Annotation Summary for Cell Line: PA-TU-8902  

Cell line primary name: PA-TU-8902
Cell line aliases:
Gender: F
Site Primary: pancreas
Histology: carcinoma
Hist Subtype1: ductal_carcinoma
Notes:
Source: DSMZ
Expression arrays: BRAKE_p_NCLE_RNA2_HG-U133_Plus_2_G05_241194
SNP arrays: HONEY_p_NCLE_DNAAffy3_S_GenomeWideSNP_6_A05_293288
Oncomap: yes
Hybrid Capture Sequencing: yes


Mutations in PA-TU-8902

GeneProtein
Change
ChrStartEnd SampleNCBI
Build
Variant
Classification
Variant TypeReference
Allele
Tumor
Allele 1
dbSNP IDAnnotation
Transcript
Other
Transcripts
Method View
Reads
Mutation
Assessor
ABL2 1 179086419 179086420 PATU8902_PANCRE... 37 Intron Ins - A rs72207641 uc001gmj.3 ABL2_uc010pnf.1... Hybrid_Cap...
ADAM12 p.R647H 10 127734688 127734688 PATU8902_PANCRE... 37 Missense_Mutation SNP C T uc001ljk.2 ADAM12_uc010qul... Hybrid_Cap... view
ADAM28 8 24211994 24211997 PATU8902_PANCRE... 37 3'UTR Del CTAT - rs10610134 uc003xdy.2 ADAM28_uc011laa... Hybrid_Cap...
ADAMTS2 p.D176N 5 178770776 178770776 PATU8902_PANCRE... 37 Missense_Mutation SNP C T uc003mjw.2 ADAMTS2_uc011dg... Hybrid_Cap... view
AKAP12 p.1531_1532insE 6 151674116 151674117 PATU8902_PANCRE... 37 In_Frame_Ins Ins - GAG rs34737819 uc011eep.1 AKAP12_uc003qoe... Hybrid_Cap...
APC p.G2145V 5 112177725 112177725 PATU8902_PANCRE... 37 Missense_Mutation SNP G T uc010jby.2 APC_uc011cvt.1_... Hybrid_Cap... view
ATR p.1113_1114II>I 3 142266583 142266585 PATU8902_PANCRE... 37 In_Frame_Del Del ATG - uc003eux.3 Hybrid_Cap...
BTG1 12 92537706 92537707 PATU8902_PANCRE... 37 3'UTR Ins - TT rs33983967 uc001tby.3 BTG1_uc001tbv.1... Hybrid_Cap...
CAMKK2 12 121698342 121698342 PATU8902_PANCRE... 37 Intron SNP T C uc001tzu.2 CAMKK2_uc001tzt... Hybrid_Cap... view
CDH11 p.R709W 16 64981772 64981772 PATU8902_PANCRE... 37 Missense_Mutation SNP G A uc002eoi.2 CDH11_uc010cdn.... Hybrid_Cap... view
CIT p.G241* 12 120270607 120270607 PATU8902_PANCRE... 37 Nonsense_Mutation SNP C A uc001txj.1 CIT_uc001txi.1_... Hybrid_Cap... view
CLTCL1 p.V1201_splice 22 19189003 19189004 PATU8902_PANCRE... 37 Splice_Site_Ins Ins - C rs11386977 uc002zpb.2 CLTCL1_uc011agv... Hybrid_Cap...
CNTN6 3 1339681 1339686 PATU8902_PANCRE... 37 Intron Del GTTTT... - uc003boz.2 CNTN6_uc010hbo.... Hybrid_Cap...
CREB3L2 p.T100del 7 137612914 137612916 PATU8902_PANCRE... 37 In_Frame_Del Del TGG - uc003vtw.2 CREB3L2_uc003vt... Hybrid_Cap...
DACH1 13 72014625 72014626 PATU8902_PANCRE... 37 3'UTR Ins - T rs117109529 uc010thn.1 DACH1_uc010tho.... Hybrid_Cap...
DAPK1 p.S1314T 9 90321927 90321927 PATU8902_PANCRE... 37 Missense_Mutation SNP G C uc004apc.2 DAPK1_uc004apd.... Hybrid_Cap... view
EIF4A1 p.R295G 17 7481001 7481001 PATU8902_PANCRE... 37 Missense_Mutation SNP C G uc002gho.1 EIF4A1_uc002ghr... Hybrid_Cap... view
EIF4E 4 99808137 99808141 PATU8902_PANCRE... 37 Intron Del TTAAA - uc011ceb.1 EIF4E_uc011cea.... Hybrid_Cap...
EIF4G1 p.A328V 3 184039334 184039334 PATU8902_PANCRE... 37 Missense_Mutation SNP C T uc010hxx.2 EIF4G1_uc003fno... Hybrid_Cap... view
EP300 p.S1650Y 22 41572420 41572420 PATU8902_PANCRE... 37 Missense_Mutation SNP C A uc003azl.3 Hybrid_Cap... view
EPHA3 p.C306* 3 89390169 89390169 PATU8902_PANCRE... 37 Nonsense_Mutation SNP T A uc003dqy.2 EPHA3_uc003dqx.... Hybrid_Cap... view
EPHA6 3 97367230 97367231 PATU8902_PANCRE... 37 Intron Ins - A rs115253553 uc010how.1 EPHA6_uc003drs.... Hybrid_Cap...
EPHA8 p.H865Q 1 22927447 22927447 PATU8902_PANCRE... 37 Missense_Mutation SNP C G uc001bfx.1 Hybrid_Cap... view
EPHB6 p.S176del 7 142562052 142562054 PATU8902_PANCRE... 37 In_Frame_Del Del CCT - rs8177142 uc011kst.1 EPHB6_uc011ksu.... Hybrid_Cap...
ETV1 7 14028708 14028708 PATU8902_PANCRE... 37 5'UTR Del A - rs77190713 uc011jxq.1 ETV1_uc011jxn.1... Hybrid_Cap...
FGFR1OP 6 167453519 167453520 PATU8902_PANCRE... 37 3'UTR Ins - T rs115519488 uc003qvj.2 CCR6_uc003qvl.2... Hybrid_Cap...
FGFR3 4 1809128 1809129 PATU8902_PANCRE... 37 3'UTR Del GT - uc003gdu.2 FGFR3_uc003gdr.... Hybrid_Cap...
FLI1 11 128638217 128638217 PATU8902_PANCRE... 37 Intron Del G - uc010sbu.1 FLI1_uc010sbt.1... Hybrid_Cap...
GLYAT p.T31N 11 58482886 58482886 PATU8902_PANCRE... 37 Missense_Mutation SNP G T uc001nnb.2 GLYAT_uc001nnc.... Hybrid_Cap... view
GPC3 p.D557V X 132670294 132670294 PATU8902_PANCRE... 37 Missense_Mutation SNP T A uc010nrn.1 GPC3_uc004exd.1... Hybrid_Cap... view
GPR183 13 99947147 99947147 PATU8902_PANCRE... 37 3'UTR SNP A T uc001vog.2 UBAC2_uc001voa.... Hybrid_Cap... view
GPR87 p.V144A 3 151012603 151012603 PATU8902_PANCRE... 37 Missense_Mutation SNP A G uc003eyt.2 MED12L_uc011bnz... Hybrid_Cap... view
GRIN2A p.P1154L 16 9857940 9857940 PATU8902_PANCRE... 37 Missense_Mutation SNP G A uc002czo.3 GRIN2A_uc010uym... Hybrid_Cap... view
GUCY2C 12 14827464 14827466 PATU8902_PANCRE... 37 Intron Del ATC - rs72525754;rs3083879 uc001rcd.2 GUCY2C_uc009zhz... Hybrid_Cap...
HIF1A p.M788I 14 62213683 62213683 PATU8902_PANCRE... 37 Missense_Mutation SNP G C uc001xfs.2 HIF1A_uc001xfq.... Hybrid_Cap... view
HNF1A 12 121434630 121434631 PATU8902_PANCRE... 37 Intron Ins - TCATTCAT rs75100977 uc010szn.1 HNF1A_uc001tze.... Hybrid_Cap...
HNRNPA2B1 7 26240350 26240350 PATU8902_PANCRE... 37 5'UTR SNP C G uc003sxr.3 HNRNPA2B1_uc003... Hybrid_Cap... view
HSP90B1 p.E791del 12 104341188 104341190 PATU8902_PANCRE... 37 In_Frame_Del Del GAA - rs117491163 uc001tkb.1 HSP90B1_uc010sw... Hybrid_Cap...
ILK 11 6630029 6630029 PATU8902_PANCRE... 37 Intron Del C - uc001mee.2 ILK_uc001mef.2_... Hybrid_Cap...
INHBA 7 41740072 41740073 PATU8902_PANCRE... 37 5'UTR Ins - A uc003thq.2 LOC285954_uc003... Hybrid_Cap...
IRAK3 p.V55F 12 66597520 66597520 PATU8902_PANCRE... 37 Missense_Mutation SNP G T uc001sth.2 IRAK3_uc010ssy.... Hybrid_Cap... view
ITPR2 p.R470_splice 12 26834804 26834805 PATU8902_PANCRE... 37 Splice_Site_Ins Ins - ACTC rs66696203;rs59199365 uc001rhg.2 Hybrid_Cap...
JAK3 p.R121H 19 17954247 17954247 PATU8902_PANCRE... 37 Missense_Mutation SNP C T uc002nhn.3 JAK3_uc010ebh.2... Hybrid_Cap... view
KRAS p.G12V 12 25398284 25398284 PATU8902_PANCRE... 37 Missense_Mutation SNP C A uc001rgp.1 KRAS_uc001rgq.1... Hybrid_Cap... view
LAMA1 p.V1124F 18 7012131 7012131 PATU8902_PANCRE... 37 Missense_Mutation SNP C A uc002knm.2 LAMA1_uc010wzj.... Hybrid_Cap... view
MAML3 p.Q767_splice 4 140651585 140651587 PATU8902_PANCRE... 37 Splice_Site_Del Del CTG - uc003ihz.1 MGST2_uc010ioi.... Hybrid_Cap...
MAP3K1 p.T949del 5 56177849 56177851 PATU8902_PANCRE... 37 In_Frame_Del Del CAA - uc003jqw.3 Hybrid_Cap...
MAP3K14 p.R218_splice 17 43364293 43364294 PATU8902_PANCRE... 37 Splice_Site_Ins Ins - G rs66766023 uc002iiw.1 MAP3K14_uc010da... Hybrid_Cap...
MAPKAPK3 3 50685575 50685575 PATU8902_PANCRE... 37 3'UTR Del A - rs76026164 uc003day.1 MAPKAPK3_uc003d... Hybrid_Cap...
MCF2 X 138724841 138724842 PATU8902_PANCRE... 37 Intron Ins - A uc011mwo.1 MCF2_uc004fau.2... Hybrid_Cap...
MLL3 p.Y816fs 7 151945071 151945072 PATU8902_PANCRE... 37 Frame_Shift_Ins Ins - T uc003wla.2 Hybrid_Cap...
MYLK3 p.R525Q 16 46763594 46763594 PATU8902_PANCRE... 37 Missense_Mutation SNP C T uc002eei.3 MYLK3_uc010vge.... Hybrid_Cap... view
NCAM1 11 112832307 112832308 PATU8902_PANCRE... 37 5'UTR Ins - A rs117108942 uc009yyq.1 NCAM1_uc001pno.... Hybrid_Cap...
NCAM1 11 112832340 112832340 PATU8902_PANCRE... 37 5'UTR Del C - uc009yyq.1 NCAM1_uc001pno.... Hybrid_Cap...
NCOA3 p.Q1276del 20 46279837 46279839 PATU8902_PANCRE... 37 In_Frame_Del Del CAG - rs2664555 uc002xtk.2 NCOA3_uc010ght.... Hybrid_Cap...
NEK3 p.K313_splice 13 52718050 52718051 PATU8902_PANCRE... 37 Splice_Site_Ins Ins - T rs72514762 uc001vgh.2 NEK3_uc001vgg.2... Hybrid_Cap...
NFIA 1 61921185 61921186 PATU8902_PANCRE... 37 3'UTR Ins - T rs57270124;rs76131997 uc010oos.1 NFIA_uc001czy.2... Hybrid_Cap...
NONO X 70514048 70514074 PATU8902_PANCRE... 37 Intron Del AGTTA... - uc004dzo.2 BCYRN1_uc011mpt... Hybrid_Cap...
NOTCH4 p.L16del 6 32191689 32191691 PATU8902_PANCRE... 37 In_Frame_Del Del AGT - rs9281675;rs66464940 uc003obb.2 NOTCH4_uc011dpu... Hybrid_Cap...
NPR1 1 153665919 153665920 PATU8902_PANCRE... 37 3'UTR Ins - C rs66682713 uc001fcs.3 NPR1_uc010pdz.1... Hybrid_Cap...
NR1H2 p.176_177insQ 19 50881820 50881821 PATU8902_PANCRE... 37 In_Frame_Ins Ins - AAC rs66783852;rs112359270 uc010enw.2 NR1H2_uc002prv.... Hybrid_Cap...
NRK p.K1409T X 105190329 105190329 PATU8902_PANCRE... 37 Missense_Mutation SNP A C uc004emd.2 NRK_uc011msi.1_... Hybrid_Cap... view
OBSCN p.D4135fs 1 228495171 228495171 PATU8902_PANCRE... 37 Frame_Shift_Del Del C - uc009xez.1 OBSCN_uc001hsn.... Hybrid_Cap...
PBX1 p.S343N 1 164789338 164789339 PATU8902_PANCRE... 37 Missense_Mutation DNP TC AA uc001gct.2 PBX1_uc010pku.1... Hybrid_Cap...
PCSK7 p.E66D 11 117100363 117100363 PATU8902_PANCRE... 37 Missense_Mutation SNP C G uc001pqr.2 Hybrid_Cap... view
PDE4DIP p.Q1665fs 1 144873963 144873963 PATU8902_PANCRE... 37 Frame_Shift_Del Del T - uc001elw.3 NBPF10_uc009wir... Hybrid_Cap...
PDE4DIP p.V486fs 1 144917828 144917828 PATU8902_PANCRE... 37 Frame_Shift_Del Del A - uc001elw.3 NBPF10_uc009wir... Hybrid_Cap...
PDGFRA 4 55131002 55131002 PATU8902_PANCRE... 37 Intron Del A - uc003han.3 PDGFRA_uc003haa... Hybrid_Cap...
PDIK1L 1 26449233 26449233 PATU8902_PANCRE... 37 3'UTR SNP C T uc010oew.1 PDIK1L_uc001blj... Hybrid_Cap... view
PGR 11 100933598 100933599 PATU8902_PANCRE... 37 Intron Ins - AATGA rs35148438 uc001pgh.2 PGR_uc001pgg.2_... Hybrid_Cap...
PHOX2B 4 41747798 41747798 PATU8902_PANCRE... 37 3'UTR SNP C T uc003gwf.3 Hybrid_Cap... view
PIK3C2G p.P129del 12 18435399 18435401 PATU8902_PANCRE... 37 In_Frame_Del Del CCC - uc010sib.1 PIK3C2G_uc001rd... Hybrid_Cap...
PLK2 5 57755065 57755065 PATU8902_PANCRE... 37 Intron SNP A G uc003jrn.2 PLK2_uc011cql.1... Hybrid_Cap... view
PPP3CB p.L283V 10 75230685 75230685 PATU8902_PANCRE... 37 Missense_Mutation SNP A C uc001juf.2 PPP3CB_uc001jue... Hybrid_Cap... view
PRKDC p.L1244fs 8 48805816 48805817 PATU8902_PANCRE... 37 Frame_Shift_Ins Ins - G rs67588121 uc003xqi.2 PRKDC_uc003xqj.... Hybrid_Cap...
RANBP9 p.Q331K 6 13644898 13644898 PATU8902_PANCRE... 37 Missense_Mutation SNP G T uc003nbb.2 RANBP9_uc003nba... Hybrid_Cap... view
RECQL4 p.R766fs 8 145738768 145738768 PATU8902_PANCRE... 37 Frame_Shift_Del Del G - uc003zdj.2 Hybrid_Cap...
RIMS2 p.F21Y 8 104831797 104831797 PATU8902_PANCRE... 37 Missense_Mutation SNP T A uc003ylw.2 RIMS2_uc003ylp.... Hybrid_Cap... view
RPS6KA5 14 91360733 91360734 PATU8902_PANCRE... 37 Intron Ins - T rs77438853 uc001xys.2 RPS6KA5_uc010tw... Hybrid_Cap...
RPS6KL1 14 75373626 75373627 PATU8902_PANCRE... 37 3'UTR Ins - TGAT uc001xqx.1 RPS6KL1_uc001xq... Hybrid_Cap...
RPTOR 17 78938190 78938190 PATU8902_PANCRE... 37 3'UTR SNP C T uc002jyt.1 RPTOR_uc010wug.... Hybrid_Cap... view
SIRT1 10 69676547 69676548 PATU8902_PANCRE... 37 3'UTR Ins - T rs61666042 uc001jnd.2 SIRT1_uc010qis.... Hybrid_Cap...
SKIL p.R536T 3 170108188 170108188 PATU8902_PANCRE... 37 Missense_Mutation SNP G C uc003fgu.2 SKIL_uc011bps.1... Hybrid_Cap... view
SNX19 p.H550Y 11 130784187 130784187 PATU8902_PANCRE... 37 Missense_Mutation SNP G A uc001qgk.3 SNX19_uc010sce.... Hybrid_Cap... view
STK31 7 23872024 23872025 PATU8902_PANCRE... 37 3'UTR Ins - TTTG rs66787534 uc003sws.3 STK31_uc003swt.... Hybrid_Cap...
STRADA 17 61781331 61781332 PATU8902_PANCRE... 37 Intron Ins - AGAACC rs66701913 uc002jbm.2 STRADA_uc002jbn... Hybrid_Cap...
TEC 4 48139307 48139310 PATU8902_PANCRE... 37 3'UTR Del TTAT - rs79098351 uc003gxz.2 Hybrid_Cap...
TFRC 3 195778536 195778536 PATU8902_PANCRE... 37 3'UTR Del A - uc003fvz.3 TFRC_uc003fwa.3... Hybrid_Cap...
TLK1 2 171850178 171850179 PATU8902_PANCRE... 37 3'UTR Ins - AA rs71008739 uc002ugo.2 TLK1_uc002ugn.2... Hybrid_Cap...
TMEM123 11 102269398 102269398 PATU8902_PANCRE... 37 3'UTR Del G - uc001pha.2 TMEM123_uc009yx... Hybrid_Cap...
TP53 p.C176S 17 7578404 7578404 PATU8902_PANCRE... 37 Missense_Mutation SNP A T uc002gim.2 TP53_uc002gig.1... Hybrid_Cap... view
TTBK1 p.E771del 6 43250726 43250728 PATU8902_PANCRE... 37 In_Frame_Del Del GAA - uc003ouq.1 Hybrid_Cap...
VEGFC p.S419_splice 4 177605082 177605084 PATU8902_PANCRE... 37 Splice_Site_Del Del TCA - uc003ius.1 Hybrid_Cap...
VPS13B p.E1348K 8 100514086 100514086 PATU8902_PANCRE... 37 Missense_Mutation SNP G A uc003yiv.2 VPS13B_uc003yiw... Hybrid_Cap... view
VRK3 p.A341S 19 50492971 50492971 PATU8902_PANCRE... 37 Missense_Mutation SNP C A uc002prg.2 VRK3_uc002prh.1... Hybrid_Cap... view
ZMYM2 p.K1367* 13 20660119 20660119 PATU8902_PANCRE... 37 Nonsense_Mutation SNP A T uc001umr.2 ZMYM2_uc001ums.... Hybrid_Cap... view