Sorry. Only registered users have full access to the data or functions on this page.Terms of Access  Register

Browse Data

Data Type

check all   uncheck all


Cancer Cell Line Encyclopedia (57.5GB)

     Include previously released (deprecated) files

DNA Copy Number  (41.6GB) Affy SNP  (Published) 

Affymetrix SNP6.0 arrays.
Raw Affymetrix CEL files were converted to a single value for each probe set representing a SNP allele or a copy number probe. Copy numbers were then inferred based upon estimating probe set specific linear calibration curves, followed by normalization by the most similar HapMap normal samples. Segmentation of normalized log2 ratios (specifically, log2(CN/2)) was performed using the circular binary segmentation (CBS) algorithm.

Show Available Data

mRNA expression  (8.0GB) Gene expression  (Published) 

Affymetrix U133+2 arrays.
Raw Affymetrix CEL files were converted to a single value for each probe set using Robust Multi-array Average (RMA) and normalized using quantile normalization. Either the original Affymetrix U133+2 CDF file or a redefined custom CDF file (ENTREZG - v15) was used for the summarization.

Show Available Data

Cell Line Annotations  (196.1KB) Sample annotation  (Published) 

Show Available Data

Oncomap mutations  (464.8KB) Mutation  (Published) 

Oncomap mutation data.
The mutations were assessed in 33 genes (381 specific mutations) using Oncomap 3.0 core. See the associated publication.

Show Available Data

Hybrid capture sequencing  (6.5GB) Mutation  (In process) 

List of mutations and indels in 1651 genes, determined by targeted massively parallel sequencing. Note: the hybrid capture process might yield sequences in genes outside of the target list; those were kept in the analysis and mutations in these genes are present in the files below.

Show Available Data

Pharmacological profiling  (8.0MB) Drug data  (Published) 

Pharmacologic profiles for 24 anticancer drugs across 504 cell lines.

Show Available Data

Publication specific data files  (287.8MB) Mutation  (In process) 

specific subsets of CCLE data processed and used in Achilles and Revealer papers.

Show Available Data

RNAseq data  (870.3MB) Gene expression  (Published) 

RNAseq profiling of 1019 cell lines

Show Available Data

Merged mutation calls  (255.8MB) Mutation  (Published) 

Merged mutation and indel calls

Show Available Data