Annotation Summary for Cell Line: SU-DHL-10  

Cell line primary name: SU-DHL-10
Cell line aliases:
Gender: M
Site Primary: haematopoietic_and_lymphoid_tissue
Histology: lymphoid_neoplasm
Hist Subtype1: diffuse_large_B_cell_lymphoma
Notes:
Source: DSMZ
Expression arrays: SILOS_p_NCLE_RNA9_HG-U133_Plus_2_E03_523566
SNP arrays: AWASH_p_NCLE_DNAAffy10_GenomeWideSNP_6_B10_542972
Oncomap: yes
Hybrid Capture Sequencing: yes


Mutations in SU-DHL-10

GeneProtein
Change
ChrStartEnd SampleNCBI
Build
Variant
Classification
Variant TypeReference
Allele
Tumor
Allele 1
dbSNP IDAnnotation
Transcript
Other
Transcripts
Method View
Reads
Mutation
Assessor
ABL2 1 179086419 179086420 SUDHL10_HAEMATO... 37 Intron Ins - A rs72207641 uc001gmj.3 ABL2_uc010pnf.1... Hybrid_Cap...
ADAM17 2 9630245 9630245 SUDHL10_HAEMATO... 37 3'UTR Del T - uc002qzu.2 IAH1_uc010yiz.1... Hybrid_Cap...
ADAM28 8 24211994 24211997 SUDHL10_HAEMATO... 37 3'UTR Del CTAT - rs10610134 uc003xdy.2 ADAM28_uc011laa... Hybrid_Cap...
AKAP12 p.1531_1532insE 6 151674116 151674117 SUDHL10_HAEMATO... 37 In_Frame_Ins Ins - GAG rs34737819 uc011eep.1 AKAP12_uc003qoe... Hybrid_Cap...
AKAP9 p.1335_1336insQ 7 91652178 91652179 SUDHL10_HAEMATO... 37 In_Frame_Ins Ins - AAC rs34756483 uc003ulg.2 AKAP9_uc003ule.... Hybrid_Cap...
ALPK1 4 113347609 113347610 SUDHL10_HAEMATO... 37 Intron Ins - T rs68137453 uc003iap.3 ALPK1_uc003ian.... Hybrid_Cap...
BCL11A p.495_498EEEE>E 2 60688554 60688562 SUDHL10_HAEMATO... 37 In_Frame_Del Del TCCTC... - uc002sae.1 BCL11A_uc002sab... Hybrid_Cap...
CACNB2 10 18828721 18828722 SUDHL10_HAEMATO... 37 3'UTR Ins - AA rs3841459 uc001ipr.2 CACNB2_uc009xjz... Hybrid_Cap...
CASP8 p.L533R 2 202151298 202151298 SUDHL10_HAEMATO... 37 Missense_Mutation SNP T G uc002uxt.1 CASP8_uc002uxp.... Hybrid_Cap... view
CCND3 p.I290T 6 41903688 41903688 SUDHL10_HAEMATO... 37 Missense_Mutation SNP A G uc003orn.2 CCND3_uc003orp.... Hybrid_Cap... view
CDK10 p.L42P 16 89755697 89755697 SUDHL10_HAEMATO... 37 Missense_Mutation SNP T C uc010cio.2 CDK10_uc002foa.... Hybrid_Cap... view
CDK18 1 205495890 205495891 SUDHL10_HAEMATO... 37 Intron Del CT - uc001hcr.2 CDK18_uc010pri.... Hybrid_Cap...
CHD8 p.R1216C 14 21868659 21868659 SUDHL10_HAEMATO... 37 Missense_Mutation SNP G A uc001was.1 CHD8_uc001war.1... Hybrid_Cap... view
CLTCL1 p.V1201_splice 22 19189003 19189004 SUDHL10_HAEMATO... 37 Splice_Site_Ins Ins - C rs11386977 uc002zpb.2 CLTCL1_uc011agv... Hybrid_Cap...
COL18A1 p.V1676I 21 46931121 46931121 SUDHL10_HAEMATO... 37 Missense_Mutation SNP G A uc011afs.1 COL18A1_uc002zh... Hybrid_Cap... view
CREB3L2 p.T100del 7 137612914 137612916 SUDHL10_HAEMATO... 37 In_Frame_Del Del TGG - uc003vtw.2 CREB3L2_uc003vt... Hybrid_Cap...
CSF1R p.T600M 5 149441113 149441113 SUDHL10_HAEMATO... 37 Missense_Mutation SNP G A uc003lrl.2 CSF1R_uc011dcd.... Hybrid_Cap... view
CTBP2 p.K974fs 10 126678123 126678123 SUDHL10_HAEMATO... 37 Frame_Shift_Del Del T - uc001lie.3 CTBP2_uc009yak.... Hybrid_Cap...
CXCL12 10 44873992 44873993 SUDHL10_HAEMATO... 37 Intron Ins - CT rs117617571 uc001jbh.2 CXCL12_uc001jbf... Hybrid_Cap...
EGF 4 110834390 110834390 SUDHL10_HAEMATO... 37 5'UTR SNP G A rs11568848 uc003hzy.3 EGF_uc011cfu.1_... Hybrid_Cap... view
EIF2AK4 15 40284555 40284555 SUDHL10_HAEMATO... 37 Intron SNP C T uc001zkm.1 EIF2AK4_uc010bb... Hybrid_Cap... view
EIF4E 4 99808137 99808141 SUDHL10_HAEMATO... 37 Intron Del TTAAA - uc011ceb.1 EIF4E_uc011cea.... Hybrid_Cap...
EP300 p.L415P 22 41525969 41525969 SUDHL10_HAEMATO... 37 Missense_Mutation SNP T C uc003azl.3 Hybrid_Cap... view
EP300 p.R1391_splice 22 41564873 41564873 SUDHL10_HAEMATO... 37 Splice_Site_SNP SNP T A uc003azl.3 Hybrid_Cap... view
EPHA5 4 66189753 66189754 SUDHL10_HAEMATO... 37 3'UTR Ins - T rs67487372 uc011cah.1 EPHA5_uc003hcx.... Hybrid_Cap...
EPHA6 3 97367230 97367231 SUDHL10_HAEMATO... 37 Intron Ins - A rs115253553 uc010how.1 EPHA6_uc003drs.... Hybrid_Cap...
ETV1 7 14028708 14028708 SUDHL10_HAEMATO... 37 5'UTR Del A - rs77190713 uc011jxq.1 ETV1_uc011jxn.1... Hybrid_Cap...
FAM132A 1 1177919 1177919 SUDHL10_HAEMATO... 37 3'UTR Del T - uc001adl.1 Hybrid_Cap...
FLI1 11 128638217 128638217 SUDHL10_HAEMATO... 37 Intron Del G - uc010sbu.1 FLI1_uc010sbt.1... Hybrid_Cap...
FLT4 5 180035183 180035185 SUDHL10_HAEMATO... 37 Intron Del AGT - uc003mlz.3 FLT4_uc003mma.3... Hybrid_Cap...
FN1 p.A2019S 2 216240039 216240039 SUDHL10_HAEMATO... 37 Missense_Mutation SNP C A uc002vfa.2 FN1_uc002vfb.2_... Hybrid_Cap... view
FN1 2 216244182 216244185 SUDHL10_HAEMATO... 37 Intron Del GTAC - uc002vfa.2 FN1_uc002vfb.2_... Hybrid_Cap...
FN1 p.P204fs 2 216295510 216295511 SUDHL10_HAEMATO... 37 Frame_Shift_Ins Ins - GG uc002vfa.2 FN1_uc002vfb.2_... Hybrid_Cap...
GLYATL2 11 58601858 58601858 SUDHL10_HAEMATO... 37 3'UTR Del T - uc001nnd.3 GLYATL2_uc009ym... Hybrid_Cap...
GRIA3 X 122318386 122318387 SUDHL10_HAEMATO... 37 Splice_Site_Ins Ins - G rs66632982 uc004etq.3 GRIA3_uc004etr.... Hybrid_Cap...
GUCY2C 12 14827464 14827466 SUDHL10_HAEMATO... 37 Intron Del ATC - rs72525754;rs3083879 uc001rcd.2 GUCY2C_uc009zhz... Hybrid_Cap...
HNF1A 12 121434630 121434631 SUDHL10_HAEMATO... 37 Intron Ins - TCATTCAT rs75100977 uc010szn.1 HNF1A_uc001tze.... Hybrid_Cap...
ILK 11 6630029 6630029 SUDHL10_HAEMATO... 37 Intron Del C - uc001mee.2 ILK_uc001mef.2_... Hybrid_Cap...
ITPR2 p.R470_splice 12 26834804 26834805 SUDHL10_HAEMATO... 37 Splice_Site_Ins Ins - ACTC rs66696203;rs59199365 uc001rhg.2 Hybrid_Cap...
KLK7 19 51480672 51480675 SUDHL10_HAEMATO... 37 3'UTR Del GGTT - uc002puo.2 KLK7_uc002pup.2... Hybrid_Cap...
KRAS p.I171M 12 25368432 25368432 SUDHL10_HAEMATO... 37 Missense_Mutation SNP G C uc001rgp.1 KRAS_uc001rgq.1... Hybrid_Cap... view
LATS2 p.A678S 13 21557813 21557813 SUDHL10_HAEMATO... 37 Missense_Mutation SNP C A uc009zzs.2 LATS2_uc001unr.... Hybrid_Cap... view
MAF 16 79628537 79628537 SUDHL10_HAEMATO... 37 Intron Del T - uc002ffm.2 MAF_uc002ffn.2_... Hybrid_Cap...
MAML2 p.604_607QQQQ>Q 11 95825375 95825383 SUDHL10_HAEMATO... 37 In_Frame_Del Del TGCTG... - rs113349418 uc001pfw.1 Hybrid_Cap...
MAML3 p.Q767_splice 4 140651585 140651587 SUDHL10_HAEMATO... 37 Splice_Site_Del Del CTG - uc003ihz.1 MGST2_uc010ioi.... Hybrid_Cap...
MAP3K14 p.R218_splice 17 43364293 43364294 SUDHL10_HAEMATO... 37 Splice_Site_Ins Ins - G rs66766023 uc002iiw.1 MAP3K14_uc010da... Hybrid_Cap...
MAPK14 6 36076345 36076354 SUDHL10_HAEMATO... 37 3'UTR Del GTGTG... - rs80147786 uc003olp.2 MAPK14_uc003olq... Hybrid_Cap...
MAPK4 p.P573R 18 48256178 48256178 SUDHL10_HAEMATO... 37 Missense_Mutation SNP C G uc002lev.2 MAPK4_uc010xdm.... Hybrid_Cap... view
MLLT6 17 36881873 36881873 SUDHL10_HAEMATO... 37 3'UTR Del C - uc002hqi.3 MLLT6_uc002hqk.... Hybrid_Cap...
MYC p.P72T 8 128750677 128750677 SUDHL10_HAEMATO... 37 Missense_Mutation SNP C A rs28933407 uc003ysi.2 MYC_uc003ysh.1_... Hybrid_Cap... view
MYLK2 p.G444fs 20 30418850 30418850 SUDHL10_HAEMATO... 37 Frame_Shift_Del Del G - uc002wwq.2 MYLK2_uc002wws.... Hybrid_Cap...
MYST4 p.P1126T 10 76784719 76784719 SUDHL10_HAEMATO... 37 Missense_Mutation SNP C A uc001jwn.1 MYST4_uc001jwo.... Hybrid_Cap... view
MYT1 20 62871868 62871868 SUDHL10_HAEMATO... 37 3'UTR SNP G A uc002yii.2 MYT1_uc002yij.2... Hybrid_Cap... view
NCAM1 11 112832307 112832308 SUDHL10_HAEMATO... 37 5'UTR Ins - A rs117108942 uc009yyq.1 NCAM1_uc001pno.... Hybrid_Cap...
NCAM1 11 112832340 112832340 SUDHL10_HAEMATO... 37 5'UTR Del C - uc009yyq.1 NCAM1_uc001pno.... Hybrid_Cap...
NOS3 p.G345V 7 150696355 150696355 SUDHL10_HAEMATO... 37 Missense_Mutation SNP G T uc003wif.2 NOS3_uc011kuy.1... Hybrid_Cap... view
NOTCH4 p.15_16LL>L 6 32191659 32191661 SUDHL10_HAEMATO... 37 In_Frame_Del Del AGC - uc003obb.2 NOTCH4_uc011dpu... Hybrid_Cap...
NPR1 1 153665919 153665920 SUDHL10_HAEMATO... 37 3'UTR Ins - C rs66682713 uc001fcs.3 NPR1_uc010pdz.1... Hybrid_Cap...
NR1H2 p.176_177insQ 19 50881820 50881821 SUDHL10_HAEMATO... 37 In_Frame_Ins Ins - AAC rs66783852;rs112359270 uc010enw.2 NR1H2_uc002prv.... Hybrid_Cap...
NR3C1 5 142780419 142780419 SUDHL10_HAEMATO... 37 Splice_Site_SNP SNP T A uc003lmy.2 NR3C1_uc003lmz.... Hybrid_Cap... view
NUP214 9 134067556 134067557 SUDHL10_HAEMATO... 37 Intron Ins - T rs66652901 uc004cag.2 NUP214_uc004cah... Hybrid_Cap...
PCDH15 p.P321A 10 55996622 55996622 SUDHL10_HAEMATO... 37 Missense_Mutation SNP G C uc010qhy.1 PCDH15_uc010qhq... Hybrid_Cap... view
PIK3C2A p.F1269L 11 17124253 17124253 SUDHL10_HAEMATO... 37 Missense_Mutation SNP A C uc001mmq.3 PIK3C2A_uc009yg... Hybrid_Cap... view
PIK3C2A p.N316K 11 17190341 17190341 SUDHL10_HAEMATO... 37 Missense_Mutation SNP A T uc001mmq.3 PIK3C2A_uc009yg... Hybrid_Cap... view
PRKCA 17 64298959 64298960 SUDHL10_HAEMATO... 37 5'UTR Ins - G rs71160558 uc002jfp.1 PRKCA_uc002jfo.... Hybrid_Cap...
PRKCD p.D653N 3 53226208 53226208 SUDHL10_HAEMATO... 37 Missense_Mutation SNP G A uc003dgl.2 PRKCD_uc003dgm.... Hybrid_Cap... view
PRKDC p.L1244fs 8 48805816 48805817 SUDHL10_HAEMATO... 37 Frame_Shift_Ins Ins - G rs67588121 uc003xqi.2 PRKDC_uc003xqj.... Hybrid_Cap...
PTCH1 p.V1231A 9 98211463 98211463 SUDHL10_HAEMATO... 37 Missense_Mutation SNP A G uc004avk.3 PTCH1_uc010mrn.... Hybrid_Cap... view
PTEN p.Y68H 10 89685307 89685307 SUDHL10_HAEMATO... 37 Missense_Mutation SNP T C uc001kfb.2 Hybrid_Cap... view
PTEN p.D162H 10 89693000 89693000 SUDHL10_HAEMATO... 37 Missense_Mutation SNP G C uc001kfb.2 Hybrid_Cap... view
PTPRD p.V310F 9 8521310 8521310 SUDHL10_HAEMATO... 37 Missense_Mutation SNP C A uc003zkk.2 PTPRD_uc003zkp.... Hybrid_Cap... view
RECQL4 p.R766fs 8 145738768 145738768 SUDHL10_HAEMATO... 37 Frame_Shift_Del Del G - uc003zdj.2 Hybrid_Cap...
STK25 2 242435659 242435662 SUDHL10_HAEMATO... 37 Intron Del AAGG - rs3215138;rs75497042 uc002wbm.2 STK25_uc002wbk.... Hybrid_Cap...
STK3 p.L159S 8 99719499 99719499 SUDHL10_HAEMATO... 37 Missense_Mutation SNP A G uc003yio.2 STK3_uc003yip.2... Hybrid_Cap... view
STK39 2 168811951 168811951 SUDHL10_HAEMATO... 37 3'UTR SNP G A uc002uea.2 Hybrid_Cap... view
TEC 4 48139307 48139310 SUDHL10_HAEMATO... 37 3'UTR Del TTAT - rs79098351 uc003gxz.2 Hybrid_Cap...
TNNI3K p.D428V 1 74818997 74818997 SUDHL10_HAEMATO... 37 Missense_Mutation SNP A T uc001dge.1 TNNI3K_uc001dgc... Hybrid_Cap... view
TOE1 1 45805816 45805816 SUDHL10_HAEMATO... 37 5'UTR SNP G C rs3219467 uc009vxq.2 MUTYH_uc001cnf.... Hybrid_Cap... view
TP53 p.I332_splice 17 7574034 7574034 SUDHL10_HAEMATO... 37 Splice_Site_SNP SNP C T uc002gim.2 TP53_uc002gig.1... Hybrid_Cap... view
TP63 3 189507518 189507519 SUDHL10_HAEMATO... 37 Intron Ins - AG rs62702062;rs79714037 uc003fry.2 TP63_uc003frx.2... Hybrid_Cap...
VEGFC p.S419_splice 4 177605082 177605084 SUDHL10_HAEMATO... 37 Splice_Site_Del Del TCA - uc003ius.1 Hybrid_Cap...
WEE2 p.E290A 7 141420845 141420845 SUDHL10_HAEMATO... 37 Missense_Mutation SNP A C uc003vwn.2 FLJ40852_uc011k... Hybrid_Cap... view