Annotation Summary for Cell Line: OVISE  

Cell line primary name: OVISE
Cell line aliases:
Gender: F
Site Primary: ovary
Histology: carcinoma
Hist Subtype1: clear_cell_carcinoma
Notes:
Source: HSRRB
Expression arrays: NIECE_p_NCLE_RNA3_HG-U133_Plus_2_A03_295994
SNP arrays: FASTS_p_NCLE_DNAAffy4_S_GenomeWideSNP_6_G05_335340
Oncomap: yes
Hybrid Capture Sequencing: yes


Mutations in OVISE

GeneProtein
Change
ChrStartEnd SampleNCBI
Build
Variant
Classification
Variant TypeReference
Allele
Tumor
Allele 1
dbSNP IDAnnotation
Transcript
Other
Transcripts
Method View
Reads
Mutation
Assessor
ABCC3 17 48745203 48745203 OVISE_OVARY 37 Intron Del C - uc002isl.2 ABCC3_uc002isk.... Hybrid_Cap...
ADAM28 8 24211994 24211997 OVISE_OVARY 37 3'UTR Del CTAT - rs10610134 uc003xdy.2 ADAM28_uc011laa... Hybrid_Cap...
ADK 10 76468205 76468205 OVISE_OVARY 37 3'UTR SNP G A uc001jwi.2 ADK_uc010qlb.1_... Hybrid_Cap... view
AKAP6 p.C1700Y 14 33292118 33292118 OVISE_OVARY 37 Missense_Mutation SNP G A uc001wrq.2 Hybrid_Cap... view
ALDH7A1 p.H339R 5 125891700 125891700 OVISE_OVARY 37 Missense_Mutation SNP T C uc003ktx.2 ALDH7A1_uc003kt... Hybrid_Cap... view
ALPK1 4 113347609 113347610 OVISE_OVARY 37 Intron Ins - T rs68137453 uc003iap.3 ALPK1_uc003ian.... Hybrid_Cap...
APC p.D807G 5 112173711 112173711 OVISE_OVARY 37 Missense_Mutation SNP A G uc010jby.2 APC_uc011cvt.1_... Hybrid_Cap... view
APC p.L2342F 5 112178317 112178317 OVISE_OVARY 37 Missense_Mutation SNP A T uc010jby.2 APC_uc011cvt.1_... Hybrid_Cap... view
ARID1A p.H203fs 1 27023501 27023502 OVISE_OVARY 37 Frame_Shift_Ins Ins - A uc001bmv.1 ARID1A_uc001bmt... Hybrid_Cap...
ASPH p.A264_splice 8 62550924 62550925 OVISE_OVARY 37 Splice_Site_Ins Ins - A rs5891816 uc003xuj.2 ASPH_uc011leg.1... Hybrid_Cap...
BLM p.D239H 15 91293213 91293213 OVISE_OVARY 37 Missense_Mutation SNP G C uc002bpr.2 BLM_uc010uqh.1_... Hybrid_Cap... view
BRD4 p.W81L 19 15383669 15383669 OVISE_OVARY 37 Missense_Mutation SNP C A uc002nar.2 BRD4_uc002nas.2... Hybrid_Cap... view
CACNB2 10 18828721 18828722 OVISE_OVARY 37 3'UTR Ins - AA rs3841459 uc001ipr.2 CACNB2_uc009xjz... Hybrid_Cap...
CATSPERB p.V617M 14 92091245 92091245 OVISE_OVARY 37 Missense_Mutation SNP C T uc001xzs.1 CATSPERB_uc010a... Hybrid_Cap... view
CDK11B p.E117V 1 1650772 1650772 OVISE_OVARY 37 Missense_Mutation SNP T A uc001agv.1 CDK11B_uc001ags... Hybrid_Cap... view
CEP110 9 123939634 123939634 OVISE_OVARY 37 3'UTR SNP C A uc004bkx.1 CEP110_uc004blb... Hybrid_Cap... view
CLTCL1 p.V1201_splice 22 19189003 19189004 OVISE_OVARY 37 Splice_Site_Ins Ins - C rs11386977 uc002zpb.2 CLTCL1_uc011agv... Hybrid_Cap...
CLTCL1 p.K96N 22 19241713 19241713 OVISE_OVARY 37 Missense_Mutation SNP C G uc002zpb.2 CLTCL1_uc011agv... Hybrid_Cap... view
DLC1 p.H1105R 8 12952608 12952608 OVISE_OVARY 37 Missense_Mutation SNP T C uc003wwm.2 DLC1_uc003wwk.1... Hybrid_Cap... view
EIF4G1 p.E638Q 3 184040704 184040704 OVISE_OVARY 37 Missense_Mutation SNP G C uc010hxx.2 EIF4G1_uc003fno... Hybrid_Cap... view
EPHA1 p.M677L 7 143092466 143092466 OVISE_OVARY 37 Missense_Mutation SNP T G uc003wcz.2 Hybrid_Cap... view
EPHA6 3 97367230 97367231 OVISE_OVARY 37 Intron Ins - A rs115253553 uc010how.1 EPHA6_uc003drs.... Hybrid_Cap...
ERCC4 p.R463K 16 14029177 14029177 OVISE_OVARY 37 Missense_Mutation SNP G A uc002dce.2 ERCC4_uc010uyz.... Hybrid_Cap... view
FGFR1OP 6 167453519 167453520 OVISE_OVARY 37 3'UTR Ins - T rs115519488 uc003qvj.2 CCR6_uc003qvl.2... Hybrid_Cap...
FGFR4 p.D127H 5 176517769 176517769 OVISE_OVARY 37 Missense_Mutation SNP G C uc003mfl.2 FGFR4_uc003mfm.... Hybrid_Cap... view
FLNB p.T907M 3 58098020 58098020 OVISE_OVARY 37 Missense_Mutation SNP C T uc010hne.2 FLNB_uc003djj.2... Hybrid_Cap... view
FN1 p.E884G 2 216271912 216271912 OVISE_OVARY 37 Missense_Mutation SNP T C uc002vfa.2 FN1_uc002vfb.2_... Hybrid_Cap... view
FOXP1 3 71008341 71008342 OVISE_OVARY 37 3'UTR Ins - T rs11433724;rs114233617 uc003dol.2 FOXP1_uc003dom.... Hybrid_Cap...
GPR112 p.D2657del X 135474445 135474447 OVISE_OVARY 37 In_Frame_Del Del GAT - rs3030295 uc004ezu.1 GPR112_uc010nsb... Hybrid_Cap...
GRIA3 X 122318386 122318387 OVISE_OVARY 37 Splice_Site_Ins Ins - G rs66632982 uc004etq.3 GRIA3_uc004etr.... Hybrid_Cap...
HNRNPH1 5 179048234 179048234 OVISE_OVARY 37 Intron SNP A G uc003mkf.3 HNRNPH1_uc003mk... Hybrid_Cap... view
HOXC11 12 54369281 54369281 OVISE_OVARY 37 3'UTR SNP C G uc001sem.2 Hybrid_Cap... view
HSP90B1 p.E791del 12 104341188 104341190 OVISE_OVARY 37 In_Frame_Del Del GAA - rs117491163 uc001tkb.1 HSP90B1_uc010sw... Hybrid_Cap...
ILK 11 6630029 6630029 OVISE_OVARY 37 Intron Del C - uc001mee.2 ILK_uc001mef.2_... Hybrid_Cap...
ITPR2 p.VNA187del 12 26869133 26869141 OVISE_OVARY 37 In_Frame_Del Del CTGCA... - uc001rhg.2 ITPR2_uc001rhh.... Hybrid_Cap...
KALRN p.N2973S 3 124438274 124438274 OVISE_OVARY 37 Missense_Mutation SNP A G rs16835896 uc003ehg.2 KALRN_uc003ehk.... Hybrid_Cap... view
LATS2 p.I902L 13 21553898 21553898 OVISE_OVARY 37 Missense_Mutation SNP T G uc009zzs.2 LATS2_uc001unr.... Hybrid_Cap... view
LATS2 13 21620222 21620223 OVISE_OVARY 37 5'UTR Ins - A rs61240127;rs115723063 uc009zzs.2 LATS2_uc001unr.... Hybrid_Cap...
LMNA p.G412G 1 156106083 156106083 OVISE_OVARY 37 Silent SNP G C uc001fni.2 LMNA_uc001fnf.1... Hybrid_Cap... view
MAML3 p.Q767_splice 4 140651585 140651587 OVISE_OVARY 37 Splice_Site_Del Del CTG - uc003ihz.1 MGST2_uc010ioi.... Hybrid_Cap...
MAP3K1 p.T949del 5 56177849 56177851 OVISE_OVARY 37 In_Frame_Del Del CAA - uc003jqw.3 Hybrid_Cap...
MAP3K14 p.R218_splice 17 43364293 43364294 OVISE_OVARY 37 Splice_Site_Ins Ins - G rs66766023 uc002iiw.1 MAP3K14_uc010da... Hybrid_Cap...
MAP3K4 p.A1199del 6 161519351 161519353 OVISE_OVARY 37 In_Frame_Del Del CTG - uc003qtn.2 MAP3K4_uc010kkc... Hybrid_Cap...
MAP3K5 6 136878752 136878752 OVISE_OVARY 37 3'UTR Del T - rs79903899 uc003qhc.2 MAP3K5_uc011edj... Hybrid_Cap...
MCM3APAS 21 47671275 47671276 OVISE_OVARY 37 3'UTR Ins - AAT rs67797185 uc002zin.2 MCM3APAS_uc002z... Hybrid_Cap...
MYLK p.E1066del 3 123419117 123419119 OVISE_OVARY 37 In_Frame_Del Del TTC - rs72491150 uc003ego.2 MYLK_uc011bjw.1... Hybrid_Cap...
MYST4 p.E1104del 10 76781906 76781908 OVISE_OVARY 37 In_Frame_Del Del GAA - rs79644703 uc001jwn.1 MYST4_uc001jwm.... Hybrid_Cap...
NCAM1 11 112832307 112832308 OVISE_OVARY 37 5'UTR Ins - A rs117108942 uc009yyq.1 NCAM1_uc001pno.... Hybrid_Cap...
NCAM1 11 112832340 112832340 OVISE_OVARY 37 5'UTR Del C - uc009yyq.1 NCAM1_uc001pno.... Hybrid_Cap...
NCOA3 p.Q1276del 20 46279837 46279839 OVISE_OVARY 37 In_Frame_Del Del CAG - rs2664555 uc002xtk.2 NCOA3_uc010ght.... Hybrid_Cap...
NFIA p.P186L 1 61554215 61554215 OVISE_OVARY 37 Missense_Mutation SNP C T uc010oos.1 NFIA_uc001czy.2... Hybrid_Cap... view
NFIA 1 61921185 61921186 OVISE_OVARY 37 3'UTR Ins - T rs57270124;rs76131997 uc010oos.1 NFIA_uc001czy.2... Hybrid_Cap...
NFKBIA 14 35871075 35871076 OVISE_OVARY 37 3'UTR Ins - AA uc001wtf.3 NFKBIA_uc001wte... Hybrid_Cap...
NPM1 5 170837734 170837734 OVISE_OVARY 37 3'UTR Del T - uc011dex.1 NPM1_uc003mbi.2... Hybrid_Cap...
NPR1 1 153665919 153665920 OVISE_OVARY 37 3'UTR Ins - C rs66682713 uc001fcs.3 NPR1_uc010pdz.1... Hybrid_Cap...
NR1H2 p.176_177insQ 19 50881820 50881821 OVISE_OVARY 37 In_Frame_Ins Ins - AAC rs66783852;rs112359270 uc010enw.2 NR1H2_uc002prv.... Hybrid_Cap...
NR3C1 5 142659087 142659087 OVISE_OVARY 37 3'UTR SNP G A uc003lmy.2 NR3C1_uc003lmz.... Hybrid_Cap... view
NUP153 p.G1466C 6 17616798 17616798 OVISE_OVARY 37 Missense_Mutation SNP C A uc011dje.1 NUP153_uc003ncd... Hybrid_Cap... view
NYNRIN p.S1412F 14 24885190 24885190 OVISE_OVARY 37 Missense_Mutation SNP C T uc001wpf.3 Hybrid_Cap... view
OBSCN p.G2702R 1 228468404 228468404 OVISE_OVARY 37 Missense_Mutation SNP G A uc009xez.1 OBSCN_uc001hsn.... Hybrid_Cap... view
PIK3C2A 11 17111198 17111199 OVISE_OVARY 37 3'UTR Del GT - uc001mmq.3 PIK3C2A_uc009yg... Hybrid_Cap...
PRKDC p.L1244fs 8 48805816 48805817 OVISE_OVARY 37 Frame_Shift_Ins Ins - G rs67588121 uc003xqi.2 PRKDC_uc003xqj.... Hybrid_Cap...
PTCH2 p.R673L 1 45293555 45293555 OVISE_OVARY 37 Missense_Mutation SNP C A uc010olf.1 PTCH2_uc010olg.... Hybrid_Cap... view
RECQL4 p.R766fs 8 145738768 145738768 OVISE_OVARY 37 Frame_Shift_Del Del G - uc003zdj.2 Hybrid_Cap...
REL p.T433I 2 61149108 61149108 OVISE_OVARY 37 Missense_Mutation SNP C T uc002sam.1 REL_uc002san.1_... Hybrid_Cap... view
ROBO2 p.N344T 3 77595573 77595573 OVISE_OVARY 37 Missense_Mutation SNP A C uc003dpz.2 ROBO2_uc003dpy.... Hybrid_Cap... view
ROBO2 3 77666937 77666937 OVISE_OVARY 37 Intron Del A - rs78745603 uc003dpz.2 ROBO2_uc003dpy.... Hybrid_Cap...
ROR1 p.M64V 1 64515389 64515389 OVISE_OVARY 37 Missense_Mutation SNP A G rs117735363 uc001dbj.2 ROR1_uc001dbi.3... Hybrid_Cap... view
RPS6KA5 p.Q466H 14 91365748 91365748 OVISE_OVARY 37 Missense_Mutation SNP T G uc001xys.2 RPS6KA5_uc010tw... Hybrid_Cap... view
SETDB1 p.G1188R 1 150936110 150936110 OVISE_OVARY 37 Missense_Mutation SNP G A uc001evu.2 SETDB1_uc001evv... Hybrid_Cap... view
SS18L1 p.S159fs 20 60737906 60737906 OVISE_OVARY 37 Frame_Shift_Del Del T - uc011aaa.1 SS18L1_uc002ybz... Hybrid_Cap...
STAT3 p.V375I 17 40481781 40481781 OVISE_OVARY 37 Missense_Mutation SNP C T uc002hzl.1 STAT3_uc002hzk.... Hybrid_Cap... view
TEC 4 48139307 48139310 OVISE_OVARY 37 3'UTR Del TTAT - rs79098351 uc003gxz.2 Hybrid_Cap...
TFPT p.R193Q 19 54611397 54611397 OVISE_OVARY 37 Missense_Mutation SNP C T uc010yej.1 Hybrid_Cap... view
TGFB2 1 218519928 218519929 OVISE_OVARY 37 5'UTR Ins - AAAC uc001hln.2 TGFB2_uc001hll.... Hybrid_Cap...
TLX3 p.A236T 5 170738433 170738433 OVISE_OVARY 37 Missense_Mutation SNP G A uc003mbf.2 Hybrid_Cap... view
TMEM123 11 102269398 102269398 OVISE_OVARY 37 3'UTR Del G - uc001pha.2 TMEM123_uc009yx... Hybrid_Cap...
TP63 3 189507518 189507519 OVISE_OVARY 37 Intron Ins - AGAG rs62702062;rs79714037 uc003fry.2 TP63_uc003frx.2... Hybrid_Cap...
TRIM33 1 114940211 114940212 OVISE_OVARY 37 3'UTR Ins - T rs66490349 uc001eew.2 TRIM33_uc010owr... Hybrid_Cap...
TRPS1 8 116635872 116635873 OVISE_OVARY 37 5'UTR Ins - A rs76893349 uc003yny.2 TRPS1_uc011lhy.... Hybrid_Cap...
TTN 2 179391639 179391640 OVISE_OVARY 37 3'UTR Ins - T rs36037175 uc010zfg.1 TTN_uc010zfh.1_... Hybrid_Cap...
VEGFC p.S419_splice 4 177605082 177605084 OVISE_OVARY 37 Splice_Site_Del Del TCA - uc003ius.1 Hybrid_Cap...