Annotation Summary for Cell Line: YAPC  

Cell line primary name: YAPC
Cell line aliases:
Gender: M
Site Primary: pancreas
Histology: carcinoma
Hist Subtype1: NS
Notes:
Source: DSMZ
Expression arrays: CRAZY_p_NCLE_RNA10_HG-U133_Plus_2_H05_569442
SNP arrays: HONEY_p_NCLE_DNAAffy3_S_GenomeWideSNP_6_A07_293292
Oncomap: yes
Hybrid Capture Sequencing: yes


Mutations in YAPC

GeneProtein
Change
ChrStartEnd SampleNCBI
Build
Variant
Classification
Variant TypeReference
Allele
Tumor
Allele 1
dbSNP IDAnnotation
Transcript
Other
Transcripts
Method View
Reads
Mutation
Assessor
AAK1 p.541_542QQ>Q 2 69741754 69741756 YAPC_PANCREAS 37 In_Frame_Del Del TGT - rs55712143 uc002sfp.2 AAK1_uc010fdk.2... Hybrid_Cap...
AKAP12 p.1531_1532insE 6 151674116 151674117 YAPC_PANCREAS 37 In_Frame_Ins Ins - GAG rs34737819 uc011eep.1 AKAP12_uc003qoe... Hybrid_Cap...
AKAP9 p.1335_1336insQ 7 91652178 91652179 YAPC_PANCREAS 37 In_Frame_Ins Ins - AAC rs34756483 uc003ulg.2 AKAP9_uc003ule.... Hybrid_Cap...
ATP11A p.F981S 13 113516840 113516840 YAPC_PANCREAS 37 Missense_Mutation SNP T C uc001vsj.3 ATP11A_uc001vsi... Hybrid_Cap... view
AURKC 19 57742494 57742507 YAPC_PANCREAS 37 5'UTR Del GGACG... - rs67926438;rs112039303;rs59094959 uc002qoe.2 AURKC_uc002qoc.... Hybrid_Cap...
BCR p.S459L 22 23596082 23596082 YAPC_PANCREAS 37 Missense_Mutation SNP C T uc002zww.2 BCR_uc002zwx.2_... Hybrid_Cap... view
BLNK p.V182M 10 97976472 97976472 YAPC_PANCREAS 37 Missense_Mutation SNP C T uc001kls.3 BLNK_uc001kme.3... Hybrid_Cap... view
CACNB2 10 18828721 18828722 YAPC_PANCREAS 37 3'UTR Ins - AA rs3841459 uc001ipr.2 CACNB2_uc009xjz... Hybrid_Cap...
CIT p.K629_splice 12 120214161 120214161 YAPC_PANCREAS 37 Splice_Site_SNP SNP C A uc001txj.1 CIT_uc001txh.1_... Hybrid_Cap... view
CLTCL1 p.V1201_splice 22 19189003 19189004 YAPC_PANCREAS 37 Splice_Site_Ins Ins - C rs11386977 uc002zpb.2 CLTCL1_uc011agv... Hybrid_Cap...
CNTN6 3 1339681 1339686 YAPC_PANCREAS 37 Intron Del GTTTT... - uc003boz.2 CNTN6_uc010hbo.... Hybrid_Cap...
CREB3L2 p.T100del 7 137612914 137612916 YAPC_PANCREAS 37 In_Frame_Del Del TGG - uc003vtw.2 CREB3L2_uc003vt... Hybrid_Cap...
CYP1A2 p.T438I 15 75047191 75047191 YAPC_PANCREAS 37 Missense_Mutation SNP C T rs45486893 uc002ayr.1 Hybrid_Cap... view
EGF p.E1134fs 4 110932389 110932390 YAPC_PANCREAS 37 Frame_Shift_Ins Ins - C rs11569144 uc003hzy.3 EGF_uc011cfu.1_... Hybrid_Cap...
EML4 p.Q123E 2 42488289 42488289 YAPC_PANCREAS 37 Missense_Mutation SNP C G uc002rsi.2 EML4_uc002rsh.3... Hybrid_Cap... view
EP300 p.G1429_splice 22 41566408 41566408 YAPC_PANCREAS 37 Splice_Site_SNP SNP A T uc003azl.3 Hybrid_Cap... view
EPHA6 3 97367230 97367231 YAPC_PANCREAS 37 Intron Ins - A rs115253553 uc010how.1 EPHA6_uc003drs.... Hybrid_Cap...
EPHB6 p.G54E 7 142561449 142561449 YAPC_PANCREAS 37 Missense_Mutation SNP G A uc011kst.1 EPHB6_uc011ksu.... Hybrid_Cap... view
ERCC5 p.A986G 13 103525686 103525686 YAPC_PANCREAS 37 Missense_Mutation SNP C G uc001vpw.2 Hybrid_Cap... view
ETV1 7 14028708 14028708 YAPC_PANCREAS 37 5'UTR Del A - rs77190713 uc011jxq.1 ETV1_uc011jxn.1... Hybrid_Cap...
FASTK p.R326R 7 150775027 150775027 YAPC_PANCREAS 37 Silent SNP C T uc003wix.1 FASTK_uc003wiw.... Hybrid_Cap... view
FGFR1OP 6 167453519 167453520 YAPC_PANCREAS 37 3'UTR Ins - T rs115519488 uc003qvj.2 CCR6_uc003qvl.2... Hybrid_Cap...
FGFR3 4 1809128 1809129 YAPC_PANCREAS 37 3'UTR Del GT - uc003gdu.2 FGFR3_uc003gdr.... Hybrid_Cap...
FLI1 11 128638217 128638217 YAPC_PANCREAS 37 Intron Del G - uc010sbu.1 FLI1_uc010sbt.1... Hybrid_Cap...
FLT4 5 180035183 180035185 YAPC_PANCREAS 37 Intron Del AGT - uc003mlz.3 FLT4_uc003mma.3... Hybrid_Cap...
FN1 2 216244182 216244185 YAPC_PANCREAS 37 Intron Del GTAC - uc002vfa.2 FN1_uc002vfb.2_... Hybrid_Cap...
GCNT2 p.H256P 6 10529911 10529911 YAPC_PANCREAS 37 Missense_Mutation SNP A C uc010joo.2 GCNT2_uc010jol.... Hybrid_Cap... view
GPR112 p.D2657del X 135474445 135474447 YAPC_PANCREAS 37 In_Frame_Del Del GAT - rs3030295 uc004ezu.1 GPR112_uc010nsb... Hybrid_Cap...
GRIA3 X 122318386 122318387 YAPC_PANCREAS 37 Splice_Site_Ins Ins - G rs66632982 uc004etq.3 GRIA3_uc004etr.... Hybrid_Cap...
HNF1A 12 121434630 121434631 YAPC_PANCREAS 37 Intron Ins - TCATTCAT rs75100977 uc010szn.1 HNF1A_uc001tze.... Hybrid_Cap...
HSP90B1 p.E791del 12 104341188 104341190 YAPC_PANCREAS 37 In_Frame_Del Del GAA - rs117491163 uc001tkb.1 HSP90B1_uc010sw... Hybrid_Cap...
IGF1R 15 99192755 99192763 YAPC_PANCREAS 37 5'UTR Del TTTTT... - uc002bul.2 IGF1R_uc010urq.... Hybrid_Cap...
ILK p.N12N 11 6625537 6625537 YAPC_PANCREAS 37 Silent SNP C T uc001mee.2 RRP8_uc001med.2... Hybrid_Cap... view
ILK 11 6630029 6630029 YAPC_PANCREAS 37 Intron Del C - uc001mee.2 ILK_uc001mef.2_... Hybrid_Cap...
KRAS p.G12V 12 25398284 25398284 YAPC_PANCREAS 37 Missense_Mutation SNP C A uc001rgp.1 KRAS_uc001rgq.1... Hybrid_Cap... view
MAF p.A251T 16 79633049 79633049 YAPC_PANCREAS 37 Missense_Mutation SNP C T uc002ffm.2 MAF_uc002ffn.2_... Hybrid_Cap... view
MAML3 p.Q767_splice 4 140651585 140651587 YAPC_PANCREAS 37 Splice_Site_Del Del CTG - uc003ihz.1 MGST2_uc010ioi.... Hybrid_Cap...
MAP2K6 17 67516353 67516353 YAPC_PANCREAS 37 Intron SNP A T rs77138194 uc002jij.2 MAP2K6_uc002jii... Hybrid_Cap... view
MAP3K1 p.T949del 5 56177849 56177851 YAPC_PANCREAS 37 In_Frame_Del Del CAA - uc003jqw.3 Hybrid_Cap...
MAP3K14 p.R218_splice 17 43364293 43364294 YAPC_PANCREAS 37 Splice_Site_Ins Ins - G rs66766023 uc002iiw.1 MAP3K14_uc010da... Hybrid_Cap...
MAPK9 p.K68N 5 179696328 179696328 YAPC_PANCREAS 37 Missense_Mutation SNP C G uc003mls.3 MAPK9_uc003mlt.... Hybrid_Cap... view
MAST4 p.S1871del 5 66461181 66461183 YAPC_PANCREAS 37 In_Frame_Del Del CTC - uc003jut.1 MAST4_uc003juw.... Hybrid_Cap...
MYC 8 128753244 128753244 YAPC_PANCREAS 37 3'UTR SNP C G uc003ysi.2 Hybrid_Cap... view
MYLK p.E1066del 3 123419117 123419119 YAPC_PANCREAS 37 In_Frame_Del Del TTC - rs72491150 uc003ego.2 MYLK_uc011bjw.1... Hybrid_Cap...
NCAM1 11 112832307 112832308 YAPC_PANCREAS 37 5'UTR Ins - A rs117108942 uc009yyq.1 NCAM1_uc001pno.... Hybrid_Cap...
NCAM1 11 112832340 112832340 YAPC_PANCREAS 37 5'UTR Del C - uc009yyq.1 NCAM1_uc001pno.... Hybrid_Cap...
NCOA2 8 71129001 71129001 YAPC_PANCREAS 37 Splice_Site_SNP SNP T A uc003xyn.1 Hybrid_Cap... view
NEK3 p.K313_splice 13 52718050 52718051 YAPC_PANCREAS 37 Splice_Site_Ins Ins - T rs72514762 uc001vgh.2 NEK3_uc001vgg.2... Hybrid_Cap...
NPM1 5 170837734 170837734 YAPC_PANCREAS 37 3'UTR Del T - uc011dex.1 NPM1_uc003mbi.2... Hybrid_Cap...
NPR1 1 153665919 153665920 YAPC_PANCREAS 37 3'UTR Ins - C rs66682713 uc001fcs.3 NPR1_uc010pdz.1... Hybrid_Cap...
NR1H2 p.176_177insQ 19 50881820 50881821 YAPC_PANCREAS 37 In_Frame_Ins Ins - AAC rs66783852;rs112359270 uc010enw.2 NR1H2_uc002prv.... Hybrid_Cap...
OMG p.G360R 17 29622272 29622272 YAPC_PANCREAS 37 Missense_Mutation SNP C T uc002hgj.2 NF1_uc002hgg.2_... Hybrid_Cap... view
PCDH15 p.AP1770del 10 55582194 55582199 YAPC_PANCREAS 37 In_Frame_Del Del AGGAG... - uc010qhy.1 PCDH15_uc010qhq... Hybrid_Cap...
PIK3C2A 11 17111198 17111199 YAPC_PANCREAS 37 3'UTR Del GT - uc001mmq.3 PIK3C2A_uc009yg... Hybrid_Cap...
PRKDC p.L1244fs 8 48805816 48805817 YAPC_PANCREAS 37 Frame_Shift_Ins Ins - G rs67588121 uc003xqi.2 PRKDC_uc003xqj.... Hybrid_Cap...
PXN p.G422S 12 120652642 120652642 YAPC_PANCREAS 37 Missense_Mutation SNP C T uc001txt.2 PXN_uc001txu.2_... Hybrid_Cap... view
RARB 3 25470118 25470119 YAPC_PANCREAS 37 Intron Ins - A rs11403838 uc011awl.1 RARB_uc003cdi.1... Hybrid_Cap...
RASGRF1 15 79277150 79277151 YAPC_PANCREAS 37 Intron Ins - C rs67045840;rs77640668 uc002beq.2 RASGRF1_uc002be... Hybrid_Cap...
RECQL4 p.R766fs 8 145738768 145738768 YAPC_PANCREAS 37 Frame_Shift_Del Del G - uc003zdj.2 Hybrid_Cap...
ROBO2 3 77666937 77666937 YAPC_PANCREAS 37 Intron Del A - rs78745603 uc003dpz.2 ROBO2_uc003dpy.... Hybrid_Cap...
ROR2 p.G49V 9 94538052 94538052 YAPC_PANCREAS 37 Missense_Mutation SNP C A uc004arj.1 ROR2_uc004ari.1... Hybrid_Cap... view
RPS6KA5 14 91360733 91360734 YAPC_PANCREAS 37 Intron Ins - T rs77438853 uc001xys.2 RPS6KA5_uc010tw... Hybrid_Cap...
STAT5A 17 40462797 40462800 YAPC_PANCREAS 37 3'UTR Del TGTG - uc002hzj.1 STAT5A_uc010cya... Hybrid_Cap...
TCF12 15 57544456 57544456 YAPC_PANCREAS 37 Intron SNP G A uc002aea.2 TCF12_uc010ugm.... Hybrid_Cap... view
TEC 4 48139307 48139310 YAPC_PANCREAS 37 3'UTR Del TTAT - rs79098351 uc003gxz.2 Hybrid_Cap...
TGS1 p.A815T 8 56737143 56737143 YAPC_PANCREAS 37 Missense_Mutation SNP G A uc003xsj.3 TGS1_uc010lyh.2... Hybrid_Cap... view
TNFRSF1B p.R309G 1 12262048 12262048 YAPC_PANCREAS 37 Missense_Mutation SNP C G uc001att.2 TNFRSF1B_uc001a... Hybrid_Cap... view
TP53 p.H179R 17 7578394 7578394 YAPC_PANCREAS 37 Missense_Mutation SNP T C uc002gim.2 TP53_uc002gig.1... Hybrid_Cap... view
TP63 3 189507518 189507519 YAPC_PANCREAS 37 Intron Ins - AGAG rs62702062;rs79714037 uc003fry.2 TP63_uc003frx.2... Hybrid_Cap...
TRIM33 1 114940202 114940203 YAPC_PANCREAS 37 3'UTR Ins - TT uc001eew.2 TRIM33_uc010owr... Hybrid_Cap...
TRIM33 1 114940211 114940212 YAPC_PANCREAS 37 3'UTR Ins - T rs66490349 uc001eew.2 TRIM33_uc010owr... Hybrid_Cap...
TRPS1 8 116635872 116635873 YAPC_PANCREAS 37 5'UTR Ins - A rs76893349 uc003yny.2 TRPS1_uc011lhy.... Hybrid_Cap...
TTN 2 179391639 179391640 YAPC_PANCREAS 37 3'UTR Ins - T rs36037175 uc010zfg.1 TTN_uc010zfh.1_... Hybrid_Cap...
TTN p.R11193H 2 179501172 179501172 YAPC_PANCREAS 37 Missense_Mutation SNP C T uc010zfg.1 TTN_uc010zfh.1_... Hybrid_Cap... view
UBE3B 12 109947357 109947358 YAPC_PANCREAS 37 Intron Ins - T uc001top.2 UBE3B_uc001toq.... Hybrid_Cap...
VEGFC p.S419_splice 4 177605082 177605084 YAPC_PANCREAS 37 Splice_Site_Del Del TCA - uc003ius.1 Hybrid_Cap...
ZNF276 16 89805176 89805191 YAPC_PANCREAS 37 3'UTR Del AGGGG... - uc002fos.3 ZNF276_uc010ciq... Hybrid_Cap...