Annotation Summary for Cell Line: WSU-DLCL2  

Cell line primary name: WSU-DLCL2
Cell line aliases:
Gender: M
Site Primary: haematopoietic_and_lymphoid_tissue
Histology: lymphoid_neoplasm
Hist Subtype1: diffuse_large_B_cell_lymphoma
Notes:
Source: DSMZ
Expression arrays: WATCH_p_NCLE_RNA8_HG-U133_Plus_2_H07_474624
SNP arrays: CHARY_p_NCLE_DNAAffy9_GenomeWideSNP_6_F06_490482
Oncomap: yes
Hybrid Capture Sequencing: yes


Mutations in WSU-DLCL2

GeneProtein
Change
ChrStartEnd SampleNCBI
Build
Variant
Classification
Variant TypeReference
Allele
Tumor
Allele 1
dbSNP IDAnnotation
Transcript
Other
Transcripts
Method View
Reads
Mutation
Assessor
ADAM28 p.G411E 8 24188791 24188791 WSUDLCL2_HAEMAT... 37 Missense_Mutation SNP G A uc003xdy.2 ADAM28_uc003xdx... Hybrid_Cap... view
ADAM28 8 24211994 24211997 WSUDLCL2_HAEMAT... 37 3'UTR Del CTAT - rs10610134 uc003xdy.2 ADAM28_uc011laa... Hybrid_Cap...
ADAM29 p.L691del 4 175898744 175898746 WSUDLCL2_HAEMAT... 37 In_Frame_Del Del TTA - uc003iuc.2 ADAM29_uc003iud... Hybrid_Cap...
AKAP12 p.E409D 6 151670753 151670753 WSUDLCL2_HAEMAT... 37 Missense_Mutation SNP A T uc011eep.1 AKAP12_uc003qoe... Hybrid_Cap... view
AKAP12 p.1531_1532insE 6 151674116 151674117 WSUDLCL2_HAEMAT... 37 In_Frame_Ins Ins - GAG rs34737819 uc011eep.1 AKAP12_uc003qoe... Hybrid_Cap...
AKAP9 p.1335_1336insQ 7 91652178 91652179 WSUDLCL2_HAEMAT... 37 In_Frame_Ins Ins - AAC rs34756483 uc003ulg.2 AKAP9_uc003ule.... Hybrid_Cap...
ALPK2 p.1388_1389FF>F 18 56203253 56203255 WSUDLCL2_HAEMAT... 37 In_Frame_Del Del AAG - uc002lhj.3 ALPK2_uc002lhk.... Hybrid_Cap...
ATP11A p.D1090N 13 113530196 113530196 WSUDLCL2_HAEMAT... 37 Missense_Mutation SNP G A uc001vsj.3 ATP11A_uc001vsi... Hybrid_Cap... view
AURKC 19 57742494 57742507 WSUDLCL2_HAEMAT... 37 5'UTR Del GGACG... - rs67926438;rs112039303;rs59094959 uc002qoe.2 AURKC_uc002qoc.... Hybrid_Cap...
BCR 22 23631813 23631814 WSUDLCL2_HAEMAT... 37 Intron Ins - C rs66503844 uc002zww.2 BCR_uc002zwx.2_... Hybrid_Cap...
BCR 22 23632777 23632778 WSUDLCL2_HAEMAT... 37 Intron Ins - T uc002zww.2 BCR_uc002zwx.2_... Hybrid_Cap...
C17ORF37 17 37885640 37885641 WSUDLCL2_HAEMAT... 37 3'UTR Ins - G rs75811535 uc002hsq.2 Hybrid_Cap...
CDK12 p.I619V 17 37627940 37627940 WSUDLCL2_HAEMAT... 37 Missense_Mutation SNP A G uc010cvv.2 CDK12_uc010wef.... Hybrid_Cap... view
CHD8 14 21853630 21853630 WSUDLCL2_HAEMAT... 37 3'UTR Del T - rs78520772 uc001was.1 CHD8_uc001war.1... Hybrid_Cap...
CLTCL1 p.V1201_splice 22 19189003 19189004 WSUDLCL2_HAEMAT... 37 Splice_Site_Ins Ins - C rs11386977 uc002zpb.2 CLTCL1_uc011agv... Hybrid_Cap...
CREB3L2 p.T100del 7 137612914 137612916 WSUDLCL2_HAEMAT... 37 In_Frame_Del Del TGG - uc003vtw.2 CREB3L2_uc003vt... Hybrid_Cap...
CREBBP p.K1203_splice 16 3807808 3807808 WSUDLCL2_HAEMAT... 37 Splice_Site_SNP SNP A T uc002cvv.2 CREBBP_uc002cvw... Hybrid_Cap... view
DCLK1 p.Y74* 13 36700053 36700053 WSUDLCL2_HAEMAT... 37 Nonsense_Mutation SNP A T uc001uvf.2 Hybrid_Cap... view
EP300 22 41574970 41574972 WSUDLCL2_HAEMAT... 37 3'UTR Del GTA - rs76489032 uc003azl.3 Hybrid_Cap...
ERBB4 p.V949I 2 212288901 212288901 WSUDLCL2_HAEMAT... 37 Missense_Mutation SNP C T uc002veg.1 ERBB4_uc002veh.... Hybrid_Cap... view
FBN2 5 127595046 127595048 WSUDLCL2_HAEMAT... 37 3'UTR Del TTA - uc003kuu.2 Hybrid_Cap...
FBN2 p.F1670L 5 127647056 127647056 WSUDLCL2_HAEMAT... 37 Missense_Mutation SNP A C uc003kuu.2 Hybrid_Cap... view
FGFR1OP 6 167453519 167453520 WSUDLCL2_HAEMAT... 37 3'UTR Ins - T rs115519488 uc003qvj.2 CCR6_uc003qvl.2... Hybrid_Cap...
FGFR3 4 1809128 1809129 WSUDLCL2_HAEMAT... 37 3'UTR Del GT - uc003gdu.2 FGFR3_uc003gdr.... Hybrid_Cap...
FGFR4 p.A749S 5 176524384 176524384 WSUDLCL2_HAEMAT... 37 Missense_Mutation SNP G T uc003mfl.2 FGFR4_uc003mfm.... Hybrid_Cap... view
FGFR4 p.E753V 5 176524397 176524397 WSUDLCL2_HAEMAT... 37 Missense_Mutation SNP A T uc003mfl.2 FGFR4_uc003mfm.... Hybrid_Cap... view
FLI1 11 128638217 128638217 WSUDLCL2_HAEMAT... 37 Intron Del G - uc010sbu.1 FLI1_uc010sbt.1... Hybrid_Cap...
FLNA X 153577132 153577133 WSUDLCL2_HAEMAT... 37 3'UTR Ins - CA rs10692455;rs71733538 uc004fkk.2 FLNA_uc004fki.2... Hybrid_Cap...
FLT3 p.L168F 13 28626792 28626792 WSUDLCL2_HAEMAT... 37 Missense_Mutation SNP T G uc001urw.2 FLT3_uc010aao.2... Hybrid_Cap... view
FMN2 p.PPLPGAGIPPP939del 1 240370914 240370946 WSUDLCL2_HAEMAT... 37 In_Frame_Del Del GCCCC... - rs4997328;rs4997329 uc010pye.1 FMN2_uc010pyd.1... Hybrid_Cap...
FN1 2 216244182 216244185 WSUDLCL2_HAEMAT... 37 Intron Del GTAC - uc002vfa.2 FN1_uc002vfb.2_... Hybrid_Cap...
GRIA3 X 122318386 122318387 WSUDLCL2_HAEMAT... 37 Splice_Site_Ins Ins - G rs66632982 uc004etq.3 GRIA3_uc004etr.... Hybrid_Cap...
GRK1 13 114321641 114321641 WSUDLCL2_HAEMAT... 37 De_novo_Start_OutOfFrame SNP C T uc010tkf.1 Hybrid_Cap... view
GUCY2C 12 14827464 14827466 WSUDLCL2_HAEMAT... 37 Intron Del ATC - rs72525754;rs3083879 uc001rcd.2 GUCY2C_uc009zhz... Hybrid_Cap...
HNF1A 12 121434630 121434631 WSUDLCL2_HAEMAT... 37 Intron Ins - TCATTCAT rs75100977 uc010szn.1 HNF1A_uc001tze.... Hybrid_Cap...
ILK 11 6630029 6630029 WSUDLCL2_HAEMAT... 37 Intron Del C - uc001mee.2 ILK_uc001mef.2_... Hybrid_Cap...
INSRR p.F61I 1 156824000 156824000 WSUDLCL2_HAEMAT... 37 Missense_Mutation SNP A T uc010pht.1 NTRK1_uc001fqf.... Hybrid_Cap... view
ITPR2 p.R470_splice 12 26834804 26834805 WSUDLCL2_HAEMAT... 37 Splice_Site_Ins Ins - ACTC rs66696203;rs59199365 uc001rhg.2 Hybrid_Cap...
LMNA 1 156109027 156109027 WSUDLCL2_HAEMAT... 37 3'UTR SNP T G uc001fni.2 LMNA_uc001fnh.2... Hybrid_Cap... view
LRP1B p.I2120T 2 141459358 141459358 WSUDLCL2_HAEMAT... 37 Missense_Mutation SNP A G uc002tvj.1 Hybrid_Cap... view
LSP1 p.R377H 11 1907990 1907990 WSUDLCL2_HAEMAT... 37 Missense_Mutation SNP G A uc001luj.2 LSP1_uc001lui.2... Hybrid_Cap... view
MAML3 p.Q767_splice 4 140651585 140651587 WSUDLCL2_HAEMAT... 37 Splice_Site_Del Del CTG - uc003ihz.1 MGST2_uc010ioi.... Hybrid_Cap...
MAP3K1 p.T949del 5 56177849 56177851 WSUDLCL2_HAEMAT... 37 In_Frame_Del Del CAA - uc003jqw.3 Hybrid_Cap...
MAP3K14 p.R218_splice 17 43364293 43364294 WSUDLCL2_HAEMAT... 37 Splice_Site_Ins Ins - G rs66766023 uc002iiw.1 MAP3K14_uc010da... Hybrid_Cap...
MAPKAPK3 3 50685575 50685575 WSUDLCL2_HAEMAT... 37 3'UTR Del A - rs76026164 uc003day.1 MAPKAPK3_uc003d... Hybrid_Cap...
MAPKBP1 15 42111753 42111754 WSUDLCL2_HAEMAT... 37 Intron Ins - C rs3034891 uc001zok.3 MAPKBP1_uc001zo... Hybrid_Cap...
MCF2 X 138724841 138724842 WSUDLCL2_HAEMAT... 37 Intron Ins - A uc011mwo.1 MCF2_uc004fau.2... Hybrid_Cap...
MLLT10 p.R452W 10 21962581 21962581 WSUDLCL2_HAEMAT... 37 Missense_Mutation SNP C T uc001iqs.2 MLLT10_uc001iqt... Hybrid_Cap... view
MSH3 p.PPA66del 5 79950742 79950750 WSUDLCL2_HAEMAT... 37 In_Frame_Del Del CCCCC... - rs60484572;rs1047489 uc003kgz.2 DHFR_uc011ctl.1... Hybrid_Cap...
NCAM1 11 112832307 112832308 WSUDLCL2_HAEMAT... 37 5'UTR Ins - A rs117108942 uc009yyq.1 NCAM1_uc001pno.... Hybrid_Cap...
NCAM1 11 112832340 112832340 WSUDLCL2_HAEMAT... 37 5'UTR Del C - uc009yyq.1 NCAM1_uc001pno.... Hybrid_Cap...
NEK3 p.K313_splice 13 52718050 52718051 WSUDLCL2_HAEMAT... 37 Splice_Site_Ins Ins - T rs72514762 uc001vgh.2 NEK3_uc001vgg.2... Hybrid_Cap...
NF1 p.Y1671Y 17 29653015 29653015 WSUDLCL2_HAEMAT... 37 Silent SNP C T uc002hgg.2 NF1_uc002hgh.2_... Hybrid_Cap... view
NFIA 1 61921185 61921186 WSUDLCL2_HAEMAT... 37 3'UTR Ins - T rs57270124;rs76131997 uc010oos.1 NFIA_uc001czy.2... Hybrid_Cap...
NOTCH4 p.15_16LL>L 6 32191659 32191661 WSUDLCL2_HAEMAT... 37 In_Frame_Del Del AGC - uc003obb.2 NOTCH4_uc011dpu... Hybrid_Cap...
NR1H2 p.176_177insQ 19 50881820 50881821 WSUDLCL2_HAEMAT... 37 In_Frame_Ins Ins - AAC rs66783852;rs112359270 uc010enw.2 NR1H2_uc002prv.... Hybrid_Cap...
PAX3 2 223065754 223065755 WSUDLCL2_HAEMAT... 37 3'UTR Del AC - uc002vmt.1 PAX3_uc002vmy.1... Hybrid_Cap...
PAX3 2 223158653 223158653 WSUDLCL2_HAEMAT... 37 Intron Del T - rs112753212 uc002vmt.1 PAX3_uc002vmy.1... Hybrid_Cap...
PCDH15 p.AP1770del 10 55582194 55582199 WSUDLCL2_HAEMAT... 37 In_Frame_Del Del AGGAG... - uc010qhy.1 PCDH15_uc010qhq... Hybrid_Cap...
PDGFRA p.E334* 4 54292115 54292115 WSUDLCL2_HAEMAT... 37 Nonsense_Mutation SNP G T uc003haa.2 FIP1L1_uc003gzx... Hybrid_Cap... view
PGGT1B 5 114548071 114548072 WSUDLCL2_HAEMAT... 37 3'UTR Ins - C uc003kqw.3 PGGT1B_uc003kqx... Hybrid_Cap...
PIK3C2G p.P129del 12 18435399 18435401 WSUDLCL2_HAEMAT... 37 In_Frame_Del Del CCC - uc010sib.1 PIK3C2G_uc001rd... Hybrid_Cap...
PMS1 2 190670539 190670540 WSUDLCL2_HAEMAT... 37 Intron Ins - A rs3214425 uc002urh.3 PMS1_uc010zga.1... Hybrid_Cap...
PRKDC p.L1244fs 8 48805816 48805817 WSUDLCL2_HAEMAT... 37 Frame_Shift_Ins Ins - G rs67588121 uc003xqi.2 PRKDC_uc003xqj.... Hybrid_Cap...
RALGDS p.R166H 9 135987439 135987439 WSUDLCL2_HAEMAT... 37 Missense_Mutation SNP C T uc011mcw.1 RALGDS_uc004cco... Hybrid_Cap... view
RASGRF1 15 79277150 79277151 WSUDLCL2_HAEMAT... 37 Intron Ins - C rs67045840;rs77640668 uc002beq.2 RASGRF1_uc002be... Hybrid_Cap...
RECQL4 p.R766fs 8 145738768 145738768 WSUDLCL2_HAEMAT... 37 Frame_Shift_Del Del G - uc003zdj.2 Hybrid_Cap...
ROR1 p.S758F 1 64643997 64643997 WSUDLCL2_HAEMAT... 37 Missense_Mutation SNP C T uc001dbj.2 Hybrid_Cap... view
SOS1 p.S1116_splice 2 39216456 39216456 WSUDLCL2_HAEMAT... 37 Splice_Site_SNP SNP C T uc002rrk.3 SOS1_uc002rrj.3... Hybrid_Cap... view
STK31 7 23872024 23872025 WSUDLCL2_HAEMAT... 37 3'UTR Ins - TTTG rs66787534 uc003sws.3 STK31_uc003swt.... Hybrid_Cap...
TAL1 p.R195W 1 47685805 47685805 WSUDLCL2_HAEMAT... 37 Missense_Mutation SNP G A uc001cqx.2 TAL1_uc009vyq.2... Hybrid_Cap... view
TCF21 6 134210497 134210498 WSUDLCL2_HAEMAT... 37 5'UTR Ins - TCTC rs35199378 uc003qei.3 TCF21_uc003qej.... Hybrid_Cap...
TEC 4 48139307 48139310 WSUDLCL2_HAEMAT... 37 3'UTR Del TTAT - rs79098351 uc003gxz.2 Hybrid_Cap...
TNRC6B p.Q1328del 22 40697177 40697179 WSUDLCL2_HAEMAT... 37 In_Frame_Del Del GCA - rs114291931 uc011aor.1 TNRC6B_uc003aym... Hybrid_Cap...
TP53 p.R248Q 17 7577538 7577538 WSUDLCL2_HAEMAT... 37 Missense_Mutation SNP C T rs11540652 uc002gim.2 TP53_uc002gig.1... Hybrid_Cap... view
TP63 3 189507518 189507519 WSUDLCL2_HAEMAT... 37 Intron Ins - AG rs62702062;rs79714037 uc003fry.2 TP63_uc003frx.2... Hybrid_Cap...
VEGFC p.S419_splice 4 177605082 177605084 WSUDLCL2_HAEMAT... 37 Splice_Site_Del Del TCA - uc003ius.1 Hybrid_Cap...
WDHD1 p.S316C 14 55462527 55462527 WSUDLCL2_HAEMAT... 37 Missense_Mutation SNP G C uc001xbm.1 WDHD1_uc001xbn.... Hybrid_Cap... view
WEE1 p.P440L 11 9606835 9606835 WSUDLCL2_HAEMAT... 37 Missense_Mutation SNP C T uc001mhs.2 WEE1_uc001mht.2... Hybrid_Cap... view
WNK1 p.D224G 12 863402 863402 WSUDLCL2_HAEMAT... 37 Missense_Mutation SNP A G uc001qio.3 WNK1_uc001qin.2... Hybrid_Cap... view
ZAP70 2 98351655 98351655 WSUDLCL2_HAEMAT... 37 Intron Del G - uc002syd.1 ZAP70_uc010yvf.... Hybrid_Cap...