Annotation Summary for Cell Line: SU-DHL-5  

Cell line primary name: SU-DHL-5
Cell line aliases:
Gender: F
Site Primary: haematopoietic_and_lymphoid_tissue
Histology: lymphoid_neoplasm
Hist Subtype1: diffuse_large_B_cell_lymphoma
Notes:
Source: DSMZ
Expression arrays: WATCH_p_NCLE_RNA8_HG-U133_Plus_2_G02_474760
SNP arrays: CHARY_p_NCLE_DNAAffy9_GenomeWideSNP_6_H05_490430
Oncomap: yes
Hybrid Capture Sequencing: yes


Mutations in SU-DHL-5

GeneProtein
Change
ChrStartEnd SampleNCBI
Build
Variant
Classification
Variant TypeReference
Allele
Tumor
Allele 1
dbSNP IDAnnotation
Transcript
Other
Transcripts
Method View
Reads
Mutation
Assessor
ACACA 17 35766564 35766564 SUDHL5_HAEMATOP... 37 5'UTR Del A - uc002hno.2 ACACA_uc002hnn.... Hybrid_Cap...
ADAM17 2 9630245 9630245 SUDHL5_HAEMATOP... 37 3'UTR Del T - uc002qzu.2 IAH1_uc010yiz.1... Hybrid_Cap...
ADAM28 8 24193322 24193322 SUDHL5_HAEMATOP... 37 Intron SNP T G uc003xdy.2 ADAM28_uc003xdx... Hybrid_Cap... view
ADAM28 8 24211994 24211997 SUDHL5_HAEMATOP... 37 3'UTR Del CTAT - rs10610134 uc003xdy.2 ADAM28_uc011laa... Hybrid_Cap...
AKAP12 p.1531_1532insE 6 151674116 151674117 SUDHL5_HAEMATOP... 37 In_Frame_Ins Ins - GAG rs34737819 uc011eep.1 AKAP12_uc003qoe... Hybrid_Cap...
ALPK2 p.1388_1389FF>F 18 56203253 56203255 SUDHL5_HAEMATOP... 37 In_Frame_Del Del AAG - uc002lhj.3 ALPK2_uc002lhk.... Hybrid_Cap...
ARFGEF1 8 68255661 68255661 SUDHL5_HAEMATOP... 37 5'UTR SNP G A uc003xxo.1 Hybrid_Cap... view
ARID1A p.Q177H 1 27023425 27023425 SUDHL5_HAEMATOP... 37 Missense_Mutation SNP A T uc001bmv.1 ARID1A_uc001bmt... Hybrid_Cap... view
ARID1A p.G285* 1 27023747 27023747 SUDHL5_HAEMATOP... 37 Nonsense_Mutation SNP G T uc001bmv.1 ARID1A_uc001bmt... Hybrid_Cap... view
BIRC3 p.H225R 11 102195914 102195914 SUDHL5_HAEMATOP... 37 Missense_Mutation SNP A G uc001pgx.2 Hybrid_Cap... view
BMP4 14 54416601 54416602 SUDHL5_HAEMATOP... 37 3'UTR Ins - AT rs74495140;rs76335800 uc001xal.3 BMP4_uc010aoh.2... Hybrid_Cap...
C17ORF37 17 37885640 37885641 SUDHL5_HAEMATOP... 37 3'UTR Ins - G rs75811535 uc002hsq.2 Hybrid_Cap...
CACNB2 10 18828721 18828722 SUDHL5_HAEMATOP... 37 3'UTR Ins - AA rs3841459 uc001ipr.2 CACNB2_uc009xjz... Hybrid_Cap...
CAMK4 p.P180A 5 110782462 110782462 SUDHL5_HAEMATOP... 37 Missense_Mutation SNP C G uc011cvj.1 CAMK4_uc003kpf.... Hybrid_Cap... view
CASP1 11 104901289 104901289 SUDHL5_HAEMATOP... 37 Intron SNP C G uc010rve.1 CASP1_uc001pig.... Hybrid_Cap... view
CDK11B 1 1654066 1654068 SUDHL5_HAEMATOP... 37 Intron Del GCG - uc001agv.1 CDK11B_uc001aha... Hybrid_Cap...
CEP110 9 123939699 123939699 SUDHL5_HAEMATOP... 37 3'UTR Del T - rs75910820 uc004bkx.1 CEP110_uc004blb... Hybrid_Cap...
CSNK1A1 p.R77_splice 5 148929636 148929636 SUDHL5_HAEMATOP... 37 Splice_Site_SNP SNP A G uc003lqw.1 CSNK1A1_uc011dc... Hybrid_Cap... view
CSNK1A1 p.Y59D 5 148929693 148929693 SUDHL5_HAEMATOP... 37 Missense_Mutation SNP A C uc003lqw.1 CSNK1A1_uc011dc... Hybrid_Cap... view
CSNK1A1 p.E42A 5 148929743 148929743 SUDHL5_HAEMATOP... 37 Missense_Mutation SNP T G uc003lqw.1 CSNK1A1_uc011dc... Hybrid_Cap... view
CSNK1A1 5 148929795 148929795 SUDHL5_HAEMATOP... 37 Intron SNP T G uc003lqw.1 CSNK1A1_uc011dc... Hybrid_Cap... view
CSNK1A1 5 148929801 148929801 SUDHL5_HAEMATOP... 37 Intron SNP A T uc003lqw.1 CSNK1A1_uc011dc... Hybrid_Cap... view
DBF4 p.R7K 7 87506067 87506067 SUDHL5_HAEMATOP... 37 Missense_Mutation SNP G A uc003ujf.1 SLC25A40_uc003u... Hybrid_Cap... view
DNMT3B 20 31395893 31395893 SUDHL5_HAEMATOP... 37 3'UTR SNP G A uc002wyc.2 DNMT3B_uc002wyd... Hybrid_Cap... view
DST 6 56469162 56469162 SUDHL5_HAEMATOP... 37 Intron SNP T A uc003pdf.2 DST_uc003pcz.3_... Hybrid_Cap... view
EIF4A1 p.Q208L 17 7480482 7480482 SUDHL5_HAEMATOP... 37 Missense_Mutation SNP A T uc002gho.1 EIF4A1_uc002ghr... Hybrid_Cap... view
EP300 22 41574970 41574972 SUDHL5_HAEMATOP... 37 3'UTR Del GTA - rs76489032 uc003azl.3 Hybrid_Cap...
EXT1 8 118811807 118811807 SUDHL5_HAEMATOP... 37 3'UTR Del T - uc003yok.1 Hybrid_Cap...
F8 p.N1460fs X 154157686 154157686 SUDHL5_HAEMATOP... 37 Frame_Shift_Del Del T - uc004fmt.2 Hybrid_Cap...
FANCA p.R1400H 16 89805351 89805351 SUDHL5_HAEMATOP... 37 Missense_Mutation SNP C T uc002fou.1 ZNF276_uc010ciq... Hybrid_Cap... view
FGFR3 4 1809128 1809129 SUDHL5_HAEMATOP... 37 3'UTR Del GT - uc003gdu.2 FGFR3_uc003gdr.... Hybrid_Cap...
FLI1 11 128638217 128638217 SUDHL5_HAEMATOP... 37 Intron Del G - uc010sbu.1 FLI1_uc010sbt.1... Hybrid_Cap...
FN1 2 216244182 216244185 SUDHL5_HAEMATOP... 37 Intron Del GTAC - uc002vfa.2 FN1_uc002vfb.2_... Hybrid_Cap...
FOXO1 p.S205T 13 41239736 41239736 SUDHL5_HAEMATOP... 37 Missense_Mutation SNP C G uc001uxl.3 Hybrid_Cap... view
FZD1 7 90896245 90896245 SUDHL5_HAEMATOP... 37 3'UTR SNP T G uc003ula.2 Hybrid_Cap... view
GNAS p.A133P 20 57428717 57428717 SUDHL5_HAEMATOP... 37 Missense_Mutation SNP G C uc002xzw.2 GNASAS_uc002xzs... Hybrid_Cap... view
GPR112 p.D2657del X 135474445 135474447 SUDHL5_HAEMATOP... 37 In_Frame_Del Del GAT - rs3030295 uc004ezu.1 GPR112_uc010nsb... Hybrid_Cap...
GRIA3 X 122318386 122318387 SUDHL5_HAEMATOP... 37 Splice_Site_Ins Ins - G rs66632982 uc004etq.3 GRIA3_uc004etr.... Hybrid_Cap...
HIF1A 14 62213929 62213930 SUDHL5_HAEMATOP... 37 3'UTR Ins - T rs67890419 uc001xfs.2 HIF1A_uc001xfq.... Hybrid_Cap...
HNF1A 12 121434630 121434631 SUDHL5_HAEMATOP... 37 Intron Ins - TCATTCAT rs75100977 uc010szn.1 HNF1A_uc001tze.... Hybrid_Cap...
IGF1R 15 99192755 99192763 SUDHL5_HAEMATOP... 37 5'UTR Del TTTTT... - uc002bul.2 IGF1R_uc010urq.... Hybrid_Cap...
IL21R 16 27460779 27460780 SUDHL5_HAEMATOP... 37 3'UTR Ins - TG rs66690088 uc002doq.1 IL21R_uc002dor.... Hybrid_Cap...
ILK 11 6630029 6630029 SUDHL5_HAEMATOP... 37 Intron Del C - uc001mee.2 ILK_uc001mef.2_... Hybrid_Cap...
JARID2 p.R1221C 6 15520402 15520402 SUDHL5_HAEMATOP... 37 Missense_Mutation SNP C T uc003nbj.2 JARID2_uc011div... Hybrid_Cap... view
KLK7 19 51480672 51480675 SUDHL5_HAEMATOP... 37 3'UTR Del GGTT - uc002puo.2 KLK7_uc002pup.2... Hybrid_Cap...
LATS2 13 21620223 21620223 SUDHL5_HAEMATOP... 37 5'UTR Del A - rs115723063 uc009zzs.2 LATS2_uc001unr.... Hybrid_Cap...
LDHA p.K71_splice 11 18418516 18418519 SUDHL5_HAEMATOP... 37 Splice_Site_Del Del GTAA - uc010rdd.1 LDHA_uc001mok.3... Hybrid_Cap...
MAF 16 79628537 79628537 SUDHL5_HAEMATOP... 37 Intron Del T - uc002ffm.2 MAF_uc002ffn.2_... Hybrid_Cap...
MAML3 p.Q767_splice 4 140651585 140651587 SUDHL5_HAEMATOP... 37 Splice_Site_Del Del CTG - uc003ihz.1 MGST2_uc010ioi.... Hybrid_Cap...
MAP2K1 p.A347T 15 66782072 66782072 SUDHL5_HAEMATOP... 37 Missense_Mutation SNP G A uc010bhq.2 MAP2K1_uc010ujp... Hybrid_Cap... view
MAP3K1 p.T949del 5 56177849 56177851 SUDHL5_HAEMATOP... 37 In_Frame_Del Del CAA - uc003jqw.3 Hybrid_Cap...
MAP3K10 p.A501P 19 40715075 40715075 SUDHL5_HAEMATOP... 37 Missense_Mutation SNP G C uc002ona.2 MAP3K10_uc002on... Hybrid_Cap... view
MAP3K14 p.R218_splice 17 43364293 43364294 SUDHL5_HAEMATOP... 37 Splice_Site_Ins Ins - G rs66766023 uc002iiw.1 MAP3K14_uc010da... Hybrid_Cap...
MAP3K4 p.A1199del 6 161519351 161519353 SUDHL5_HAEMATOP... 37 In_Frame_Del Del CTG - uc003qtn.2 MAP3K4_uc010kkc... Hybrid_Cap...
MAPK4 p.H181N 18 48190869 48190869 SUDHL5_HAEMATOP... 37 Missense_Mutation SNP C A uc002lev.2 MAPK4_uc010xdm.... Hybrid_Cap... view
MAPKAPK3 3 50685575 50685575 SUDHL5_HAEMATOP... 37 3'UTR Del A - rs76026164 uc003day.1 MAPKAPK3_uc003d... Hybrid_Cap...
MCL1 p.N330N 1 150549914 150549914 SUDHL5_HAEMATOP... 37 Silent SNP A G uc001euz.2 MCL1_uc010pch.1... Hybrid_Cap... view
MCL1 p.Y15H 1 150551964 150551964 SUDHL5_HAEMATOP... 37 Missense_Mutation SNP A G uc001euz.2 MCL1_uc010pch.1... Hybrid_Cap... view
MSH3 p.PPA66del 5 79950742 79950750 SUDHL5_HAEMATOP... 37 In_Frame_Del Del CCCCC... - rs60484572;rs1047489 uc003kgz.2 DHFR_uc011ctl.1... Hybrid_Cap...
MYC p.P75A 8 128750686 128750686 SUDHL5_HAEMATOP... 37 Missense_Mutation SNP C G uc003ysi.2 MYC_uc003ysh.1_... Hybrid_Cap... view
MYLK 3 123332875 123332876 SUDHL5_HAEMATOP... 37 3'UTR Ins - T rs35930843;rs115544676 uc003ego.2 MYLK_uc003egl.2... Hybrid_Cap...
MYST4 p.E1104del 10 76781906 76781908 SUDHL5_HAEMATOP... 37 In_Frame_Del Del GAA - rs79644703 uc001jwn.1 MYST4_uc001jwm.... Hybrid_Cap...
NCAM1 11 112832307 112832308 SUDHL5_HAEMATOP... 37 5'UTR Ins - A rs117108942 uc009yyq.1 NCAM1_uc001pno.... Hybrid_Cap...
NCAM1 11 112832340 112832340 SUDHL5_HAEMATOP... 37 5'UTR Del C - uc009yyq.1 NCAM1_uc001pno.... Hybrid_Cap...
NCAPD3 p.G1428A 11 134023228 134023228 SUDHL5_HAEMATOP... 37 Missense_Mutation SNP C G uc001qhd.1 NCAPD3_uc010scm... Hybrid_Cap... view
NEK3 p.K313_splice 13 52718050 52718051 SUDHL5_HAEMATOP... 37 Splice_Site_Ins Ins - T rs72514762 uc001vgh.2 NEK3_uc001vgg.2... Hybrid_Cap...
NFATC1 p.E42E 18 77156350 77156350 SUDHL5_HAEMATOP... 37 Silent SNP A G uc010xfg.1 NFATC1_uc002lnc... Hybrid_Cap... view
NFATC1 p.E43_splice 18 77156352 77156352 SUDHL5_HAEMATOP... 37 Splice_Site_SNP SNP G T uc010xfg.1 NFATC1_uc002lnc... Hybrid_Cap... view
NFIA 1 61921185 61921186 SUDHL5_HAEMATOP... 37 3'UTR Ins - T rs57270124;rs76131997 uc010oos.1 NFIA_uc001czy.2... Hybrid_Cap...
NLRP3 p.A227V 1 247587425 247587425 SUDHL5_HAEMATOP... 37 Missense_Mutation SNP C T uc001icr.2 NLRP3_uc001ics.... Hybrid_Cap... view
NPM1 5 170837734 170837734 SUDHL5_HAEMATOP... 37 3'UTR Del T - uc011dex.1 NPM1_uc003mbi.2... Hybrid_Cap...
NR1H2 p.176_177insQ 19 50881820 50881821 SUDHL5_HAEMATOP... 37 In_Frame_Ins Ins - AAC rs66783852;rs112359270 uc010enw.2 NR1H2_uc002prv.... Hybrid_Cap...
PASK p.F369V 2 242076451 242076451 SUDHL5_HAEMATOP... 37 Missense_Mutation SNP A C uc010fzl.1 PASK_uc010zol.1... Hybrid_Cap... view
PAX3 2 223158653 223158653 SUDHL5_HAEMATOP... 37 Intron Del T - rs112753212 uc002vmt.1 PAX3_uc002vmy.1... Hybrid_Cap...
PDE4DIP p.S1941F 1 144864273 144864273 SUDHL5_HAEMATOP... 37 Missense_Mutation SNP G A uc001elw.3 NBPF10_uc009wir... Hybrid_Cap... view
PDIK1L 1 26449233 26449233 SUDHL5_HAEMATOP... 37 3'UTR SNP C T uc010oew.1 PDIK1L_uc001blj... Hybrid_Cap... view
PMAIP1 p.M1L 18 57567410 57567410 SUDHL5_HAEMATOP... 37 Missense_Mutation SNP A C uc002lic.2 PMAIP1_uc002lid... Hybrid_Cap... view
PML 15 74335622 74335622 SUDHL5_HAEMATOP... 37 Intron SNP C T uc002awv.2 PML_uc002awq.2_... Hybrid_Cap... view
PMS1 2 190670539 190670540 SUDHL5_HAEMATOP... 37 Intron Ins - A rs3214425 uc002urh.3 PMS1_uc010zga.1... Hybrid_Cap...
PRKAA2 p.I32_splice 1 57140052 57140052 SUDHL5_HAEMATOP... 37 Splice_Site_SNP SNP A T uc001cyk.3 Hybrid_Cap... view
PRKDC p.L1244fs 8 48805816 48805817 SUDHL5_HAEMATOP... 37 Frame_Shift_Ins Ins - G rs67588121 uc003xqi.2 PRKDC_uc003xqj.... Hybrid_Cap...
PTEN p.L25V 10 89624299 89624299 SUDHL5_HAEMATOP... 37 Missense_Mutation SNP T G uc001kfb.2 KILLIN_uc009xti... Hybrid_Cap... view
PTEN p.Y27_splice 10 89624307 89624307 SUDHL5_HAEMATOP... 37 Splice_Site_SNP SNP T C uc001kfb.2 KILLIN_uc009xti... Hybrid_Cap... view
RECQL4 p.R766fs 8 145738768 145738768 SUDHL5_HAEMATOP... 37 Frame_Shift_Del Del G - uc003zdj.2 Hybrid_Cap...
RPGRIP1 p.V1178G 14 21813272 21813272 SUDHL5_HAEMATOP... 37 Missense_Mutation SNP T G uc001wag.2 RPGRIP1_uc001wa... Hybrid_Cap... view
RPS6KA5 14 91360733 91360734 SUDHL5_HAEMATOP... 37 Intron Ins - T rs77438853 uc001xys.2 RPS6KA5_uc010tw... Hybrid_Cap...
SLC6A8 X 152957656 152957657 SUDHL5_HAEMATOP... 37 Intron Ins - A uc004fib.3 SLC6A8_uc004fic... Hybrid_Cap...
STK31 7 23872024 23872025 SUDHL5_HAEMATOP... 37 3'UTR Ins - TTTG rs66787534 uc003sws.3 STK31_uc003swt.... Hybrid_Cap...
STYK1 p.R211W 12 10782094 10782094 SUDHL5_HAEMATOP... 37 Missense_Mutation SNP G A uc001qys.2 Hybrid_Cap... view
TMEM123 11 102269398 102269398 SUDHL5_HAEMATOP... 37 3'UTR Del G - uc001pha.2 TMEM123_uc009yx... Hybrid_Cap...
TOE1 1 45805816 45805816 SUDHL5_HAEMATOP... 37 5'UTR SNP G C rs3219467 uc009vxq.2 MUTYH_uc001cnf.... Hybrid_Cap... view
TOP2B p.G1492_splice 3 25642717 25642717 SUDHL5_HAEMATOP... 37 Splice_Site_SNP SNP C T uc003cdj.2 TOP2B_uc011awm.... Hybrid_Cap... view
TP63 3 189507518 189507519 SUDHL5_HAEMATOP... 37 Intron Ins - AG rs62702062;rs79714037 uc003fry.2 TP63_uc003frx.2... Hybrid_Cap...
TRAF2 p.K195E 9 139804426 139804426 SUDHL5_HAEMATOP... 37 Missense_Mutation SNP A G uc010nbu.2 TRAF2_uc010nbv.... Hybrid_Cap... view
TRAF6 11 36523069 36523069 SUDHL5_HAEMATOP... 37 5'UTR SNP A C uc001mwr.1 TRAF6_uc001mws.... Hybrid_Cap... view
TRIB1 p.Y282N 8 126448438 126448438 SUDHL5_HAEMATOP... 37 Missense_Mutation SNP T A uc003yrx.2 TRIB1_uc011lis.... Hybrid_Cap... view
TRIM33 1 114940215 114940216 SUDHL5_HAEMATOP... 37 3'UTR Ins - G rs68133208 uc001eew.2 TRIM33_uc010owr... Hybrid_Cap...
TTBK1 p.E771del 6 43250726 43250728 SUDHL5_HAEMATOP... 37 In_Frame_Del Del GAA - uc003ouq.1 Hybrid_Cap...
TTN 2 179391640 179391640 SUDHL5_HAEMATOP... 37 3'UTR Del T - uc010zfg.1 TTN_uc010zfh.1_... Hybrid_Cap...
TTN p.M16333I 2 179463734 179463734 SUDHL5_HAEMATOP... 37 Missense_Mutation SNP C T uc010zfg.1 TTN_uc010zfh.1_... Hybrid_Cap... view
ULK2 p.R120Q 17 19750160 19750160 SUDHL5_HAEMATOP... 37 Missense_Mutation SNP C T uc002gwm.3 ULK2_uc002gwn.2... Hybrid_Cap... view
VEGFC p.S419_splice 4 177605082 177605084 SUDHL5_HAEMATOP... 37 Splice_Site_Del Del TCA - uc003ius.1 Hybrid_Cap...
WDHD1 p.M725I 14 55434001 55434001 SUDHL5_HAEMATOP... 37 Missense_Mutation SNP C G uc001xbm.1 WDHD1_uc010aom.... Hybrid_Cap... view
WNK1 p.R325T 12 936249 936249 SUDHL5_HAEMATOP... 37 Missense_Mutation SNP G C uc001qio.3 WNK1_uc001qin.2... Hybrid_Cap... view
ZNF423 p.R461H 16 49671681 49671681 SUDHL5_HAEMATOP... 37 Missense_Mutation SNP C T uc002efs.2 ZNF423_uc010vgn... Hybrid_Cap... view