uc009yyq.1 NCAM1_uc001pno.... Hybrid_Cap...
NCOA3 p.Q1276del 20 46279837 46279839 OE33_OESOPHAGUS 37 In_Frame_Del Del CAG - rs2664555 uc002xtk.2 NCOA3_uc010ght.... Hybrid_Cap...
NEK3 p.K313_splice 13 52718050 52718051 OE33_OESOPHAGUS 37 Splice_Site_Ins Ins - T rs72514762 uc001vgh.2 NEK3_uc001vgg.2... Hybrid_Cap...
NIN p.Q1688K 14 51214712 51214712 OE33_OESOPHAGUS 37 Missense_Mutation SNP G T uc001wyi.2 NIN_uc001wyj.2_... Hybrid_Cap... view
NPAT 11 108042860 108042860 OE33_OESOPHAGUS 37 Intron SNP A G uc001pjz.3 NPAT_uc010rvv.1... Hybrid_Cap... view
NPM1 5 170837734 170837734 OE33_OESOPHAGUS 37 3'UTR Del T - uc011dex.1 NPM1_uc003mbi.2... Hybrid_Cap...
NPR1 1 153665919 153665920 OE33_OESOPHAGUS 37 3'UTR Ins - C rs66682713 uc001fcs.3 NPR1_uc010pdz.1... Hybrid_Cap...
NR1H2 p.176_177insQ 19 50881820 50881821 OE33_OESOPHAGUS 37 In_Frame_Ins Ins - AAC rs66783852;rs112359270 uc010enw.2 NR1H2_uc002prv.... Hybrid_Cap...
NYNRIN p.R757C 14 24879269 24879269 OE33_OESOPHAGUS 37 Missense_Mutation SNP C T uc001wpf.3 Hybrid_Cap... view
PAX3 2 223158653 223158653 OE33_OESOPHAGUS 37 Intron Del T - rs112753212 uc002vmt.1 PAX3_uc002vmy.1... Hybrid_Cap...
PAX5 9 37034095 37034095 OE33_OESOPHAGUS 37 5'UTR Del C - uc003zzo.1 PAX5_uc011lpw.1... Hybrid_Cap...
PDE4DIP 1 144994865 144994865 OE33_OESOPHAGUS 37 5'UTR SNP G A uc001elw.3 NBPF10_uc009wir... Hybrid_Cap... view
PGR 11 100933598 100933599 OE33_OESOPHAGUS 37 Intron Ins - AATGA rs35148438 uc001pgh.2 PGR_uc001pgg.2_... Hybrid_Cap...
PHIP 6 79650265 79650266 OE33_OESOPHAGUS 37 3'UTR Ins - T rs70977753;rs13191571 uc003pir.2 PHIP_uc003piq.2... Hybrid_Cap...
PHKG2 16 30763046 30763047 OE33_OESOPHAGUS 37 Intron Ins - T uc002dzi.1 PHKG2_uc002dzj.... Hybrid_Cap...
PIK3C2G 12 18800990 18800990 OE33_OESOPHAGUS 37 3'UTR Del A - rs16914368 uc010sib.1 PIK3C2G_uc001rd... Hybrid_Cap...
PIK3CG p.L1092H 7 106545798 106545798 OE33_OESOPHAGUS 37 Missense_Mutation SNP T A uc003vdv.3 PIK3CG_uc003vdu... Hybrid_Cap... view
PPP3R2 p.D107Y 9 104356894 104356894 OE33_OESOPHAGUS 37 Missense_Mutation SNP C A uc004bbr.2 GRIN3A_uc004bbp... Hybrid_Cap... view
PRKCA 17 64298959 64298960 OE33_OESOPHAGUS 37 5'UTR Ins - G rs71160558 uc002jfp.1 PRKCA_uc002jfo.... Hybrid_Cap...
PRKDC p.L1244fs 8 48805816 48805817 OE33_OESOPHAGUS 37 Frame_Shift_Ins Ins - G rs67588121 uc003xqi.2 PRKDC_uc003xqj.... Hybrid_Cap...
PRKG1 p.T532fs 10 54041963 54041963 OE33_OESOPHAGUS 37 Frame_Shift_Del Del T - uc001jjo.2 PRKG1_uc001jjm.... Hybrid_Cap...
RAP1GDS1 4 99363413 99363413 OE33_OESOPHAGUS 37 3'UTR SNP C A uc003htw.3 RAP1GDS1_uc003h... Hybrid_Cap... view
RASGRF1 15 79277150 79277151 OE33_OESOPHAGUS 37 Intron Ins - C rs67045840;rs77640668 uc002beq.2 RASGRF1_uc002be... Hybrid_Cap...
RECQL4 p.R766fs 8 145738768 145738768 OE33_OESOPHAGUS 37 Frame_Shift_Del Del G - uc003zdj.2 Hybrid_Cap...
ROS1 p.F1295V 6 117678050 117678050 OE33_OESOPHAGUS 37 Missense_Mutation SNP A C uc003pxp.1 ROS1_uc011ebi.1... Hybrid_Cap... view
RPS6KA5 14 91360733 91360734 OE33_OESOPHAGUS 37 Intron Ins - T rs77438853 uc001xys.2 RPS6KA5_uc010tw... Hybrid_Cap...
RPS6KL1 14 75373626 75373627 OE33_OESOPHAGUS 37 3'UTR Ins - TGAT uc001xqx.1 RPS6KL1_uc001xq... Hybrid_Cap...
SEPT9 17 75471864 75471865 OE33_OESOPHAGUS 37 Intron Del AG - uc002jts.3 SEPT9_uc010wtk.... Hybrid_Cap...
SLC6A8 X 152957656 152957657 OE33_OESOPHAGUS 37 Intron Ins - A uc004fib.3 SLC6A8_uc004fic... Hybrid_Cap...
SMC2 p.A498P 9 106876322 106876322 OE33_OESOPHAGUS 37 Missense_Mutation SNP G C uc004bbv.2 SMC2_uc004bbu.1... Hybrid_Cap... view
SMG1 p.D894A 16 18880578 18880578 OE33_OESOPHAGUS 37 Missense_Mutation SNP T G uc002dfm.2 SMG1_uc010bwb.2... Hybrid_Cap... view
STK25 2 242435659 242435662 OE33_OESOPHAGUS 37 Intron Del AAGG - rs3215138;rs75497042 uc002wbm.2 STK25_uc002wbk.... Hybrid_Cap...
TMEM123 11 102269398 102269398 OE33_OESOPHAGUS 37 3'UTR Del G - uc001pha.2 TMEM123_uc009yx... Hybrid_Cap...
TNFRSF13C 22 42321309 42321309 OE33_OESOPHAGUS 37 3'UTR SNP T C uc010gyp.1 WBP2NL_uc011ape... Hybrid_Cap... view
TP53 p.C135Y 17 7578526 7578526 OE33_OESOPHAGUS 37 Missense_Mutation SNP C T uc002gim.2 TP53_uc002gig.1... Hybrid_Cap... view
TRIM37 p.C109S 17 57161406 57161406 OE33_OESOPHAGUS 37 Missense_Mutation SNP C G rs121908391 uc002iwy.3 TRIM37_uc002iwz... Hybrid_Cap... view
TTN p.9928_9928E>EE 2 179544685 179544686 OE33_OESOPHAGUS 37 In_Frame_Ins Ins - TCT uc010zfg.1 TTN_uc010zfh.1_... Hybrid_Cap...
TTN p.G7153W 2 179582412 179582412 OE33_OESOPHAGUS 37 Missense_Mutation SNP C A uc010zfg.1 TTN_uc010zfh.1_... Hybrid_Cap... view
UNC13C p.K2198N 15 54919260 54919260 OE33_OESOPHAGUS 37 Missense_Mutation SNP A C uc002ack.2 UNC13C_uc002acm... Hybrid_Cap... view
VEGFC p.S419_splice 4 177605082 177605084 OE33_OESOPHAGUS 37 Splice_Site_Del Del TCA - uc003ius.1 Hybrid_Cap...
VPS13B 8 100887922 100887923 OE33_OESOPHAGUS 37 3'UTR Del TG - uc003yiv.2 VPS13B_uc003yiw... Hybrid_Cap...
WLS 1 68698080 68698080 OE33_OESOPHAGUS 37 5'UTR SNP T C uc001dee.2 WLS_uc001def.1_... Hybrid_Cap... view
ZAK p.R224_splice 2 174068520 174068522 OE33_OESOPHAGUS 37 Splice_Site_Del Del GTA - uc002uhz.2 ZAK_uc002uhx.2_... Hybrid_Cap...