Annotation Summary for Cell Line: ST486  

Cell line primary name: ST486
Cell line aliases:
Gender: F
Site Primary: haematopoietic_and_lymphoid_tissue
Histology: lymphoid_neoplasm
Hist Subtype1: Burkitt_lymphoma
Notes:
Source: ATCC
Expression arrays: MAKER_p_NCLE_RNA7_HG-U133_Plus_2_H08_454720
SNP arrays: LOBBY_p_NCLE_DNAAffy6_GenomeWideSNP_6_E01_437244
Oncomap: yes
Hybrid Capture Sequencing: yes


Mutations in ST486

GeneProtein
Change
ChrStartEnd SampleNCBI
Build
Variant
Classification
Variant TypeReference
Allele
Tumor
Allele 1
dbSNP IDAnnotation
Transcript
Other
Transcripts
Method View
Reads
Mutation
Assessor
AAK1 p.541_542QQ>Q 2 69741754 69741756 ST486_HAEMATOPO... 37 In_Frame_Del Del TGT - rs55712143 uc002sfp.2 AAK1_uc010fdk.2... Hybrid_Cap...
ADAM17 2 9630245 9630245 ST486_HAEMATOPO... 37 3'UTR Del T - uc002qzu.2 IAH1_uc010yiz.1... Hybrid_Cap...
ADAM28 p.V16_splice 8 24151710 24151710 ST486_HAEMATOPO... 37 Splice_Site_SNP SNP T C uc003xdy.2 ADAM28_uc003xdx... Hybrid_Cap... view
ADAM28 8 24211994 24211997 ST486_HAEMATOPO... 37 3'UTR Del CTAT - rs10610134 uc003xdy.2 ADAM28_uc011laa... Hybrid_Cap...
ADAM32 8 38965252 38965252 ST486_HAEMATOPO... 37 5'UTR SNP C A uc003xmt.3 ADAM32_uc011lch... Hybrid_Cap... view
ADAMTS20 p.S1428L 12 43819318 43819318 ST486_HAEMATOPO... 37 Missense_Mutation SNP G A uc010skx.1 ADAMTS20_uc001r... Hybrid_Cap... view
AKAP12 p.1531_1532insE 6 151674116 151674117 ST486_HAEMATOPO... 37 In_Frame_Ins Ins - GAG rs34737819 uc011eep.1 AKAP12_uc003qoe... Hybrid_Cap...
AKAP9 p.1335_1336insQ 7 91652178 91652179 ST486_HAEMATOPO... 37 In_Frame_Ins Ins - AAC rs34756483 uc003ulg.2 AKAP9_uc003ule.... Hybrid_Cap...
ALPK2 p.S1310R 18 56203489 56203489 ST486_HAEMATOPO... 37 Missense_Mutation SNP G T uc002lhj.3 ALPK2_uc002lhk.... Hybrid_Cap... view
BCR 22 23631813 23631814 ST486_HAEMATOPO... 37 Intron Ins - C rs66503844 uc002zww.2 BCR_uc002zwx.2_... Hybrid_Cap...
BCR 22 23632777 23632778 ST486_HAEMATOPO... 37 Intron Ins - T uc002zww.2 BCR_uc002zwx.2_... Hybrid_Cap...
C15ORF2 p.A467S 15 24922413 24922413 ST486_HAEMATOPO... 37 Missense_Mutation SNP G T uc001ywo.2 Hybrid_Cap... view
CABC1 1 227171585 227171585 ST486_HAEMATOPO... 37 Intron Del T - uc001hqm.1 CABC1_uc001hqn.... Hybrid_Cap...
CABC1 1 227171736 227171737 ST486_HAEMATOPO... 37 Intron Ins - T rs1574184 uc001hqm.1 CABC1_uc001hqn.... Hybrid_Cap...
CCND3 p.P284L 6 41903706 41903706 ST486_HAEMATOPO... 37 Missense_Mutation SNP G A uc003orn.2 CCND3_uc003orp.... Hybrid_Cap... view
CDK18 p.R40W 1 205492413 205492413 ST486_HAEMATOPO... 37 Missense_Mutation SNP C T uc001hcr.2 CDK18_uc009xbk.... Hybrid_Cap... view
CHD1 p.P1684del 5 98192165 98192167 ST486_HAEMATOPO... 37 In_Frame_Del Del AGG - rs79267787;rs61749618 uc003knf.2 CHD1_uc010jbn.2... Hybrid_Cap...
CHD9 p.E686* 16 53261320 53261320 ST486_HAEMATOPO... 37 Nonsense_Mutation SNP G T uc002ehb.2 CHD9_uc002egy.2... Hybrid_Cap... view
CHN1 p.A434V 2 175664923 175664923 ST486_HAEMATOPO... 37 Missense_Mutation SNP G A uc002uji.2 CHN1_uc010zeq.1... Hybrid_Cap... view
CLTCL1 p.V1201_splice 22 19189003 19189004 ST486_HAEMATOPO... 37 Splice_Site_Ins Ins - C rs11386977 uc002zpb.2 CLTCL1_uc011agv... Hybrid_Cap...
CREB3L2 p.T100del 7 137612914 137612916 ST486_HAEMATOPO... 37 In_Frame_Del Del TGG - uc003vtw.2 CREB3L2_uc003vt... Hybrid_Cap...
CXCR4 p.F91C 2 136873238 136873238 ST486_HAEMATOPO... 37 Missense_Mutation SNP A C uc002tuy.2 CXCR4_uc010fnk.... Hybrid_Cap... view
DACH1 p.S148G 13 72440460 72440460 ST486_HAEMATOPO... 37 Missense_Mutation SNP T C uc010thn.1 DACH1_uc010tho.... Hybrid_Cap... view
DST p.E5070K 6 56342253 56342253 ST486_HAEMATOPO... 37 Missense_Mutation SNP C T uc003pdf.2 DST_uc003pcz.3_... Hybrid_Cap... view
DYRK1A 21 38884966 38884967 ST486_HAEMATOPO... 37 3'UTR Ins - T rs72430212 uc002ywk.2 DYRK1A_uc002ywi... Hybrid_Cap...
EDN1 6 12290729 12290729 ST486_HAEMATOPO... 37 5'UTR Del A - uc003nae.3 EDN1_uc010jpb.2... Hybrid_Cap...
EPHA5 p.N496K 4 66286198 66286198 ST486_HAEMATOPO... 37 Missense_Mutation SNP A C uc011cah.1 EPHA5_uc003hcx.... Hybrid_Cap... view
EPHA8 1 22928305 22928305 ST486_HAEMATOPO... 37 3'UTR SNP G T uc001bfx.1 Hybrid_Cap... view
ERBB4 2 212248283 212248283 ST486_HAEMATOPO... 37 3'UTR SNP G A uc002veg.1 ERBB4_uc002veh.... Hybrid_Cap... view
ERC1 p.S449L 12 1221409 1221409 ST486_HAEMATOPO... 37 Missense_Mutation SNP C T uc001qjb.2 ERC1_uc001qiz.2... Hybrid_Cap... view
ERCC2 19 45854768 45854768 ST486_HAEMATOPO... 37 3'UTR Del G - uc002pbj.2 KLC3_uc002pbf.1... Hybrid_Cap...
ETV1 7 14028708 14028708 ST486_HAEMATOPO... 37 5'UTR Del A - rs77190713 uc011jxq.1 ETV1_uc011jxn.1... Hybrid_Cap...
FGFR1OP 6 167453519 167453520 ST486_HAEMATOPO... 37 3'UTR Ins - T rs115519488 uc003qvj.2 CCR6_uc003qvl.2... Hybrid_Cap...
FGFR3 4 1809128 1809129 ST486_HAEMATOPO... 37 3'UTR Del GT - uc003gdu.2 FGFR3_uc003gdr.... Hybrid_Cap...
FLI1 11 128638217 128638217 ST486_HAEMATOPO... 37 Intron Del G - uc010sbu.1 FLI1_uc010sbt.1... Hybrid_Cap...
FURIN p.H145Y 15 91420186 91420186 ST486_HAEMATOPO... 37 Missense_Mutation SNP C T uc002bpu.1 Hybrid_Cap... view
GLI1 p.GAPSV26del 12 57857549 57857563 ST486_HAEMATOPO... 37 In_Frame_Del Del GGGGG... - uc001snx.2 GLI1_uc009zpp.2... Hybrid_Cap...
GRIA3 X 122318386 122318387 ST486_HAEMATOPO... 37 Splice_Site_Ins Ins - G rs66632982 uc004etq.3 GRIA3_uc004etr.... Hybrid_Cap...
GUCY2C 12 14827464 14827466 ST486_HAEMATOPO... 37 Intron Del ATC - rs72525754;rs3083879 uc001rcd.2 GUCY2C_uc009zhz... Hybrid_Cap...
ILK 11 6630029 6630029 ST486_HAEMATOPO... 37 Intron Del C - uc001mee.2 ILK_uc001mef.2_... Hybrid_Cap...
INHBA 7 41729121 41729122 ST486_HAEMATOPO... 37 3'UTR Ins - T uc003thq.2 INHBA_uc003thr.... Hybrid_Cap...
ITPR2 p.R470_splice 12 26834804 26834805 ST486_HAEMATOPO... 37 Splice_Site_Ins Ins - ACTC rs66696203;rs59199365 uc001rhg.2 Hybrid_Cap...
LAMA1 p.E2462D 18 6962010 6962010 ST486_HAEMATOPO... 37 Missense_Mutation SNP T A uc002knm.2 LAMA1_uc002knl.... Hybrid_Cap... view
LCP1 13 46701580 46701580 ST486_HAEMATOPO... 37 3'UTR SNP G T uc001vaz.3 LCP1_uc010ack.2... Hybrid_Cap... view
LRP2 2 170097394 170097394 ST486_HAEMATOPO... 37 Intron SNP A C uc002ues.2 LRP2_uc010zdf.1... Hybrid_Cap... view
LSP1 p.Q361K 11 1905791 1905791 ST486_HAEMATOPO... 37 Missense_Mutation SNP C A uc001luj.2 LSP1_uc001lui.2... Hybrid_Cap... view
MAF 16 79628537 79628537 ST486_HAEMATOPO... 37 Intron Del T - uc002ffm.2 MAF_uc002ffn.2_... Hybrid_Cap...
MAML3 p.Q767_splice 4 140651585 140651587 ST486_HAEMATOPO... 37 Splice_Site_Del Del CTG - uc003ihz.1 MGST2_uc010ioi.... Hybrid_Cap...
MAP3K1 p.T949del 5 56177849 56177851 ST486_HAEMATOPO... 37 In_Frame_Del Del CAA - uc003jqw.3 Hybrid_Cap...
MAP3K14 p.R218_splice 17 43364293 43364294 ST486_HAEMATOPO... 37 Splice_Site_Ins Ins - G rs66766023 uc002iiw.1 MAP3K14_uc010da... Hybrid_Cap...
MAP3K4 p.A1199del 6 161519351 161519353 ST486_HAEMATOPO... 37 In_Frame_Del Del CTG - uc003qtn.2 MAP3K4_uc010kkc... Hybrid_Cap...
MAP4K5 p.R172* 14 50941823 50941823 ST486_HAEMATOPO... 37 Nonsense_Mutation SNP G A uc001wya.2 MAP4K5_uc001wyb... Hybrid_Cap... view
MAPKAPK3 3 50685575 50685575 ST486_HAEMATOPO... 37 3'UTR Del A - rs76026164 uc003day.1 MAPKAPK3_uc003d... Hybrid_Cap...
MAPKBP1 15 42111746 42111746 ST486_HAEMATOPO... 37 Intron Del G - uc001zok.3 MAPKBP1_uc001zo... Hybrid_Cap...
MTOR p.L2427R 1 11174395 11174395 ST486_HAEMATOPO... 37 Missense_Mutation SNP A C uc001asd.2 MTOR_uc001asc.2... Hybrid_Cap... view
MYC p.Q51L 8 128750615 128750615 ST486_HAEMATOPO... 37 Missense_Mutation SNP A T uc003ysi.2 MYC_uc003ysh.1_... Hybrid_Cap... view
MYC p.P72T 8 128750677 128750677 ST486_HAEMATOPO... 37 Missense_Mutation SNP C A rs28933407 uc003ysi.2 MYC_uc003ysh.1_... Hybrid_Cap... view
MYC p.T110P 8 128750791 128750791 ST486_HAEMATOPO... 37 Missense_Mutation SNP A C uc003ysi.2 MYC_uc003ysh.1_... Hybrid_Cap... view
MYC p.A198V 8 128751056 128751056 ST486_HAEMATOPO... 37 Missense_Mutation SNP C T uc003ysi.2 Hybrid_Cap... view
NCAM1 11 112832307 112832308 ST486_HAEMATOPO... 37 5'UTR Ins - A rs117108942 uc009yyq.1 NCAM1_uc001pno.... Hybrid_Cap...
NCAM1 11 112832340 112832340 ST486_HAEMATOPO... 37 5'UTR Del C - uc009yyq.1 NCAM1_uc001pno.... Hybrid_Cap...
NEK3 p.K313_splice 13 52718050 52718051 ST486_HAEMATOPO... 37 Splice_Site_Ins Ins - T rs72514762 uc001vgh.2 NEK3_uc001vgg.2... Hybrid_Cap...
NFATC1 p.Q391* 18 77171446 77171446 ST486_HAEMATOPO... 37 Nonsense_Mutation SNP C T uc010xfg.1 NFATC1_uc002lnc... Hybrid_Cap... view
NFATC1 p.I460L 18 77193730 77193730 ST486_HAEMATOPO... 37 Missense_Mutation SNP A C uc010xfg.1 NFATC1_uc002lnc... Hybrid_Cap... view
NFIA 1 61921185 61921186 ST486_HAEMATOPO... 37 3'UTR Ins - T rs57270124;rs76131997 uc010oos.1 NFIA_uc001czy.2... Hybrid_Cap...
NOTCH4 p.15_16LL>L 6 32191659 32191661 ST486_HAEMATOPO... 37 In_Frame_Del Del AGC - uc003obb.2 NOTCH4_uc011dpu... Hybrid_Cap...
NR1H2 p.176_177insQ 19 50881820 50881821 ST486_HAEMATOPO... 37 In_Frame_Ins Ins - AAC rs66783852;rs112359270 uc010enw.2 NR1H2_uc002prv.... Hybrid_Cap...
PAX3 2 223158653 223158653 ST486_HAEMATOPO... 37 Intron Del T - rs112753212 uc002vmt.1 PAX3_uc002vmy.1... Hybrid_Cap...
PIK3C2G p.P129del 12 18435399 18435401 ST486_HAEMATOPO... 37 In_Frame_Del Del CCC - uc010sib.1 PIK3C2G_uc001rd... Hybrid_Cap...
PMAIP1 18 57570188 57570188 ST486_HAEMATOPO... 37 3'UTR SNP G A uc002lic.2 PMAIP1_uc002lid... Hybrid_Cap... view
PRKDC p.L1244fs 8 48805816 48805817 ST486_HAEMATOPO... 37 Frame_Shift_Ins Ins - G rs67588121 uc003xqi.2 PRKDC_uc003xqj.... Hybrid_Cap...
PTPN1 20 49199355 49199356 ST486_HAEMATOPO... 37 3'UTR Ins - G rs16989673 uc002xvl.2 PTPN1_uc010zys.... Hybrid_Cap...
PTPRD p.L1500V 9 8376615 8376615 ST486_HAEMATOPO... 37 Missense_Mutation SNP G C uc003zkk.2 PTPRD_uc003zkp.... Hybrid_Cap... view
RBPJ p.A349V 4 26431638 26431638 ST486_HAEMATOPO... 37 Missense_Mutation SNP C T uc003grx.1 RBPJ_uc003gry.1... Hybrid_Cap... view
RICTOR p.D1251Y 5 38950199 38950199 ST486_HAEMATOPO... 37 Missense_Mutation SNP C A uc003jlo.2 RICTOR_uc003jlp... Hybrid_Cap... view
TEC 4 48139307 48139310 ST486_HAEMATOPO... 37 3'UTR Del TTAT - rs79098351 uc003gxz.2 Hybrid_Cap...
TP53 p.N239D 17 7577566 7577566 ST486_HAEMATOPO... 37 Missense_Mutation SNP T C uc002gim.2 TP53_uc002gig.1... Hybrid_Cap... view
TP53 p.R158H 17 7578457 7578457 ST486_HAEMATOPO... 37 Missense_Mutation SNP C T uc002gim.2 TP53_uc002gig.1... Hybrid_Cap... view
TP63 3 189507518 189507519 ST486_HAEMATOPO... 37 Intron Ins - AGAG rs62702062;rs79714037 uc003fry.2 TP63_uc003frx.2... Hybrid_Cap...
TSC2 p.A357V 16 2110765 2110765 ST486_HAEMATOPO... 37 Missense_Mutation SNP C T uc002con.2 TSC2_uc010bsd.2... Hybrid_Cap... view
TSC2 p.Y1760C 16 2138466 2138466 ST486_HAEMATOPO... 37 Missense_Mutation SNP A G uc002con.2 TSC2_uc010bsd.2... Hybrid_Cap... view
VEGFC p.S419_splice 4 177605082 177605084 ST486_HAEMATOPO... 37 Splice_Site_Del Del TCA - uc003ius.1 Hybrid_Cap...