Annotation Summary for Cell Line: PC-14  

Cell line primary name: PC-14
Cell line aliases:
Gender:
Site Primary: lung
Histology: carcinoma
Hist Subtype1: non_small_cell_carcinoma
Notes:
Source: RIKEN
Expression arrays: BRAKE_p_NCLE_RNA2_HG-U133_Plus_2_G01_241186
SNP arrays: FASTS_p_NCLE_DNAAffy4_S_GenomeWideSNP_6_B03_335216
Oncomap: yes
Hybrid Capture Sequencing: yes


Mutations in PC-14

GeneProtein
Change
ChrStartEnd SampleNCBI
Build
Variant
Classification
Variant TypeReference
Allele
Tumor
Allele 1
dbSNP IDAnnotation
Transcript
Other
Transcripts
Method View
Reads
Mutation
Assessor
ADAM28 8 24211994 24211997 PC14_LUNG 37 3'UTR Del CTAT - rs10610134 uc003xdy.2 ADAM28_uc011laa... Hybrid_Cap...
ADAM29 4 175899245 175899245 PC14_LUNG 37 3'UTR SNP C T uc003iuc.2 ADAM29_uc003iud... Hybrid_Cap... view
AIM1 p.R783C 6 106968654 106968654 PC14_LUNG 37 Missense_Mutation SNP C T uc003prh.2 Hybrid_Cap... view
ALPK1 4 113347609 113347610 PC14_LUNG 37 Intron Ins - T rs68137453 uc003iap.3 ALPK1_uc003ian.... Hybrid_Cap...
ASPH p.A264_splice 8 62550924 62550925 PC14_LUNG 37 Splice_Site_Ins Ins - A rs5891816 uc003xuj.2 ASPH_uc011leg.1... Hybrid_Cap...
ATP10A p.H908N 15 25947101 25947101 PC14_LUNG 37 Missense_Mutation SNP G T uc010ayu.2 Hybrid_Cap... view
AURKC 19 57742531 57742532 PC14_LUNG 37 5'UTR Ins - C uc002qoe.2 AURKC_uc002qoc.... Hybrid_Cap...
BLM p.R791C 15 91312426 91312426 PC14_LUNG 37 Missense_Mutation SNP C T rs55880859 uc002bpr.2 BLM_uc010uqh.1_... Hybrid_Cap... view
CACNB2 10 18828721 18828722 PC14_LUNG 37 3'UTR Ins - AA rs3841459 uc001ipr.2 CACNB2_uc009xjz... Hybrid_Cap...
CLTCL1 p.V1201_splice 22 19189003 19189004 PC14_LUNG 37 Splice_Site_Ins Ins - C rs11386977 uc002zpb.2 CLTCL1_uc011agv... Hybrid_Cap...
COL4A3BP p.V581I 5 74681787 74681787 PC14_LUNG 37 Missense_Mutation SNP C T uc003kdt.2 COL4A3BP_uc011c... Hybrid_Cap... view
COL4A3BP p.R339H 5 74715213 74715213 PC14_LUNG 37 Missense_Mutation SNP C T uc003kdt.2 COL4A3BP_uc011c... Hybrid_Cap... view
CSF3R p.G366R 1 36937223 36937223 PC14_LUNG 37 Missense_Mutation SNP C T uc001cax.1 CSF3R_uc001cat.... Hybrid_Cap... view
CTNNB1 3 41275492 41275492 PC14_LUNG 37 Intron SNP G A uc010hia.1 CTNNB1_uc003ckp... Hybrid_Cap... view
CXCL12 10 44873992 44873993 PC14_LUNG 37 Intron Ins - CT rs117617571 uc001jbh.2 CXCL12_uc001jbf... Hybrid_Cap...
DACH1 p.R650Q 13 72049903 72049903 PC14_LUNG 37 Missense_Mutation SNP C T uc010thn.1 DACH1_uc010tho.... Hybrid_Cap... view
DGKB 7 14216345 14216346 PC14_LUNG 37 Intron Ins - AGACT uc003ssz.2 DGKB_uc011jxt.1... Hybrid_Cap...
DSTYK p.I728T 1 205128730 205128730 PC14_LUNG 37 Missense_Mutation SNP A G uc001hbw.2 DSTYK_uc001hbx.... Hybrid_Cap... view
EGFR p.ELREA746del 7 55242465 55242479 PC14_LUNG 37 In_Frame_Del Del GGAAT... - uc003tqk.2 EGFR_uc010kzg.1... Hybrid_Cap...
EPHA5 p.S674T 4 66231683 66231683 PC14_LUNG 37 Missense_Mutation SNP A T rs56359290 uc011cah.1 EPHA5_uc003hcx.... Hybrid_Cap... view
EPHA6 3 97367230 97367231 PC14_LUNG 37 Intron Ins - A rs115253553 uc010how.1 EPHA6_uc003drs.... Hybrid_Cap...
ETV1 7 14028708 14028708 PC14_LUNG 37 5'UTR Del A - rs77190713 uc011jxq.1 ETV1_uc011jxn.1... Hybrid_Cap...
EXT2 p.T122M 11 44129528 44129528 PC14_LUNG 37 Missense_Mutation SNP C T uc001mya.2 EXT2_uc010rfo.1... Hybrid_Cap... view
FANCM p.L1785V 14 45665387 45665387 PC14_LUNG 37 Missense_Mutation SNP T G uc001wwd.3 FANCM_uc010anf.... Hybrid_Cap... view
FGFR1OP 6 167453519 167453520 PC14_LUNG 37 3'UTR Ins - T rs115519488 uc003qvj.2 CCR6_uc003qvl.2... Hybrid_Cap...
FLI1 11 128638217 128638217 PC14_LUNG 37 Intron Del G - uc010sbu.1 FLI1_uc010sbt.1... Hybrid_Cap...
FN1 2 216244182 216244185 PC14_LUNG 37 Intron Del GTAC - uc002vfa.2 FN1_uc002vfb.2_... Hybrid_Cap...
FOXP1 3 71008341 71008342 PC14_LUNG 37 3'UTR Ins - T rs11433724;rs114233617 uc003dol.2 FOXP1_uc003dom.... Hybrid_Cap...
GPR112 p.D2657del X 135474445 135474447 PC14_LUNG 37 In_Frame_Del Del GAT - rs3030295 uc004ezu.1 GPR112_uc010nsb... Hybrid_Cap...
GRIA3 X 122318386 122318387 PC14_LUNG 37 Splice_Site_Ins Ins - G rs66632982 uc004etq.3 GRIA3_uc004etr.... Hybrid_Cap...
GUCY2C 12 14827464 14827466 PC14_LUNG 37 Intron Del ATC - rs72525754;rs3083879 uc001rcd.2 GUCY2C_uc009zhz... Hybrid_Cap...
HNF1A 12 121434630 121434631 PC14_LUNG 37 Intron Ins - TCATTCAT rs75100977 uc010szn.1 HNF1A_uc001tze.... Hybrid_Cap...
HSP90B1 p.E791del 12 104341188 104341190 PC14_LUNG 37 In_Frame_Del Del GAA - rs117491163 uc001tkb.1 HSP90B1_uc010sw... Hybrid_Cap...
ILK 11 6630029 6630029 PC14_LUNG 37 Intron Del C - uc001mee.2 ILK_uc001mef.2_... Hybrid_Cap...
ITGB8 7 20449664 20449664 PC14_LUNG 37 3'UTR SNP A G uc003suu.2 ITGB8_uc011jyh.... Hybrid_Cap... view
LRRC7 p.Q1196E 1 70505207 70505207 PC14_LUNG 37 Missense_Mutation SNP C G uc001dep.2 LRRC7_uc009wbg.... Hybrid_Cap... view
MAML3 p.Q767_splice 4 140651585 140651587 PC14_LUNG 37 Splice_Site_Del Del CTG - uc003ihz.1 MGST2_uc010ioi.... Hybrid_Cap...
MAP3K14 p.R218_splice 17 43364293 43364294 PC14_LUNG 37 Splice_Site_Ins Ins - G rs66766023 uc002iiw.1 MAP3K14_uc010da... Hybrid_Cap...
MAPKAPK5 p.I273M 12 112321543 112321543 PC14_LUNG 37 Missense_Mutation SNP C G uc001tta.2 MAPKAPK5_uc001t... Hybrid_Cap... view
MAST4 p.V1255M 5 66459337 66459337 PC14_LUNG 37 Missense_Mutation SNP G A uc003jut.1 MAST4_uc003juw.... Hybrid_Cap... view
MCF2 X 138724841 138724842 PC14_LUNG 37 Intron Ins - A uc011mwo.1 MCF2_uc004fau.2... Hybrid_Cap...
MCL1 1 150549737 150549744 PC14_LUNG 37 3'UTR Del GCTAG... - rs116997851 uc001euz.2 MCL1_uc010pch.1... Hybrid_Cap...
MLLT6 17 36881873 36881873 PC14_LUNG 37 3'UTR Del C - uc002hqi.3 MLLT6_uc002hqk.... Hybrid_Cap...
MYH1 p.R1283H 17 10403960 10403960 PC14_LUNG 37 Missense_Mutation SNP C T uc002gmo.2 Hybrid_Cap... view
MYLK p.Y1353S 3 123376203 123376203 PC14_LUNG 37 Missense_Mutation SNP T G uc003ego.2 MYLK_uc010hrr.2... Hybrid_Cap... view
NCAM1 11 112832307 112832308 PC14_LUNG 37 5'UTR Ins - A rs117108942 uc009yyq.1 NCAM1_uc001pno.... Hybrid_Cap...
NCOA3 p.P261S 20 46256725 46256725 PC14_LUNG 37 Missense_Mutation SNP C T uc002xtk.2 NCOA3_uc010ght.... Hybrid_Cap... view
NOTCH4 p.15_16LL>L 6 32191659 32191661 PC14_LUNG 37 In_Frame_Del Del AGC - uc003obb.2 NOTCH4_uc011dpu... Hybrid_Cap...
NPR1 1 153665919 153665920 PC14_LUNG 37 3'UTR Ins - C rs66682713 uc001fcs.3 NPR1_uc010pdz.1... Hybrid_Cap...
NR1H2 p.176_177insQ 19 50881820 50881821 PC14_LUNG 37 In_Frame_Ins Ins - AAC rs66783852;rs112359270 uc010enw.2 NR1H2_uc002prv.... Hybrid_Cap...
NR1H2 p.176_177insQ 19 50881822 50881823 PC14_LUNG 37 In_Frame_Ins Ins - CAG rs61751954;rs1052533 uc010enw.2 NR1H2_uc002prv.... Hybrid_Cap...
NUP214 9 134067556 134067557 PC14_LUNG 37 Intron Ins - T rs66652901 uc004cag.2 NUP214_uc004cah... Hybrid_Cap...
PAX3 2 223066017 223066018 PC14_LUNG 37 Intron Ins - C rs115619343 uc002vmt.1 PAX3_uc002vmy.1... Hybrid_Cap...
PAX3 2 223158653 223158653 PC14_LUNG 37 Intron Del T - rs112753212 uc002vmt.1 PAX3_uc002vmy.1... Hybrid_Cap...
PCDH15 p.1445_1446PP>P 10 55587198 55587200 PC14_LUNG 37 In_Frame_Del Del GGC - rs12246234 uc010qhy.1 PCDH15_uc010qhq... Hybrid_Cap...
PDE4DIP p.L601fs 1 144915624 144915624 PC14_LUNG 37 Frame_Shift_Del Del G - rs1778112 uc001elw.3 NBPF10_uc009wir... Hybrid_Cap...
PDE4DIP p.E243fs 1 144923729 144923729 PC14_LUNG 37 Frame_Shift_Del Del T - uc001elw.3 NBPF10_uc009wir... Hybrid_Cap...
PDGFRA p.N232S 4 54257655 54257655 PC14_LUNG 37 Missense_Mutation SNP A G uc003haa.2 FIP1L1_uc003gzx... Hybrid_Cap... view
PIK3C2A 11 17111198 17111199 PC14_LUNG 37 3'UTR Del GT - uc001mmq.3 PIK3C2A_uc009yg... Hybrid_Cap...
PIK3C2G p.P129del 12 18435399 18435401 PC14_LUNG 37 In_Frame_Del Del CCC - uc010sib.1 PIK3C2G_uc001rd... Hybrid_Cap...
PLD1 3 171395567 171395567 PC14_LUNG 37 Intron SNP C T uc003fhs.2 PLD1_uc003fht.2... Hybrid_Cap... view
PRKCA p.T54T 17 64299131 64299131 PC14_LUNG 37 Silent SNP C T uc002jfp.1 PRKCA_uc002jfo.... Hybrid_Cap... view
PRKCD 3 53215796 53215796 PC14_LUNG 37 Intron SNP C T uc003dgl.2 PRKCD_uc003dgm.... Hybrid_Cap... view
PRKDC p.L1244fs 8 48805816 48805817 PC14_LUNG 37 Frame_Shift_Ins Ins - G rs67588121 uc003xqi.2 PRKDC_uc003xqj.... Hybrid_Cap...
PTCH2 p.L104P 1 45297968 45297968 PC14_LUNG 37 Missense_Mutation SNP A G rs80168454 uc010olf.1 PTCH2_uc010olg.... Hybrid_Cap... view
RBPJ p.S465A 4 26432519 26432519 PC14_LUNG 37 Missense_Mutation SNP T G uc003grx.1 RBPJ_uc003gry.1... Hybrid_Cap... view
RECQL4 p.R766fs 8 145738768 145738768 PC14_LUNG 37 Frame_Shift_Del Del G - uc003zdj.2 Hybrid_Cap...
SCRIB p.R1091M 8 144885959 144885959 PC14_LUNG 37 Missense_Mutation SNP C A uc003yzo.1 SCRIB_uc003yzn.... Hybrid_Cap... view
SEMA3B p.D569_splice 3 50313047 50313047 PC14_LUNG 37 Splice_Site_SNP SNP G A uc003cyu.2 SEMA3B_uc003cyt... Hybrid_Cap... view
STK25 2 242435659 242435662 PC14_LUNG 37 Intron Del AAGG - rs3215138;rs75497042 uc002wbm.2 STK25_uc002wbk.... Hybrid_Cap...
STK31 7 23872024 23872025 PC14_LUNG 37 3'UTR Ins - TTTG rs66787534 uc003sws.3 STK31_uc003swt.... Hybrid_Cap...
SULF1 p.G529E 8 70533478 70533478 PC14_LUNG 37 Missense_Mutation SNP G A uc010lza.1 SULF1_uc003xyd.... Hybrid_Cap... view
TNK2 p.A712T 3 195595224 195595224 PC14_LUNG 37 Missense_Mutation SNP C T uc003fvt.1 TNK2_uc003fvq.1... Hybrid_Cap... view
TNK2 p.P706P 3 195595240 195595240 PC14_LUNG 37 Silent SNP C T uc003fvt.1 TNK2_uc003fvq.1... Hybrid_Cap... view
TNK2 3 195595647 195595647 PC14_LUNG 37 Intron SNP G A uc003fvt.1 TNK2_uc003fvq.1... Hybrid_Cap... view
TP53 p.R248Q 17 7577538 7577538 PC14_LUNG 37 Missense_Mutation SNP C T rs11540652 uc002gim.2 TP53_uc002gig.1... Hybrid_Cap... view
TRIM33 1 114940212 114940212 PC14_LUNG 37 3'UTR Del T - uc001eew.2 TRIM33_uc010owr... Hybrid_Cap...
TRPM6 p.A1268T 9 77377785 77377785 PC14_LUNG 37 Missense_Mutation SNP C T uc004ajl.1 TRPM6_uc004ajk.... Hybrid_Cap... view
VEGFC p.S419_splice 4 177605082 177605084 PC14_LUNG 37 Splice_Site_Del Del TCA - uc003ius.1 Hybrid_Cap...