Annotation Summary for Cell Line: TC-71  

Cell line primary name: TC-71
Cell line aliases:
Gender: M
Site Primary: bone
Histology: Ewings_sarcoma-peripheral_primitive_neuroectodermal_tumour
Hist Subtype1: NS
Notes:
Source: DSMZ
Expression arrays: AGENT_p_NCLE_RNA6_HG-U133_Plus_2_B02_436622
SNP arrays: BOWER_p_NCLE_DNAAffy8_GenomeWideSNP_6_E08_464706
Oncomap: yes
Hybrid Capture Sequencing: yes


Mutations in TC-71

GeneProtein
Change
ChrStartEnd SampleNCBI
Build
Variant
Classification
Variant TypeReference
Allele
Tumor
Allele 1
dbSNP IDAnnotation
Transcript
Other
Transcripts
Method View
Reads
Mutation
Assessor
ADAM17 2 9630245 9630245 TC71_BONE 37 3'UTR Del T - uc002qzu.2 IAH1_uc010yiz.1... Hybrid_Cap...
ADAM29 p.G108R 4 175896998 175896998 TC71_BONE 37 Missense_Mutation SNP G A uc003iuc.2 ADAM29_uc003iud... Hybrid_Cap... view
AKAP12 p.1531_1532insE 6 151674116 151674117 TC71_BONE 37 In_Frame_Ins Ins - GAG rs34737819 uc011eep.1 AKAP12_uc003qoe... Hybrid_Cap...
CDK11B p.K127_splice 1 1647893 1647894 TC71_BONE 37 Splice_Site_Ins Ins - TTTCTT rs114930018 uc001agv.1 CDK11B_uc001ags... Hybrid_Cap...
CHD1 p.P1684del 5 98192165 98192167 TC71_BONE 37 In_Frame_Del Del AGG - rs79267787;rs61749618 uc003knf.2 CHD1_uc010jbn.2... Hybrid_Cap...
CSPP1 p.N40fs 8 67986498 67986499 TC71_BONE 37 Frame_Shift_Ins Ins - T uc003xxi.2 CSPP1_uc003xxg.... Hybrid_Cap...
CTBP2 p.K974fs 10 126678123 126678123 TC71_BONE 37 Frame_Shift_Del Del T - uc001lie.3 CTBP2_uc009yak.... Hybrid_Cap...
ERBB4 p.A1236V 2 212248560 212248560 TC71_BONE 37 Missense_Mutation SNP G A uc002veg.1 ERBB4_uc002veh.... Hybrid_Cap... view
FGFR1OP 6 167453519 167453520 TC71_BONE 37 3'UTR Ins - T rs115519488 uc003qvj.2 CCR6_uc003qvl.2... Hybrid_Cap...
IFNG p.R152Q 12 68549179 68549179 TC71_BONE 37 Missense_Mutation SNP C T uc001stw.1 Hybrid_Cap... view
KIAA1804 p.P370T 1 233489674 233489674 TC71_BONE 37 Missense_Mutation SNP C A uc001hvt.3 KIAA1804_uc001h... Hybrid_Cap... view
LRP1B p.C2871* 2 141260581 141260581 TC71_BONE 37 Nonsense_Mutation SNP A T uc002tvj.1 Hybrid_Cap... view
MLL3 p.P4726S 7 151841965 151841965 TC71_BONE 37 Missense_Mutation SNP G A uc003wla.2 MLL3_uc003wkz.2... Hybrid_Cap... view
MLL3 p.Y816fs 7 151945071 151945072 TC71_BONE 37 Frame_Shift_Ins Ins - T uc003wla.2 Hybrid_Cap...
MRE11A 11 94225876 94225876 TC71_BONE 37 Intron SNP T C uc001peu.2 MRE11A_uc001pev... Hybrid_Cap... view
NUP98 p.G98R 11 3800166 3800166 TC71_BONE 37 Missense_Mutation SNP C T uc001lyh.2 NUP98_uc001lyi.... Hybrid_Cap... view
PIK3C2G p.K1128fs 12 18691148 18691148 TC71_BONE 37 Frame_Shift_Del Del A - uc010sib.1 PIK3C2G_uc001rd... Hybrid_Cap...
PLEKHA5 p.E1130K 12 19519001 19519001 TC71_BONE 37 Missense_Mutation SNP G A uc001rea.2 PLEKHA5_uc001re... Hybrid_Cap... view
PRKDC p.L1244fs 8 48805816 48805817 TC71_BONE 37 Frame_Shift_Ins Ins - G rs67588121 uc003xqi.2 PRKDC_uc003xqj.... Hybrid_Cap...
TP53 p.R213* 17 7578212 7578212 TC71_BONE 37 Nonsense_Mutation SNP G A uc002gim.2 TP53_uc002gig.1... Hybrid_Cap... view
VEGFC p.S419_splice 4 177605082 177605084 TC71_BONE 37 Splice_Site_Del Del TCA - uc003ius.1 Hybrid_Cap...