Annotation Summary for Cell Line: OVTOKO  

Cell line primary name: OVTOKO
Cell line aliases:
Gender: F
Site Primary: ovary
Histology: carcinoma
Hist Subtype1: clear_cell_carcinoma
Notes:
Source: HSRRB
Expression arrays: BRAKE_p_NCLE_RNA2_HG-U133_Plus_2_A09_241058
SNP arrays: LIMPS_p_NCLE_DNA2N_GenomeWideSNP_6_C12_246680
Oncomap: yes
Hybrid Capture Sequencing: yes


Mutations in OVTOKO

GeneProtein
Change
ChrStartEnd SampleNCBI
Build
Variant
Classification
Variant TypeReference
Allele
Tumor
Allele 1
dbSNP IDAnnotation
Transcript
Other
Transcripts
Method View
Reads
Mutation
Assessor
AAK1 p.541_542QQ>Q 2 69741754 69741756 OVTOKO_OVARY 37 In_Frame_Del Del TGT - rs55712143 uc002sfp.2 AAK1_uc010fdk.2... Hybrid_Cap...
ADAM28 8 24211994 24211997 OVTOKO_OVARY 37 3'UTR Del CTAT - rs10610134 uc003xdy.2 ADAM28_uc011laa... Hybrid_Cap...
ADCK1 p.S485N 14 78399616 78399616 OVTOKO_OVARY 37 Missense_Mutation SNP G A uc001xui.2 ADCK1_uc001xuj.... Hybrid_Cap... view
ADRBK2 p.G687S 22 26118409 26118409 OVTOKO_OVARY 37 Missense_Mutation SNP G A uc003abx.3 ADRBK2_uc003aby... Hybrid_Cap... view
AKAP12 p.1531_1532insE 6 151674116 151674117 OVTOKO_OVARY 37 In_Frame_Ins Ins - GAG rs34737819 uc011eep.1 AKAP12_uc003qoe... Hybrid_Cap...
AKAP9 p.1335_1336insQ 7 91652178 91652179 OVTOKO_OVARY 37 In_Frame_Ins Ins - AAC rs34756483 uc003ulg.2 AKAP9_uc003ule.... Hybrid_Cap...
ALK p.G129V 2 30143140 30143140 OVTOKO_OVARY 37 Missense_Mutation SNP C A uc002rmy.2 Hybrid_Cap... view
ALS2 2 202587706 202587707 OVTOKO_OVARY 37 Intron Ins - A rs3219165 uc002uyo.2 ALS2_uc002uyp.3... Hybrid_Cap...
ARHGEF10 p.P812L 8 1871987 1871987 OVTOKO_OVARY 37 Missense_Mutation SNP C T uc003wpr.2 ARHGEF10_uc003w... Hybrid_Cap... view
ATRX X 76763816 76763816 OVTOKO_OVARY 37 3'UTR SNP T C uc004ecp.3 ATRX_uc004ecq.3... Hybrid_Cap... view
BCL11B p.T840M 14 99640654 99640654 OVTOKO_OVARY 37 Missense_Mutation SNP G A uc001yga.2 BCL11B_uc001ygb... Hybrid_Cap... view
CACNB2 10 18828721 18828722 OVTOKO_OVARY 37 3'UTR Ins - AA rs3841459 uc001ipr.2 CACNB2_uc009xjz... Hybrid_Cap...
CAD p.E1659del 2 27461412 27461414 OVTOKO_OVARY 37 In_Frame_Del Del GGA - uc002rji.2 CAD_uc010eyw.2_... Hybrid_Cap...
CCNA2 p.V72_splice 4 122743803 122743804 OVTOKO_OVARY 37 Splice_Site_Ins Ins - A uc003iec.3 Hybrid_Cap...
CDC42BPA p.P675P 1 227288917 227288917 OVTOKO_OVARY 37 Silent SNP T C uc001hqr.2 CDC42BPA_uc001h... Hybrid_Cap... view
CDKL3 5 133643736 133643736 OVTOKO_OVARY 37 Intron SNP C G uc003kzf.3 CDKL3_uc011cxm.... Hybrid_Cap... view
CDKL3 p.E389Q 5 133644028 133644028 OVTOKO_OVARY 37 Missense_Mutation SNP C G uc003kzf.3 CDKL3_uc011cxm.... Hybrid_Cap... view
CDKL3 p.E350Q 5 133644145 133644145 OVTOKO_OVARY 37 Missense_Mutation SNP C G uc003kzf.3 CDKL3_uc011cxm.... Hybrid_Cap... view
CHD1 p.L1358V 5 98205493 98205493 OVTOKO_OVARY 37 Missense_Mutation SNP G C uc003knf.2 CHD1_uc010jbn.2... Hybrid_Cap... view
CLTCL1 p.V1201_splice 22 19189003 19189004 OVTOKO_OVARY 37 Splice_Site_Ins Ins - C rs11386977 uc002zpb.2 CLTCL1_uc011agv... Hybrid_Cap...
CREBBP 16 3929924 3929924 OVTOKO_OVARY 37 5'UTR SNP C T uc002cvv.2 CREBBP_uc002cvw... Hybrid_Cap... view
CTBP2 p.K974fs 10 126678123 126678123 OVTOKO_OVARY 37 Frame_Shift_Del Del T - uc001lie.3 CTBP2_uc009yak.... Hybrid_Cap...
CXCL12 10 44873992 44873993 OVTOKO_OVARY 37 Intron Ins - CT rs117617571 uc001jbh.2 CXCL12_uc001jbf... Hybrid_Cap...
CXCR7 2 237490383 237490383 OVTOKO_OVARY 37 3'UTR SNP G A uc010fyq.2 CXCR7_uc002vwd.... Hybrid_Cap... view
DCLK1 p.R60C 13 36700097 36700097 OVTOKO_OVARY 37 Missense_Mutation SNP G A uc001uvf.2 Hybrid_Cap... view
DLL1 p.N630fs 6 170592478 170592478 OVTOKO_OVARY 37 Frame_Shift_Del Del T - uc003qxm.2 Hybrid_Cap...
DYRK1A 21 38884966 38884967 OVTOKO_OVARY 37 3'UTR Ins - T rs72430212 uc002ywk.2 DYRK1A_uc002ywi... Hybrid_Cap...
EDN1 6 12290729 12290729 OVTOKO_OVARY 37 5'UTR Del A - uc003nae.3 EDN1_uc010jpb.2... Hybrid_Cap...
EGF p.L1185F 4 110932540 110932540 OVTOKO_OVARY 37 Missense_Mutation SNP C T uc003hzy.3 EGF_uc011cfu.1_... Hybrid_Cap... view
EPHA6 3 97367230 97367231 OVTOKO_OVARY 37 Intron Ins - A rs115253553 uc010how.1 EPHA6_uc003drs.... Hybrid_Cap...
ERG 21 39764277 39764277 OVTOKO_OVARY 37 Intron SNP T A uc010gnw.2 ERG_uc002yxa.2_... Hybrid_Cap... view
FANCA 16 89806391 89806391 OVTOKO_OVARY 37 Intron SNP G A uc002fou.1 ZNF276_uc010ciq... Hybrid_Cap... view
FER p.C372G 5 108233427 108233427 OVTOKO_OVARY 37 Missense_Mutation SNP T G uc003kop.1 FER_uc011cvf.1_... Hybrid_Cap... view
FGFR1OP 6 167453519 167453520 OVTOKO_OVARY 37 3'UTR Ins - T rs115519488 uc003qvj.2 CCR6_uc003qvl.2... Hybrid_Cap...
FGFR3 4 1809128 1809129 OVTOKO_OVARY 37 3'UTR Del GT - uc003gdu.2 FGFR3_uc003gdr.... Hybrid_Cap...
FGFR4 p.D127H 5 176517769 176517769 OVTOKO_OVARY 37 Missense_Mutation SNP G C uc003mfl.2 FGFR4_uc003mfm.... Hybrid_Cap... view
FLI1 11 128638217 128638217 OVTOKO_OVARY 37 Intron Del G - uc010sbu.1 FLI1_uc010sbt.1... Hybrid_Cap...
FLNA X 153577130 153577131 OVTOKO_OVARY 37 3'UTR Ins - CC uc004fkk.2 FLNA_uc004fki.2... Hybrid_Cap...
FLNA X 153577132 153577133 OVTOKO_OVARY 37 3'UTR Ins - CA rs10692455;rs71733538 uc004fkk.2 FLNA_uc004fki.2... Hybrid_Cap...
FN1 p.G595R 2 216284001 216284001 OVTOKO_OVARY 37 Missense_Mutation SNP C T uc002vfa.2 FN1_uc002vfb.2_... Hybrid_Cap... view
GPR112 p.D2657del X 135474445 135474447 OVTOKO_OVARY 37 In_Frame_Del Del GAT - rs3030295 uc004ezu.1 GPR112_uc010nsb... Hybrid_Cap...
GRIA3 X 122318386 122318387 OVTOKO_OVARY 37 Splice_Site_Ins Ins - G rs66632982 uc004etq.3 GRIA3_uc004etr.... Hybrid_Cap...
GRIK1 21 30909456 30909456 OVTOKO_OVARY 37 3'UTR SNP G A uc011acs.1 GRIK1_uc002ynn.... Hybrid_Cap... view
GRK7 p.V398F 3 141526628 141526628 OVTOKO_OVARY 37 Missense_Mutation SNP G T uc011bnd.1 Hybrid_Cap... view
HIF1A p.I276V 14 62199185 62199185 OVTOKO_OVARY 37 Missense_Mutation SNP A G uc001xfs.2 HIF1A_uc001xfq.... Hybrid_Cap... view
HIF1A 14 62213929 62213930 OVTOKO_OVARY 37 3'UTR Ins - T rs67890419 uc001xfs.2 HIF1A_uc001xfq.... Hybrid_Cap...
HSP90B1 p.E791del 12 104341188 104341190 OVTOKO_OVARY 37 In_Frame_Del Del GAA - rs117491163 uc001tkb.1 HSP90B1_uc010sw... Hybrid_Cap...
ILK 11 6630029 6630029 OVTOKO_OVARY 37 Intron Del C - uc001mee.2 ILK_uc001mef.2_... Hybrid_Cap...
ITPR2 p.R470_splice 12 26834804 26834805 OVTOKO_OVARY 37 Splice_Site_Ins Ins - ACTC rs66696203;rs59199365 uc001rhg.2 Hybrid_Cap...
JUN 1 59247577 59247577 OVTOKO_OVARY 37 3'UTR SNP C G uc001cze.2 Hybrid_Cap... view
LATS2 13 21620222 21620223 OVTOKO_OVARY 37 5'UTR Ins - A rs61240127;rs115723063 uc009zzs.2 LATS2_uc001unr.... Hybrid_Cap...
MAML3 p.Q767_splice 4 140651585 140651587 OVTOKO_OVARY 37 Splice_Site_Del Del CTG - uc003ihz.1 MGST2_uc010ioi.... Hybrid_Cap...
MAP3K14 p.R218_splice 17 43364293 43364294 OVTOKO_OVARY 37 Splice_Site_Ins Ins - G rs66766023 uc002iiw.1 MAP3K14_uc010da... Hybrid_Cap...
MAPK14 6 36076345 36076354 OVTOKO_OVARY 37 3'UTR Del GTGTG... - rs80147786 uc003olp.2 MAPK14_uc003olq... Hybrid_Cap...
MAPKBP1 15 42111753 42111754 OVTOKO_OVARY 37 Intron Ins - C rs3034891 uc001zok.3 MAPKBP1_uc001zo... Hybrid_Cap...
MAST4 p.Y1054C 5 66456363 66456363 OVTOKO_OVARY 37 Missense_Mutation SNP A G uc003jut.1 MAST4_uc003juw.... Hybrid_Cap... view
MKL1 p.A412V 22 40815207 40815207 OVTOKO_OVARY 37 Missense_Mutation SNP G A uc003ayv.1 MKL1_uc003ayw.1... Hybrid_Cap... view
MLL3 p.Y816fs 7 151945071 151945072 OVTOKO_OVARY 37 Frame_Shift_Ins Ins - T uc003wla.2 Hybrid_Cap...
MYLK p.E1066del 3 123419117 123419119 OVTOKO_OVARY 37 In_Frame_Del Del TTC - rs72491150 uc003ego.2 MYLK_uc011bjw.1... Hybrid_Cap...
NCAM1 11 112832307 112832308 OVTOKO_OVARY 37 5'UTR Ins - A rs117108942 uc009yyq.1 NCAM1_uc001pno.... Hybrid_Cap...
NEK3 p.K313_splice 13 52718050 52718051 OVTOKO_OVARY 37 Splice_Site_Ins Ins - T rs72514762 uc001vgh.2 NEK3_uc001vgg.2... Hybrid_Cap...
NFIA 1 61921185 61921186 OVTOKO_OVARY 37 3'UTR Ins - T rs57270124;rs76131997 uc010oos.1 NFIA_uc001czy.2... Hybrid_Cap...
NFKB1 p.D917_splice 4 103534740 103534741 OVTOKO_OVARY 37 Splice_Site_Ins Ins - A rs35795162 uc011cep.1 NFKB1_uc011ceq.... Hybrid_Cap...
NGFR p.D399G 17 47590283 47590283 OVTOKO_OVARY 37 Missense_Mutation SNP A G uc002ioz.3 Hybrid_Cap... view
NPRL2 3 50384978 50384978 OVTOKO_OVARY 37 3'UTR Del C - rs75013672 uc003daj.1 ZMYND10_uc003da... Hybrid_Cap...
NR1H2 p.176_177insQ 19 50881820 50881821 OVTOKO_OVARY 37 In_Frame_Ins Ins - AAC rs66783852;rs112359270 uc010enw.2 NR1H2_uc002prv.... Hybrid_Cap...
PAX3 2 223066017 223066018 OVTOKO_OVARY 37 Intron Ins - C rs115619343 uc002vmt.1 PAX3_uc002vmy.1... Hybrid_Cap...
PAX8 p.H377Y 2 113984792 113984792 OVTOKO_OVARY 37 Missense_Mutation SNP G A uc010yxt.1 PAX8_uc010yxu.1... Hybrid_Cap... view
PAXIP1 7 154759336 154759336 OVTOKO_OVARY 37 Intron SNP A T uc003wlp.2 PAXIP1_uc003wlq... Hybrid_Cap... view
PDE4DIP 1 144863560 144863560 OVTOKO_OVARY 37 Intron SNP A C uc001elw.3 NBPF10_uc009wir... Hybrid_Cap... view
PDE4DIP 1 144863620 144863620 OVTOKO_OVARY 37 Intron SNP A G uc001elw.3 NBPF10_uc009wir... Hybrid_Cap... view
PDE4DIP p.L601fs 1 144915624 144915624 OVTOKO_OVARY 37 Frame_Shift_Del Del G - rs1778112 uc001elw.3 NBPF10_uc009wir... Hybrid_Cap...
PDE4DIP p.E243fs 1 144923729 144923729 OVTOKO_OVARY 37 Frame_Shift_Del Del T - uc001elw.3 NBPF10_uc009wir... Hybrid_Cap...
PDGFRA 4 55131002 55131002 OVTOKO_OVARY 37 Intron Del A - uc003han.3 PDGFRA_uc003haa... Hybrid_Cap...
PIK3C2B p.P1476S 1 204397321 204397321 OVTOKO_OVARY 37 Missense_Mutation SNP G A rs114999811 uc001haw.2 PIK3C2B_uc010pq... Hybrid_Cap... view
PIK3C2G 12 18800990 18800990 OVTOKO_OVARY 37 3'UTR Del A - rs16914368 uc010sib.1 PIK3C2G_uc001rd... Hybrid_Cap...
PRDM16 1 3350396 3350396 OVTOKO_OVARY 37 3'UTR SNP C T uc001akf.2 PRDM16_uc001akc... Hybrid_Cap... view
PRKAR1B p.A67V 7 720341 720341 OVTOKO_OVARY 37 Missense_Mutation SNP G A uc003siu.1 PRKAR1B_uc003si... Hybrid_Cap... view
PRKCA 17 64298959 64298960 OVTOKO_OVARY 37 5'UTR Ins - G rs71160558 uc002jfp.1 PRKCA_uc002jfo.... Hybrid_Cap...
PRKDC p.L1244fs 8 48805816 48805817 OVTOKO_OVARY 37 Frame_Shift_Ins Ins - G rs67588121 uc003xqi.2 PRKDC_uc003xqj.... Hybrid_Cap...
RELA 11 65423023 65423023 OVTOKO_OVARY 37 Intron SNP G A rs76584376 uc010ron.1 RELA_uc001ofg.2... Hybrid_Cap... view
ROBO2 3 77666937 77666937 OVTOKO_OVARY 37 Intron Del A - rs78745603 uc003dpz.2 ROBO2_uc003dpy.... Hybrid_Cap...
RPS6KA5 14 91360733 91360734 OVTOKO_OVARY 37 Intron Ins - T rs77438853 uc001xys.2 RPS6KA5_uc010tw... Hybrid_Cap...
RUNX1 p.D84N 21 36259241 36259241 OVTOKO_OVARY 37 Missense_Mutation SNP C T uc010gmu.2 RUNX1_uc002yut.... Hybrid_Cap... view
SACS p.S2828G 13 23909533 23909533 OVTOKO_OVARY 37 Missense_Mutation SNP T C rs9552930 uc001uon.2 SACS_uc001uoo.2... Hybrid_Cap... view
SIK1 21 44836564 44836564 OVTOKO_OVARY 37 3'UTR SNP C T uc002zdf.2 Hybrid_Cap... view
SMURF2 p.A218T 17 62577027 62577027 OVTOKO_OVARY 37 Missense_Mutation SNP C T uc002jep.1 SMURF2_uc002jeq... Hybrid_Cap... view
SOX2 3 181431281 181431281 OVTOKO_OVARY 37 3'UTR SNP A G uc003fkx.2 SOX2OT_uc003fkv... Hybrid_Cap... view
SPEN p.E2365fs 1 16259828 16259828 OVTOKO_OVARY 37 Frame_Shift_Del Del G - uc001axk.1 SPEN_uc010obp.1... Hybrid_Cap...
SPEN p.R3011Q 1 16261767 16261767 OVTOKO_OVARY 37 Missense_Mutation SNP G A uc001axk.1 SPEN_uc010obp.1... Hybrid_Cap... view
STK25 2 242435659 242435662 OVTOKO_OVARY 37 Intron Del AAGG - rs3215138;rs75497042 uc002wbm.2 STK25_uc002wbk.... Hybrid_Cap...
STK31 7 23872024 23872025 OVTOKO_OVARY 37 3'UTR Ins - TTTG rs66787534 uc003sws.3 STK31_uc003swt.... Hybrid_Cap...
TEC 4 48139307 48139310 OVTOKO_OVARY 37 3'UTR Del TTAT - rs79098351 uc003gxz.2 Hybrid_Cap...
TFDP1 13 114292007 114292007 OVTOKO_OVARY 37 Intron SNP C T uc001vtw.2 TFDP1_uc010tkd.... Hybrid_Cap... view
THBS3 p.F18C 1 155177615 155177615 OVTOKO_OVARY 37 Missense_Mutation SNP A C uc001fix.2 RAG1AP1_uc010pe... Hybrid_Cap... view
TMPO p.H612N 12 98927869 98927869 OVTOKO_OVARY 37 Missense_Mutation SNP C A uc001tfh.1 TMPO_uc001tfi.1... Hybrid_Cap... view
TNNI3K p.R507I 1 74832979 74832979 OVTOKO_OVARY 37 Missense_Mutation SNP G T uc001dge.1 TNNI3K_uc001dgc... Hybrid_Cap... view
TTK p.S511C 6 80741194 80741194 OVTOKO_OVARY 37 Missense_Mutation SNP C G uc003pjc.2 TTK_uc003pjb.3_... Hybrid_Cap... view
TTN p.I28102T 2 179414440 179414440 OVTOKO_OVARY 37 Missense_Mutation SNP A G uc010zfg.1 TTN_uc010zfh.1_... Hybrid_Cap... view
TTN 2 179614801 179614801 OVTOKO_OVARY 37 Intron SNP G A uc010zfg.1 TTN_uc010zfh.1_... Hybrid_Cap... view
USP6 p.R895C 17 5058756 5058756 OVTOKO_OVARY 37 Missense_Mutation SNP C T uc002gau.1 USP6_uc002gav.1... Hybrid_Cap... view
VEGFC p.S419_splice 4 177605082 177605084 OVTOKO_OVARY 37 Splice_Site_Del Del TCA - uc003ius.1 Hybrid_Cap...