Annotation Summary for Cell Line: SNU-182  

Cell line primary name: SNU-182
Cell line aliases: NCI-SNU-182
Gender: M
Site Primary: liver
Histology: carcinoma
Hist Subtype1: hepatocellular_carcinoma
Notes:
Source: ATCC
Expression arrays: CASED_p_NCLE_RNA4_HG-U133_Plus_2_C03_383636
SNP arrays: SKATS_p_NCLE_DNAAffy13_GenomeWideSNP_6_C03_592888
Oncomap: yes
Hybrid Capture Sequencing: yes


Mutations in SNU-182

GeneProtein
Change
ChrStartEnd SampleNCBI
Build
Variant
Classification
Variant TypeReference
Allele
Tumor
Allele 1
dbSNP IDAnnotation
Transcript
Other
Transcripts
Method View
Reads
Mutation
Assessor
AAK1 p.541_542QQ>Q 2 69741754 69741756 SNU182_LIVER 37 In_Frame_Del Del TGT - rs55712143 uc002sfp.2 AAK1_uc010fdk.2... Hybrid_Cap...
ABCA3 p.L654V 16 2347859 2347859 SNU182_LIVER 37 Missense_Mutation SNP G C uc002cpy.1 ABCA3_uc010bsk.... Hybrid_Cap... view
ADAM28 8 24211994 24211997 SNU182_LIVER 37 3'UTR Del CTAT - rs10610134 uc003xdy.2 ADAM28_uc011laa... Hybrid_Cap...
ADAMTS19 p.R1092Q 5 129040065 129040065 SNU182_LIVER 37 Missense_Mutation SNP G A uc003kvb.1 ADAMTS19_uc010j... Hybrid_Cap... view
AKAP12 p.1531_1532insE 6 151674116 151674117 SNU182_LIVER 37 In_Frame_Ins Ins - GAG rs34737819 uc011eep.1 AKAP12_uc003qoe... Hybrid_Cap...
AKAP9 p.1335_1336insQ 7 91652178 91652179 SNU182_LIVER 37 In_Frame_Ins Ins - AAC rs34756483 uc003ulg.2 AKAP9_uc003ule.... Hybrid_Cap...
ALPK1 4 113347609 113347610 SNU182_LIVER 37 Intron Ins - T rs68137453 uc003iap.3 ALPK1_uc003ian.... Hybrid_Cap...
ALPK2 p.EDTST1006del 18 56204388 56204402 SNU182_LIVER 37 In_Frame_Del Del CAGTT... - rs60644017;rs117623369 uc002lhj.3 ALPK2_uc002lhk.... Hybrid_Cap...
AMZ2 p.L296S 17 66251977 66251977 SNU182_LIVER 37 Missense_Mutation SNP T C uc002jgs.1 AMZ2_uc002jgr.1... Hybrid_Cap... view
BCL3 19 45262965 45262965 SNU182_LIVER 37 3'UTR Del C - uc010xxe.1 Hybrid_Cap...
BUB1B p.R199P 15 40475929 40475929 SNU182_LIVER 37 Missense_Mutation SNP G C uc001zkx.3 BUB1B_uc010ucl.... Hybrid_Cap... view
C6ORF97 p.F326L 6 151894510 151894510 SNU182_LIVER 37 Missense_Mutation SNP T C uc003qol.2 Hybrid_Cap... view
CHRNA5 15 78885615 78885616 SNU182_LIVER 37 3'UTR Ins - TA rs72534078 uc002bdy.2 CHRNA3_uc002bea... Hybrid_Cap...
CIT p.R1214H 12 120159205 120159205 SNU182_LIVER 37 Missense_Mutation SNP C T uc001txj.1 CIT_uc001txh.1_... Hybrid_Cap... view
CLTCL1 p.V1201_splice 22 19189003 19189004 SNU182_LIVER 37 Splice_Site_Ins Ins - C rs11386977 uc002zpb.2 CLTCL1_uc011agv... Hybrid_Cap...
CNTN6 3 1339681 1339686 SNU182_LIVER 37 Intron Del GTTTT... - uc003boz.2 CNTN6_uc010hbo.... Hybrid_Cap...
CREB3L2 p.T100del 7 137612914 137612916 SNU182_LIVER 37 In_Frame_Del Del TGG - uc003vtw.2 CREB3L2_uc003vt... Hybrid_Cap...
CSPG4 p.A1802T 15 75969456 75969456 SNU182_LIVER 37 Missense_Mutation SNP C T uc002baw.2 Hybrid_Cap... view
CYP1B1 2 38297654 38297655 SNU182_LIVER 37 3'UTR Ins - A rs9341258 uc002rqo.2 Hybrid_Cap...
DNAH8 p.N4438S 6 38998008 38998008 SNU182_LIVER 37 Missense_Mutation SNP A G uc003ooe.1 Hybrid_Cap... view
EIF2B5 3 183862875 183862875 SNU182_LIVER 37 3'UTR SNP T G uc003fmp.2 EIF2B5_uc003fmq... Hybrid_Cap... view
EIF3A p.V1330F 10 120795712 120795712 SNU182_LIVER 37 Missense_Mutation SNP C A uc001ldu.2 EIF3A_uc010qsu.... Hybrid_Cap... view
EPHA5 4 66189800 66189800 SNU182_LIVER 37 3'UTR SNP C G uc011cah.1 EPHA5_uc003hcx.... Hybrid_Cap... view
EPHA6 3 96963161 96963161 SNU182_LIVER 37 Intron SNP G T uc010how.1 EPHA6_uc003drp.... Hybrid_Cap... view
EPS15 1 51822188 51822189 SNU182_LIVER 37 3'UTR Ins - A rs115066650 uc001csq.1 EPS15_uc009vyz.... Hybrid_Cap...
ERCC5 p.T559M 13 103506156 103506156 SNU182_LIVER 37 Missense_Mutation SNP C T uc001vpu.1 ERCC5_uc010tjb.... Hybrid_Cap... view
ETV1 7 14028708 14028708 SNU182_LIVER 37 5'UTR Del A - rs77190713 uc011jxq.1 ETV1_uc011jxn.1... Hybrid_Cap...
FGFR1OP 6 167453519 167453520 SNU182_LIVER 37 3'UTR Ins - T rs115519488 uc003qvj.2 CCR6_uc003qvl.2... Hybrid_Cap...
FGFR3 4 1809128 1809129 SNU182_LIVER 37 3'UTR Del GT - uc003gdu.2 FGFR3_uc003gdr.... Hybrid_Cap...
FGFR4 5 176519900 176519900 SNU182_LIVER 37 Intron SNP C A uc003mfl.2 FGFR4_uc003mfm.... Hybrid_Cap... view
FLCN 17 17116791 17116791 SNU182_LIVER 37 3'UTR SNP T C uc002gra.3 PLD6_uc010cpn.2... Hybrid_Cap... view
FLI1 11 128638217 128638217 SNU182_LIVER 37 Intron Del G - uc010sbu.1 FLI1_uc010sbt.1... Hybrid_Cap...
FLT1 p.E201D 13 29008268 29008268 SNU182_LIVER 37 Missense_Mutation SNP T A uc001usb.3 FLT1_uc010aar.1... Hybrid_Cap... view
FN1 2 216244182 216244185 SNU182_LIVER 37 Intron Del GTAC - uc002vfa.2 FN1_uc002vfb.2_... Hybrid_Cap...
GNAS p.R844S 20 57484420 57484420 SNU182_LIVER 37 Missense_Mutation SNP C A rs11554273 uc002xzw.2 GNAS_uc002xzt.2... Hybrid_Cap... view
GPR112 p.D2657del X 135474445 135474447 SNU182_LIVER 37 In_Frame_Del Del GAT - rs3030295 uc004ezu.1 GPR112_uc010nsb... Hybrid_Cap...
GRIA3 X 122318386 122318387 SNU182_LIVER 37 Splice_Site_Ins Ins - G rs66632982 uc004etq.3 GRIA3_uc004etr.... Hybrid_Cap...
HERC2 p.M2777V 15 28437229 28437229 SNU182_LIVER 37 Missense_Mutation SNP T C uc001zbj.2 HERC2_uc001zbk.... Hybrid_Cap... view
HNF1A 12 121434630 121434631 SNU182_LIVER 37 Intron Ins - TCATTCAT rs75100977 uc010szn.1 HNF1A_uc001tze.... Hybrid_Cap...
HSP90B1 p.E791del 12 104341188 104341190 SNU182_LIVER 37 In_Frame_Del Del GAA - rs117491163 uc001tkb.1 HSP90B1_uc010sw... Hybrid_Cap...
ILK 11 6630029 6630029 SNU182_LIVER 37 Intron Del C - uc001mee.2 ILK_uc001mef.2_... Hybrid_Cap...
INSR p.P269L 19 7184495 7184495 SNU182_LIVER 37 Missense_Mutation SNP G A uc002mgd.1 INSR_uc002mge.1... Hybrid_Cap... view
ITGB4 p.T1637A 17 73752796 73752796 SNU182_LIVER 37 Missense_Mutation SNP A G uc002jpg.2 ITGB4_uc002jph.... Hybrid_Cap... view
LRP1B p.Y3757N 2 141115674 141115674 SNU182_LIVER 37 Missense_Mutation SNP A T uc002tvj.1 Hybrid_Cap... view
MAML2 p.604_607QQQQ>Q 11 95825375 95825383 SNU182_LIVER 37 In_Frame_Del Del TGCTG... - rs113349418 uc001pfw.1 Hybrid_Cap...
MAML3 p.Q767_splice 4 140651585 140651587 SNU182_LIVER 37 Splice_Site_Del Del CTG - uc003ihz.1 MGST2_uc010ioi.... Hybrid_Cap...
MAP3K14 p.R218_splice 17 43364293 43364294 SNU182_LIVER 37 Splice_Site_Ins Ins - G rs66766023 uc002iiw.1 MAP3K14_uc010da... Hybrid_Cap...
MAP3K14 p.E632D 17 43347856 43347856 SNU182_LIVER 37 Missense_Mutation SNP C G uc002iiw.1 MAP3K14_uc002ii... Hybrid_Cap... view
MDM2 p.D245H 12 69229657 69229657 SNU182_LIVER 37 Missense_Mutation SNP G C uc001sui.2 MDM2_uc009zri.2... Hybrid_Cap... view
MECOM 3 169381200 169381201 SNU182_LIVER 37 5'UTR Ins - T uc011bpj.1 MECOM_uc011bpk.... Hybrid_Cap...
MYH1 p.F247_splice 17 10417137 10417137 SNU182_LIVER 37 Splice_Site_SNP SNP C T uc002gmo.2 Hybrid_Cap... view
MYLK p.E1066del 3 123419117 123419119 SNU182_LIVER 37 In_Frame_Del Del TTC - rs72491150 uc003ego.2 MYLK_uc011bjw.1... Hybrid_Cap...
MYLK p.R206H 3 123456362 123456362 SNU182_LIVER 37 Missense_Mutation SNP C T uc003ego.2 MYLK_uc011bjw.1... Hybrid_Cap... view
MYLK3 p.D435H 16 46766279 46766279 SNU182_LIVER 37 Missense_Mutation SNP C G uc002eei.3 MYLK3_uc010vge.... Hybrid_Cap... view
MYO3B p.H316L 2 171225863 171225863 SNU182_LIVER 37 Missense_Mutation SNP A T rs55633190 uc002ufy.2 MYO3B_uc002ufv.... Hybrid_Cap... view
MYST3 p.E1109del 8 41794797 41794799 SNU182_LIVER 37 In_Frame_Del Del TCT - uc010lxb.2 MYST3_uc010lxc.... Hybrid_Cap...
NCAM1 11 112832307 112832308 SNU182_LIVER 37 5'UTR Ins - A rs117108942 uc009yyq.1 NCAM1_uc001pno.... Hybrid_Cap...
NCAM1 11 112832340 112832340 SNU182_LIVER 37 5'UTR Del C - uc009yyq.1 NCAM1_uc001pno.... Hybrid_Cap...
NEDD9 p.V32I 6 11213879 11213879 SNU182_LIVER 37 Missense_Mutation SNP C T uc003mzv.2 NEDD9_uc010joz.... Hybrid_Cap... view
NEK3 p.K313_splice 13 52718050 52718051 SNU182_LIVER 37 Splice_Site_Ins Ins - T rs72514762 uc001vgh.2 NEK3_uc001vgg.2... Hybrid_Cap...
NFIA 1 61921185 61921186 SNU182_LIVER 37 3'UTR Ins - T rs57270124;rs76131997 uc010oos.1 NFIA_uc001czy.2... Hybrid_Cap...
NFKB1 p.D917_splice 4 103534740 103534741 SNU182_LIVER 37 Splice_Site_Ins Ins - A rs35795162 uc011cep.1 NFKB1_uc011ceq.... Hybrid_Cap...
NOS2 p.T95A 17 26115870 26115870 SNU182_LIVER 37 Missense_Mutation SNP T C uc002gzu.2 NOS2_uc010crh.1... Hybrid_Cap... view
NPM1 5 170837734 170837734 SNU182_LIVER 37 3'UTR Del T - uc011dex.1 NPM1_uc003mbi.2... Hybrid_Cap...
NPR1 1 153665919 153665920 SNU182_LIVER 37 3'UTR Ins - C rs66682713 uc001fcs.3 NPR1_uc010pdz.1... Hybrid_Cap...
NR1H2 p.176_177insQ 19 50881820 50881821 SNU182_LIVER 37 In_Frame_Ins Ins - AAC rs66783852;rs112359270 uc010enw.2 NR1H2_uc002prv.... Hybrid_Cap...
NUP214 9 134067556 134067557 SNU182_LIVER 37 Intron Ins - T rs66652901 uc004cag.2 NUP214_uc004cah... Hybrid_Cap...
OBSCN p.R4668Q 1 228505746 228505746 SNU182_LIVER 37 Missense_Mutation SNP G A uc009xez.1 OBSCN_uc001hsn.... Hybrid_Cap... view
PAX3 2 223158653 223158653 SNU182_LIVER 37 Intron Del T - rs112753212 uc002vmt.1 PAX3_uc002vmy.1... Hybrid_Cap...
PGR 11 100933598 100933599 SNU182_LIVER 37 Intron Ins - AATGA rs35148438 uc001pgh.2 PGR_uc001pgg.2_... Hybrid_Cap...
PIK3R4 p.R1033S 3 130409498 130409498 SNU182_LIVER 37 Missense_Mutation SNP T A uc003enj.2 Hybrid_Cap... view
PPARGC1A p.T707A 4 23803869 23803869 SNU182_LIVER 37 Missense_Mutation SNP T C uc003gqs.2 PPARGC1A_uc003g... Hybrid_Cap... view
PRAME p.P368R 22 22890916 22890916 SNU182_LIVER 37 Missense_Mutation SNP G C uc002zwf.2 LOC96610_uc011a... Hybrid_Cap... view
PRKCB 16 24231488 24231488 SNU182_LIVER 37 3'UTR SNP A G uc002dme.2 PRKCB_uc002dmd.... Hybrid_Cap... view
PRKDC p.L1244fs 8 48805816 48805817 SNU182_LIVER 37 Frame_Shift_Ins Ins - G rs67588121 uc003xqi.2 PRKDC_uc003xqj.... Hybrid_Cap...
PTEN 10 89624079 89624079 SNU182_LIVER 37 5'UTR SNP G C uc001kfb.2 KILLIN_uc009xti... Hybrid_Cap... view
RBPJ 4 26431822 26431822 SNU182_LIVER 37 Intron Del A - rs76214390 uc003grx.1 RBPJ_uc003gry.1... Hybrid_Cap...
RECQL4 p.R766fs 8 145738768 145738768 SNU182_LIVER 37 Frame_Shift_Del Del G - uc003zdj.2 Hybrid_Cap...
ROS1 p.Q2283K 6 117609852 117609852 SNU182_LIVER 37 Missense_Mutation SNP G T uc003pxp.1 ROS1_uc011ebi.1... Hybrid_Cap... view
RPS6KA5 14 91360733 91360734 SNU182_LIVER 37 Intron Ins - T rs77438853 uc001xys.2 RPS6KA5_uc010tw... Hybrid_Cap...
RUNX1 21 36421366 36421366 SNU182_LIVER 37 Intron SNP T G uc010gmu.2 RUNX1_uc002yut.... Hybrid_Cap... view
SLC6A8 X 152957656 152957657 SNU182_LIVER 37 Intron Ins - A uc004fib.3 SLC6A8_uc004fic... Hybrid_Cap...
SOS1 p.R1041H 2 39222488 39222488 SNU182_LIVER 37 Missense_Mutation SNP C T uc002rrk.3 SOS1_uc002rrj.3... Hybrid_Cap... view
SPTAN1 9 131390236 131390239 SNU182_LIVER 37 Intron Del CTTC - uc004bvm.3 SPTAN1_uc004bvl... Hybrid_Cap...
STAR 8 38003643 38003643 SNU182_LIVER 37 Intron SNP T A uc003xkv.1 STAR_uc010lwc.1... Hybrid_Cap... view
STK31 7 23872024 23872025 SNU182_LIVER 37 3'UTR Ins - TTTG rs66787534 uc003sws.3 STK31_uc003swt.... Hybrid_Cap...
STRADA 17 61781331 61781332 SNU182_LIVER 37 Intron Ins - AGAACC rs66701913 uc002jbm.2 STRADA_uc002jbn... Hybrid_Cap...
TEC 4 48139307 48139310 SNU182_LIVER 37 3'UTR Del TTAT - rs79098351 uc003gxz.2 Hybrid_Cap...
TG p.C898S 8 133900745 133900745 SNU182_LIVER 37 Missense_Mutation SNP G C uc003ytw.2 Hybrid_Cap... view
TLK1 2 171850178 171850179 SNU182_LIVER 37 3'UTR Ins - AA rs71008739 uc002ugo.2 TLK1_uc002ugn.2... Hybrid_Cap...
TLK1 2 171850201 171850201 SNU182_LIVER 37 3'UTR Del G - rs78172041 uc002ugo.2 TLK1_uc002ugn.2... Hybrid_Cap...
TP53 p.S215I 17 7578205 7578205 SNU182_LIVER 37 Missense_Mutation SNP C A uc002gim.2 TP53_uc002gig.1... Hybrid_Cap... view
TP63 3 189507518 189507519 SNU182_LIVER 37 Intron Ins - AGAG rs62702062;rs79714037 uc003fry.2 TP63_uc003frx.2... Hybrid_Cap...
TRPM7 p.T842M 15 50901833 50901833 SNU182_LIVER 37 Missense_Mutation SNP G A uc001zyt.3 TRPM7_uc010bew.... Hybrid_Cap... view
TYK2 p.A931D 19 10464834 10464834 SNU182_LIVER 37 Missense_Mutation SNP G T rs56255228 uc002moc.3 TYK2_uc010dxe.2... Hybrid_Cap... view
UNC13C p.T2058M 15 54914591 54914591 SNU182_LIVER 37 Missense_Mutation SNP C T uc002ack.2 UNC13C_uc002acm... Hybrid_Cap... view
VEGFC p.S419_splice 4 177605082 177605084 SNU182_LIVER 37 Splice_Site_Del Del TCA - uc003ius.1 Hybrid_Cap...
ZNF217 p.P823L 20 52192835 52192835 SNU182_LIVER 37 Missense_Mutation SNP G A uc002xwq.3 ZNF217_uc010gij... Hybrid_Cap... view
ZNF521 p.T357M 18 22806812 22806812 SNU182_LIVER 37 Missense_Mutation SNP G A uc002kvk.2 ZNF521_uc010xbe... Hybrid_Cap... view