Annotation Summary for Cell Line: SUP-M2  

Cell line primary name: SUP-M2
Cell line aliases:
Gender: F
Site Primary: haematopoietic_and_lymphoid_tissue
Histology: lymphoid_neoplasm
Hist Subtype1: anaplastic_large_cell_lymphoma
Notes:
Source: DSMZ
Expression arrays: CRAZY_p_NCLE_RNA10_HG-U133_Plus_2_G05_569418
SNP arrays: HONEY_p_NCLE_DNAAffy3_S_GenomeWideSNP_6_E06_293386
Oncomap: yes
Hybrid Capture Sequencing: yes


Mutations in SUP-M2

GeneProtein
Change
ChrStartEnd SampleNCBI
Build
Variant
Classification
Variant TypeReference
Allele
Tumor
Allele 1
dbSNP IDAnnotation
Transcript
Other
Transcripts
Method View
Reads
Mutation
Assessor
AAK1 p.541_542QQ>Q 2 69741754 69741756 SUPM2_HAEMATOPO... 37 In_Frame_Del Del TGT - rs55712143 uc002sfp.2 AAK1_uc010fdk.2... Hybrid_Cap...
ADAM17 2 9630245 9630245 SUPM2_HAEMATOPO... 37 3'UTR Del T - uc002qzu.2 IAH1_uc010yiz.1... Hybrid_Cap...
ADAM28 8 24211994 24211997 SUPM2_HAEMATOPO... 37 3'UTR Del CTAT - rs10610134 uc003xdy.2 ADAM28_uc011laa... Hybrid_Cap...
ADAM29 p.P783A 4 175899023 175899023 SUPM2_HAEMATOPO... 37 Missense_Mutation SNP C G uc003iuc.2 ADAM29_uc003iud... Hybrid_Cap... view
AKAP12 p.1531_1532insE 6 151674116 151674117 SUPM2_HAEMATOPO... 37 In_Frame_Ins Ins - GAG rs34737819 uc011eep.1 AKAP12_uc003qoe... Hybrid_Cap...
AKAP9 p.R3320L 7 91726232 91726232 SUPM2_HAEMATOPO... 37 Missense_Mutation SNP G T uc003ulg.2 AKAP9_uc003ulf.... Hybrid_Cap... view
C15ORF2 p.T758I 15 24923287 24923287 SUPM2_HAEMATOPO... 37 Missense_Mutation SNP C T uc001ywo.2 Hybrid_Cap... view
CACNB2 10 18828721 18828722 SUPM2_HAEMATOPO... 37 3'UTR Ins - AA rs3841459 uc001ipr.2 CACNB2_uc009xjz... Hybrid_Cap...
CDK11A 1 1636309 1636310 SUPM2_HAEMATOPO... 37 Intron Ins - A uc009vks.2 CDK11B_uc001ags... Hybrid_Cap...
CHD1 p.P1684del 5 98192165 98192167 SUPM2_HAEMATOPO... 37 In_Frame_Del Del AGG - rs79267787;rs61749618 uc003knf.2 CHD1_uc010jbn.2... Hybrid_Cap...
CNTN6 3 1339681 1339686 SUPM2_HAEMATOPO... 37 Intron Del GTTTT... - uc003boz.2 CNTN6_uc010hbo.... Hybrid_Cap...
CXCL12 10 44873992 44873993 SUPM2_HAEMATOPO... 37 Intron Ins - CT rs117617571 uc001jbh.2 CXCL12_uc001jbf... Hybrid_Cap...
EHBP1 2 63053541 63053541 SUPM2_HAEMATOPO... 37 Intron SNP T G uc002sby.2 EHBP1_uc010fcp.... Hybrid_Cap... view
ELL p.S519L 19 18557267 18557267 SUPM2_HAEMATOPO... 37 Missense_Mutation SNP G A uc002njh.2 ELL_uc010ebq.2_... Hybrid_Cap... view
EP300 p.Q1904P 22 41573426 41573426 SUPM2_HAEMATOPO... 37 Missense_Mutation SNP A C uc003azl.3 Hybrid_Cap... view
ETV1 7 14028708 14028708 SUPM2_HAEMATOPO... 37 5'UTR Del A - rs77190713 uc011jxq.1 ETV1_uc011jxn.1... Hybrid_Cap...
FGF1 p.L28I 5 141993611 141993611 SUPM2_HAEMATOPO... 37 Missense_Mutation SNP G T uc003lmm.2 FGF1_uc011dbi.1... Hybrid_Cap... view
FGFR3 4 1809128 1809129 SUPM2_HAEMATOPO... 37 3'UTR Del GT - uc003gdu.2 FGFR3_uc003gdr.... Hybrid_Cap...
FGFR4 5 176524891 176524891 SUPM2_HAEMATOPO... 37 3'UTR SNP C T uc003mfl.2 FGFR4_uc003mfm.... Hybrid_Cap... view
FLI1 11 128638217 128638217 SUPM2_HAEMATOPO... 37 Intron Del G - uc010sbu.1 FLI1_uc010sbt.1... Hybrid_Cap...
FLT1 p.C1039S 13 28895659 28895659 SUPM2_HAEMATOPO... 37 Missense_Mutation SNP A T uc001usb.3 FLT1_uc010aap.2... Hybrid_Cap... view
GRIA3 X 122318386 122318387 SUPM2_HAEMATOPO... 37 Splice_Site_Ins Ins - G rs66632982 uc004etq.3 GRIA3_uc004etr.... Hybrid_Cap...
HEPH p.R71W X 65392231 65392231 SUPM2_HAEMATOPO... 37 Missense_Mutation SNP C T uc011moz.1 HEPH_uc004dwn.2... Hybrid_Cap... view
HIPK3 p.H1099N 11 33374761 33374761 SUPM2_HAEMATOPO... 37 Missense_Mutation SNP C A uc001mul.1 HIPK3_uc001mum.... Hybrid_Cap... view
HNF1A 12 121434630 121434631 SUPM2_HAEMATOPO... 37 Intron Ins - TCATTCAT rs75100977 uc010szn.1 HNF1A_uc001tze.... Hybrid_Cap...
ILK 11 6630029 6630029 SUPM2_HAEMATOPO... 37 Intron Del C - uc001mee.2 ILK_uc001mef.2_... Hybrid_Cap...
ITPR2 p.R470_splice 12 26834804 26834805 SUPM2_HAEMATOPO... 37 Splice_Site_Ins Ins - ACTC rs66696203;rs59199365 uc001rhg.2 Hybrid_Cap...
KSR1 p.R126C 17 25909938 25909938 SUPM2_HAEMATOPO... 37 Missense_Mutation SNP C T uc010crg.2 KSR1_uc002gzj.1... Hybrid_Cap... view
MAML2 p.604_607QQQQ>Q 11 95825375 95825383 SUPM2_HAEMATOPO... 37 In_Frame_Del Del TGCTG... - rs113349418 uc001pfw.1 Hybrid_Cap...
MAML3 p.Q767_splice 4 140651585 140651587 SUPM2_HAEMATOPO... 37 Splice_Site_Del Del CTG - uc003ihz.1 MGST2_uc010ioi.... Hybrid_Cap...
MAP3K1 p.T949del 5 56177849 56177851 SUPM2_HAEMATOPO... 37 In_Frame_Del Del CAA - uc003jqw.3 Hybrid_Cap...
MAP3K14 p.R218_splice 17 43364293 43364294 SUPM2_HAEMATOPO... 37 Splice_Site_Ins Ins - G rs66766023 uc002iiw.1 MAP3K14_uc010da... Hybrid_Cap...
MAPKAPK3 3 50685575 50685575 SUPM2_HAEMATOPO... 37 3'UTR Del A - rs76026164 uc003day.1 MAPKAPK3_uc003d... Hybrid_Cap...
MAST4 p.R9Q 5 66124697 66124697 SUPM2_HAEMATOPO... 37 Missense_Mutation SNP G A uc003jut.1 MAST4_uc003jur.... Hybrid_Cap... view
MGC42105 p.P341L 5 43280542 43280542 SUPM2_HAEMATOPO... 37 Missense_Mutation SNP C T uc003jno.2 Hybrid_Cap... view
MLL3 p.Y816fs 7 151945071 151945072 SUPM2_HAEMATOPO... 37 Frame_Shift_Ins Ins - T uc003wla.2 Hybrid_Cap...
MYLK p.P1431P 3 123368037 123368037 SUPM2_HAEMATOPO... 37 Silent SNP C T uc003ego.2 MYLK_uc010hrr.2... Hybrid_Cap... view
NCAM1 11 112832307 112832308 SUPM2_HAEMATOPO... 37 5'UTR Ins - A rs117108942 uc009yyq.1 NCAM1_uc001pno.... Hybrid_Cap...
NCAM1 11 112832340 112832340 SUPM2_HAEMATOPO... 37 5'UTR Del C - uc009yyq.1 NCAM1_uc001pno.... Hybrid_Cap...
NCOA3 p.Q1276del 20 46279837 46279839 SUPM2_HAEMATOPO... 37 In_Frame_Del Del CAG - rs2664555 uc002xtk.2 NCOA3_uc010ght.... Hybrid_Cap...
NEK3 p.K313_splice 13 52718050 52718051 SUPM2_HAEMATOPO... 37 Splice_Site_Ins Ins - T rs72514762 uc001vgh.2 NEK3_uc001vgg.2... Hybrid_Cap...
NPR1 1 153665919 153665920 SUPM2_HAEMATOPO... 37 3'UTR Ins - C rs66682713 uc001fcs.3 NPR1_uc010pdz.1... Hybrid_Cap...
NR1H2 p.176_177insQ 19 50881822 50881823 SUPM2_HAEMATOPO... 37 In_Frame_Ins Ins - CAG rs61751954;rs1052533 uc010enw.2 NR1H2_uc002prv.... Hybrid_Cap...
PAX3 2 223158653 223158653 SUPM2_HAEMATOPO... 37 Intron Del T - rs112753212 uc002vmt.1 PAX3_uc002vmy.1... Hybrid_Cap...
PDE4DIP p.Q1665fs 1 144873963 144873963 SUPM2_HAEMATOPO... 37 Frame_Shift_Del Del T - uc001elw.3 NBPF10_uc009wir... Hybrid_Cap...
PDE4DIP p.V486fs 1 144917828 144917828 SUPM2_HAEMATOPO... 37 Frame_Shift_Del Del A - uc001elw.3 NBPF10_uc009wir... Hybrid_Cap...
PGGT1B 5 114548071 114548072 SUPM2_HAEMATOPO... 37 3'UTR Ins - C uc003kqw.3 PGGT1B_uc003kqx... Hybrid_Cap...
PI4KA p.P1736L 22 21068925 21068925 SUPM2_HAEMATOPO... 37 Missense_Mutation SNP G A uc002zsz.3 PI4KA_uc010gsp.... Hybrid_Cap... view
PIP5KL1 p.R263C 9 130687516 130687516 SUPM2_HAEMATOPO... 37 Missense_Mutation SNP G A uc011mao.1 PIP5KL1_uc004bs... Hybrid_Cap... view
PMS1 2 190670539 190670540 SUPM2_HAEMATOPO... 37 Intron Ins - A rs3214425 uc002urh.3 PMS1_uc010zga.1... Hybrid_Cap...
PRKDC p.L1244fs 8 48805816 48805817 SUPM2_HAEMATOPO... 37 Frame_Shift_Ins Ins - G rs67588121 uc003xqi.2 PRKDC_uc003xqj.... Hybrid_Cap...
RASA3 p.Y299C 13 114784285 114784285 SUPM2_HAEMATOPO... 37 Missense_Mutation SNP T C uc001vui.2 RASA3_uc010tkk.... Hybrid_Cap... view
RECQL4 p.D1142H 8 145737142 145737142 SUPM2_HAEMATOPO... 37 Missense_Mutation SNP C G rs61755067 uc003zdj.2 Hybrid_Cap... view
SLCO4A1 p.V722A 20 61303241 61303241 SUPM2_HAEMATOPO... 37 Missense_Mutation SNP T C uc002ydb.1 SLCO4A1_uc002yd... Hybrid_Cap... view
STAG3 p.F1015I 7 99802719 99802719 SUPM2_HAEMATOPO... 37 Missense_Mutation SNP T A uc003utx.1 STAG3_uc011kjk.... Hybrid_Cap... view
TEC 4 48139307 48139310 SUPM2_HAEMATOPO... 37 3'UTR Del TTAT - rs79098351 uc003gxz.2 Hybrid_Cap...
TGFB2 1 218519928 218519929 SUPM2_HAEMATOPO... 37 5'UTR Ins - AAAC uc001hln.2 TGFB2_uc001hll.... Hybrid_Cap...
TP63 3 189507518 189507519 SUPM2_HAEMATOPO... 37 Intron Ins - AGAG rs62702062;rs79714037 uc003fry.2 TP63_uc003frx.2... Hybrid_Cap...
VEGFC p.S419_splice 4 177605082 177605084 SUPM2_HAEMATOPO... 37 Splice_Site_Del Del TCA - uc003ius.1 Hybrid_Cap...
ZBTB16 11 114121371 114121372 SUPM2_HAEMATOPO... 37 3'UTR Ins - A uc001pop.2 ZBTB16_uc001poq... Hybrid_Cap...
ZNF608 5 124080776 124080776 SUPM2_HAEMATOPO... 37 5'UTR Del A - uc003ktq.1 ZNF608_uc003ktr... Hybrid_Cap...