Annotation Summary for Cell Line: OVKATE  

Cell line primary name: OVKATE
Cell line aliases:
Gender: F
Site Primary: ovary
Histology: carcinoma
Hist Subtype1: adenocarcinoma
Notes:
Source: HSRRB
Expression arrays: NIECE_p_NCLE_RNA3_HG-U133_Plus_2_F05_296118
SNP arrays: FASTS_p_NCLE_DNAAffy4_S_GenomeWideSNP_6_G04_335338
Oncomap: yes
Hybrid Capture Sequencing: yes


Mutations in OVKATE

GeneProtein
Change
ChrStartEnd SampleNCBI
Build
Variant
Classification
Variant TypeReference
Allele
Tumor
Allele 1
dbSNP IDAnnotation
Transcript
Other
Transcripts
Method View
Reads
Mutation
Assessor
AAK1 p.541_542QQ>Q 2 69741754 69741756 OVKATE_OVARY 37 In_Frame_Del Del TGT - rs55712143 uc002sfp.2 AAK1_uc010fdk.2... Hybrid_Cap...
ADAM28 8 24211994 24211997 OVKATE_OVARY 37 3'UTR Del CTAT - rs10610134 uc003xdy.2 ADAM28_uc011laa... Hybrid_Cap...
ADK 10 76468259 76468259 OVKATE_OVARY 37 3'UTR SNP G A uc001jwi.2 ADK_uc010qlb.1_... Hybrid_Cap... view
AKAP12 p.1531_1532insE 6 151674116 151674117 OVKATE_OVARY 37 In_Frame_Ins Ins - GAG rs34737819 uc011eep.1 AKAP12_uc003qoe... Hybrid_Cap...
ALS2 2 202587706 202587707 OVKATE_OVARY 37 Intron Ins - A rs3219165 uc002uyo.2 ALS2_uc002uyp.3... Hybrid_Cap...
ATM p.T935R 11 108139302 108139302 OVKATE_OVARY 37 Missense_Mutation SNP C G rs3218708 uc001pkb.1 ATM_uc009yxr.1_... Hybrid_Cap... view
ATP13A5 p.M797I 3 193029659 193029659 OVKATE_OVARY 37 Missense_Mutation SNP C A uc011bsq.1 Hybrid_Cap... view
ATR p.S2449L 3 142178072 142178072 OVKATE_OVARY 37 Missense_Mutation SNP G A uc003eux.3 ATR_uc003euy.1_... Hybrid_Cap... view
AURKC 19 57742494 57742507 OVKATE_OVARY 37 5'UTR Del GGACG... - rs67926438;rs112039303;rs59094959 uc002qoe.2 AURKC_uc002qoc.... Hybrid_Cap...
BMP4 14 54416602 54416602 OVKATE_OVARY 37 3'UTR Del T - rs76335800 uc001xal.3 BMP4_uc010aoh.2... Hybrid_Cap...
BTG1 12 92537706 92537707 OVKATE_OVARY 37 3'UTR Ins - T rs33983967 uc001tby.3 BTG1_uc001tbv.1... Hybrid_Cap...
BUB1B p.H681P 15 40500870 40500870 OVKATE_OVARY 37 Missense_Mutation SNP A C uc001zkx.3 Hybrid_Cap... view
CACNB2 10 18828721 18828722 OVKATE_OVARY 37 3'UTR Ins - AA rs3841459 uc001ipr.2 CACNB2_uc009xjz... Hybrid_Cap...
CDC73 1 193219882 193219882 OVKATE_OVARY 37 3'UTR SNP C G uc001gtb.2 Hybrid_Cap... view
CHD8 p.G1178_splice 14 21868773 21868773 OVKATE_OVARY 37 Splice_Site_SNP SNP T A uc001was.1 CHD8_uc001war.1... Hybrid_Cap... view
CHRNA5 p.I200V 15 78882331 78882331 OVKATE_OVARY 37 Missense_Mutation SNP A G uc002bdy.2 CHRNA5_uc002bdz... Hybrid_Cap... view
CLTCL1 p.V1201_splice 22 19189003 19189004 OVKATE_OVARY 37 Splice_Site_Ins Ins - C rs11386977 uc002zpb.2 CLTCL1_uc011agv... Hybrid_Cap...
CREB3L2 p.T100del 7 137612914 137612916 OVKATE_OVARY 37 In_Frame_Del Del TGG - uc003vtw.2 CREB3L2_uc003vt... Hybrid_Cap...
CSNK1A1L 13 37678208 37678208 OVKATE_OVARY 37 3'UTR SNP C T uc001uwm.1 Hybrid_Cap... view
CTBP2 p.K974fs 10 126678123 126678123 OVKATE_OVARY 37 Frame_Shift_Del Del T - uc001lie.3 CTBP2_uc009yak.... Hybrid_Cap...
DGKB 7 14216345 14216346 OVKATE_OVARY 37 Intron Ins - AGACT uc003ssz.2 DGKB_uc011jxt.1... Hybrid_Cap...
DYRK1A 21 38884966 38884967 OVKATE_OVARY 37 3'UTR Ins - T rs72430212 uc002ywk.2 DYRK1A_uc002ywi... Hybrid_Cap...
EPHA2 p.R566H 1 16460396 16460396 OVKATE_OVARY 37 Missense_Mutation SNP C T uc001aya.1 Hybrid_Cap... view
EPHA6 3 97367230 97367231 OVKATE_OVARY 37 Intron Ins - A rs115253553 uc010how.1 EPHA6_uc003drs.... Hybrid_Cap...
ERCC3 p.K11R 2 128051291 128051291 OVKATE_OVARY 37 Missense_Mutation SNP T C uc002toh.1 ERCC3_uc002toe.... Hybrid_Cap... view
ETV1 7 14028708 14028708 OVKATE_OVARY 37 5'UTR Del A - rs77190713 uc011jxq.1 ETV1_uc011jxn.1... Hybrid_Cap...
FAM132A 1 1177919 1177919 OVKATE_OVARY 37 3'UTR Del T - uc001adl.1 Hybrid_Cap...
FANCD2 3 10143086 10143087 OVKATE_OVARY 37 3'UTR Ins - A uc003bux.1 FANCD2_uc003buy... Hybrid_Cap...
FASLG 1 172628206 172628206 OVKATE_OVARY 37 5'UTR SNP G A rs55804267 uc001gis.2 FASLG_uc001git.... Hybrid_Cap... view
FASN p.A1060G 17 80045245 80045245 OVKATE_OVARY 37 Missense_Mutation SNP G C uc002kdu.2 FASN_uc002kdw.1... Hybrid_Cap... view
FGFR1OP 6 167453519 167453520 OVKATE_OVARY 37 3'UTR Ins - T rs115519488 uc003qvj.2 CCR6_uc003qvl.2... Hybrid_Cap...
FGFR3 4 1809128 1809129 OVKATE_OVARY 37 3'UTR Del GT - uc003gdu.2 FGFR3_uc003gdr.... Hybrid_Cap...
FH p.H204Y 1 241672031 241672031 OVKATE_OVARY 37 Missense_Mutation SNP G A uc001hyx.2 Hybrid_Cap... view
FLI1 11 128638217 128638217 OVKATE_OVARY 37 Intron Del G - uc010sbu.1 FLI1_uc010sbt.1... Hybrid_Cap...
FLT4 5 180035183 180035185 OVKATE_OVARY 37 Intron Del AGT - uc003mlz.3 FLT4_uc003mma.3... Hybrid_Cap...
FMN2 p.G59del 1 240255569 240255571 OVKATE_OVARY 37 In_Frame_Del Del GGC - uc010pye.1 FMN2_uc010pyd.1... Hybrid_Cap...
FMN2 p.PPLPGAGIPPP939del 1 240370914 240370946 OVKATE_OVARY 37 In_Frame_Del Del GCCCC... - rs4997328;rs4997329 uc010pye.1 FMN2_uc010pyd.1... Hybrid_Cap...
FN1 2 216244182 216244185 OVKATE_OVARY 37 Intron Del GTAC - uc002vfa.2 FN1_uc002vfb.2_... Hybrid_Cap...
GRAMD1B 11 123493342 123493342 OVKATE_OVARY 37 3'UTR SNP T C uc001pyw.2 GRAMD1B_uc001py... Hybrid_Cap... view
GRIA3 X 122318386 122318387 OVKATE_OVARY 37 Splice_Site_Ins Ins - G rs66632982 uc004etq.3 GRIA3_uc004etr.... Hybrid_Cap...
GUCY2C 12 14827464 14827466 OVKATE_OVARY 37 Intron Del ATC - rs72525754;rs3083879 uc001rcd.2 GUCY2C_uc009zhz... Hybrid_Cap...
HNF1A 12 121434630 121434631 OVKATE_OVARY 37 Intron Ins - TCATTCAT rs75100977 uc010szn.1 HNF1A_uc001tze.... Hybrid_Cap...
HSP90B1 p.E791del 12 104341188 104341190 OVKATE_OVARY 37 In_Frame_Del Del GAA - rs117491163 uc001tkb.1 HSP90B1_uc010sw... Hybrid_Cap...
IL1RN p.D115E 2 113890250 113890250 OVKATE_OVARY 37 Missense_Mutation SNP C A uc002tiz.2 IL1RN_uc002tix.... Hybrid_Cap... view
ILK 11 6630029 6630029 OVKATE_OVARY 37 Intron Del C - uc001mee.2 ILK_uc001mef.2_... Hybrid_Cap...
ISG15 1 948846 948847 OVKATE_OVARY 37 5'UTR Ins - A rs33916361 uc001acj.3 Hybrid_Cap...
ITPR2 p.R470_splice 12 26834804 26834805 OVKATE_OVARY 37 Splice_Site_Ins Ins - ACTC rs66696203;rs59199365 uc001rhg.2 Hybrid_Cap...
KLK7 19 51480672 51480675 OVKATE_OVARY 37 3'UTR Del GGTT - uc002puo.2 KLK7_uc002pup.2... Hybrid_Cap...
MAF 16 79628537 79628537 OVKATE_OVARY 37 Intron Del T - uc002ffm.2 MAF_uc002ffn.2_... Hybrid_Cap...
MAML3 p.Q767_splice 4 140651585 140651587 OVKATE_OVARY 37 Splice_Site_Del Del CTG - uc003ihz.1 MGST2_uc010ioi.... Hybrid_Cap...
MAP3K14 p.R218_splice 17 43364293 43364294 OVKATE_OVARY 37 Splice_Site_Ins Ins - G rs66766023 uc002iiw.1 MAP3K14_uc010da... Hybrid_Cap...
MAPKAPK3 3 50685575 50685575 OVKATE_OVARY 37 3'UTR Del A - rs76026164 uc003day.1 MAPKAPK3_uc003d... Hybrid_Cap...
MINK1 p.D988N 17 4798414 4798414 OVKATE_OVARY 37 Missense_Mutation SNP G A uc010vsl.1 MINK1_uc010vsk.... Hybrid_Cap... view
MYLK 3 123332876 123332876 OVKATE_OVARY 37 3'UTR Del T - rs115544676 uc003ego.2 MYLK_uc003egl.2... Hybrid_Cap...
MYLK p.E1066del 3 123419117 123419119 OVKATE_OVARY 37 In_Frame_Del Del TTC - rs72491150 uc003ego.2 MYLK_uc011bjw.1... Hybrid_Cap...
MYST4 p.E1104del 10 76781906 76781908 OVKATE_OVARY 37 In_Frame_Del Del GAA - rs79644703 uc001jwn.1 MYST4_uc001jwm.... Hybrid_Cap...
NAV3 p.R1250_splice 12 78515718 78515718 OVKATE_OVARY 37 Splice_Site_SNP SNP A T uc001syp.2 NAV3_uc001syo.2... Hybrid_Cap... view
NCAM1 11 112832307 112832308 OVKATE_OVARY 37 5'UTR Ins - A rs117108942 uc009yyq.1 NCAM1_uc001pno.... Hybrid_Cap...
NCAM1 11 112832340 112832340 OVKATE_OVARY 37 5'UTR Del C - uc009yyq.1 NCAM1_uc001pno.... Hybrid_Cap...
NCOA2 8 71129001 71129001 OVKATE_OVARY 37 Splice_Site_SNP SNP T A uc003xyn.1 Hybrid_Cap... view
NOTCH4 p.12_16LLLLL>L 6 32191659 32191670 OVKATE_OVARY 37 In_Frame_Del Del AGCAG... - uc003obb.2 NOTCH4_uc011dpu... Hybrid_Cap...
NPR1 1 153665919 153665920 OVKATE_OVARY 37 3'UTR Ins - C rs66682713 uc001fcs.3 NPR1_uc010pdz.1... Hybrid_Cap...
NR1H2 p.176_177insQ 19 50881820 50881821 OVKATE_OVARY 37 In_Frame_Ins Ins - AAC rs66783852;rs112359270 uc010enw.2 NR1H2_uc002prv.... Hybrid_Cap...
NUP214 9 134067556 134067557 OVKATE_OVARY 37 Intron Ins - T rs66652901 uc004cag.2 NUP214_uc004cah... Hybrid_Cap...
P2RX7 p.P582S 12 121622561 121622561 OVKATE_OVARY 37 Missense_Mutation SNP C T uc001tzm.2 P2RX7_uc001tzn.... Hybrid_Cap... view
PAX3 2 223066017 223066018 OVKATE_OVARY 37 Intron Ins - C rs115619343 uc002vmt.1 PAX3_uc002vmy.1... Hybrid_Cap...
PCM1 p.A262T 8 17804695 17804695 OVKATE_OVARY 37 Missense_Mutation SNP G A uc003wyi.3 PCM1_uc011kyh.1... Hybrid_Cap... view
PDGFRA 4 55131002 55131002 OVKATE_OVARY 37 Intron Del A - uc003han.3 PDGFRA_uc003haa... Hybrid_Cap...
PDK4 7 95221928 95221928 OVKATE_OVARY 37 Intron Del A - uc003uoa.2 PDK4_uc003unz.2... Hybrid_Cap...
PGR 11 100933598 100933599 OVKATE_OVARY 37 Intron Ins - AATGA rs35148438 uc001pgh.2 PGR_uc001pgg.2_... Hybrid_Cap...
PI4KB p.G769S 1 151266494 151266494 OVKATE_OVARY 37 Missense_Mutation SNP C T uc001exr.2 PI4KB_uc001exs.... Hybrid_Cap... view
PIK3C2A 11 17111198 17111199 OVKATE_OVARY 37 3'UTR Del GT - uc001mmq.3 PIK3C2A_uc009yg... Hybrid_Cap...
PLCB2 15 40580832 40580832 OVKATE_OVARY 37 3'UTR SNP G A uc001zld.2 PLCB2_uc001zlc.... Hybrid_Cap... view
PMS1 2 190670539 190670540 OVKATE_OVARY 37 Intron Ins - A rs3214425 uc002urh.3 PMS1_uc010zga.1... Hybrid_Cap...
PPM1E p.43_44insEP 17 56833457 56833458 OVKATE_OVARY 37 In_Frame_Ins Ins - GAACCC rs74256772 uc002iwx.2 PPM1E_uc010ddd.... Hybrid_Cap...
PRCC p.L229F 1 156756568 156756568 OVKATE_OVARY 37 Missense_Mutation SNP C T uc001fqa.2 PRCC_uc001fqb.2... Hybrid_Cap... view
PRKDC p.L1244fs 8 48805816 48805817 OVKATE_OVARY 37 Frame_Shift_Ins Ins - G rs67588121 uc003xqi.2 PRKDC_uc003xqj.... Hybrid_Cap...
PRPF4B p.P744L 6 4052247 4052247 OVKATE_OVARY 37 Missense_Mutation SNP C T uc003mvv.2 PRPF4B_uc003mvw... Hybrid_Cap... view
RECQL4 p.R766fs 8 145738768 145738768 OVKATE_OVARY 37 Frame_Shift_Del Del G - uc003zdj.2 Hybrid_Cap...
RPN1 3 128339072 128339072 OVKATE_OVARY 37 3'UTR Del G - uc003ekr.1 RPN1_uc011bkq.1... Hybrid_Cap...
RPS6KA5 14 91360733 91360734 OVKATE_OVARY 37 Intron Ins - T rs77438853 uc001xys.2 RPS6KA5_uc010tw... Hybrid_Cap...
SCYL1 p.I124I 11 65293511 65293511 OVKATE_OVARY 37 Silent SNP C T uc001oea.1 SCYL1_uc009yqk.... Hybrid_Cap... view
SIX4 p.S546R 14 61180833 61180833 OVKATE_OVARY 37 Missense_Mutation SNP G C uc001xfc.2 Hybrid_Cap... view
SMAD4 p.L146* 18 48575677 48575677 OVKATE_OVARY 37 Nonsense_Mutation SNP T G uc010xdp.1 SMAD4_uc010xdo.... Hybrid_Cap... view
SMG1 p.R75T 16 18908147 18908147 OVKATE_OVARY 37 Missense_Mutation SNP C G uc002dfm.2 SMG1_uc010bwb.2... Hybrid_Cap... view
STK16 2 220113404 220113404 OVKATE_OVARY 37 3'UTR SNP A G uc002vkq.2 STK16_uc002vko.... Hybrid_Cap... view
STK31 7 23872024 23872025 OVKATE_OVARY 37 3'UTR Ins - TTTG rs66787534 uc003sws.3 STK31_uc003swt.... Hybrid_Cap...
TACC3 4 1739519 1739527 OVKATE_OVARY 37 Intron Del GCCAT... - rs114226356 uc003gdo.2 TACC3_uc010ibz.... Hybrid_Cap...
TG p.D2390N 8 134042197 134042197 OVKATE_OVARY 37 Missense_Mutation SNP G A uc003ytw.2 TG_uc010mdw.2_M... Hybrid_Cap... view
TGFB2 1 218519928 218519929 OVKATE_OVARY 37 5'UTR Ins - AAAC uc001hln.2 TGFB2_uc001hll.... Hybrid_Cap...
TLK1 2 171850178 171850179 OVKATE_OVARY 37 3'UTR Ins - AA rs71008739 uc002ugo.2 TLK1_uc002ugn.2... Hybrid_Cap...
TP53 p.R282W 17 7577094 7577094 OVKATE_OVARY 37 Missense_Mutation SNP G A rs28934574 uc002gim.2 TP53_uc002gig.1... Hybrid_Cap... view
TP63 3 189507518 189507519 OVKATE_OVARY 37 Intron Ins - AGAG rs62702062;rs79714037 uc003fry.2 TP63_uc003frx.2... Hybrid_Cap...
TRIM33 1 114940211 114940212 OVKATE_OVARY 37 3'UTR Ins - T rs66490349 uc001eew.2 TRIM33_uc010owr... Hybrid_Cap...
TRPS1 8 116635872 116635873 OVKATE_OVARY 37 5'UTR Ins - A rs76893349 uc003yny.2 TRPS1_uc011lhy.... Hybrid_Cap...
TSC2 p.A1164P 16 2130258 2130258 OVKATE_OVARY 37 Missense_Mutation SNP G C uc002con.2 TSC2_uc010bsd.2... Hybrid_Cap... view
TTN 2 179391639 179391640 OVKATE_OVARY 37 3'UTR Ins - T rs36037175 uc010zfg.1 TTN_uc010zfh.1_... Hybrid_Cap...
TTN p.A4374V 2 179596843 179596843 OVKATE_OVARY 37 Missense_Mutation SNP G A uc010zfg.1 TTN_uc010zfh.1_... Hybrid_Cap... view
UBR5 p.N2319S 8 103284774 103284774 OVKATE_OVARY 37 Missense_Mutation SNP T C uc003ykr.1 UBR5_uc003yks.1... Hybrid_Cap... view
VEGFC p.S419_splice 4 177605082 177605084 OVKATE_OVARY 37 Splice_Site_Del Del TCA - uc003ius.1 Hybrid_Cap...
VRK3 p.SCSPQKT127del 19 50510972 50510992 OVKATE_OVARY 37 In_Frame_Del Del CTGGT... - rs117711287;rs117077533 uc002prg.2 VRK3_uc002prh.1... Hybrid_Cap...