Nucleotide Global Alignment
Description
- Query:
- TRCN0000465309
- Subject:
- XM_006538377.1
- Aligned Length:
- 5876
- Identities:
- 1167
- Gaps:
- 4561
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGCTTGCTAGGGTCCGGCTCTGGGCACCGAAGGACCTTTCCCTCTCAGGATGGCCAGGGTGGCATTCCAAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTGGAGCAAAGCGAACAGCTGTGACCTTCCTTTAAAAATGAAGAAAGAGGCAGAAAGCAGCCCTGCTCGTTTTT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTATCCCCACCCCCACCCCCGGACACATCGTGCTGCCTGGACGGCGCTTGGCTGACCCTAGAGGGAGGAGCAGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGGGTGCTGGGGCGGGGTCGCCCAGCCACCGGGCGGGGACTGCCCCACTCACGCGGAACGCCCCCAGCCAGGCG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CACGCGCTCCCATTCAAAGCAGCAGGGCTGCAAGGCCGCTGCAGTGACGCGCCCACCCGGCCCTGTGCTGCGCC 370
Query 1 -----------------------------------------------ATGG-AATGCTGCCGTCGGGCAAC--- 23
|||| ||.||||..|.||.|.|||
Sbjct 371 TGCCAGCCTGGGGTCCGCAGTTATCGCTCCACAACTCCTCCAGGACCATGGCAAGGCTGGTGACGCGTAACCGC 444
Query 24 -------TCCTGGCACAC--------TG-----------CTCCTCTTTCTGGC--------------------- 50
|||||||.|.| || |||||||.|.|.||
Sbjct 445 CCCGGGTTCCTGGCTCGCCTCATCGGTGGCATCTGGTGCCTCCTCTGTGTCGCAGGACAGGTATGTGGAGACCA 518
Query 51 ---------------TTTCCTG------------CT-------------------------------------- 59
||||||| ||
Sbjct 519 AAGCCAAGGGGCTGTTTTCCTGAGGGAATTTACACTGATTCGAAGAGAGAGCCTTCATGAAGAGTTCCTGTCTG 592
Query 60 ----------------------------CCTGAGTTCCAGGACCGCACGCTCCGAGGAGGACCGGGACGGCCTA 105
||.||||||||||||.||||||||.|||||.|||||.||.|||||.
Sbjct 593 ACTTCTTGAATAGTCACAAAACTGAAGACCCGAGTTCCAGGACTGCACGCTCAGAGGAAGACCGTGAAGGCCTC 666
Query 106 TGGGATGCCTGGGGCCCATGGAGTGAATGCTCACGCACCTGCGGGGGAGGGGCCTCCTACTCTCTGAGGCGCTG 179
|||||||||||||||||.|||||.||.||.||..|.|||||.||.||.||.||||||||.||.|||||.|||||
Sbjct 667 TGGGATGCCTGGGGCCCTTGGAGCGAGTGTTCCAGAACCTGTGGTGGGGGTGCCTCCTATTCCCTGAGACGCTG 740
Query 180 CCTGAGCAGCAAGAGCTGTGAAGGAAGAAATATCCGATACAGAACATGCAGTAATGTGGACTGCCCACCAGAAG 253
||||||||||||||||||||||||.||||||||.|||||.||||||||||||||||||||||||||||||||||
Sbjct 741 CCTGAGCAGCAAGAGCTGTGAAGGGAGAAATATTCGATATAGAACATGCAGTAATGTGGACTGCCCACCAGAAG 814
Query 254 CAGGTGATTTCCGAGCTCAGCAATGCTCAGCTCATAATGATGTCAAGCACCATGGCCAGTTTTATGAATGGCTT 327
|||||||||||||||||||.||.||.||.||||||||.||.||||||.|||||||.|||.||||||||||||||
Sbjct 815 CAGGTGATTTCCGAGCTCAACAGTGTTCTGCTCATAACGACGTCAAGTACCATGGACAGCTTTATGAATGGCTT 888
Query 328 CCTGTGTCTAATGACCCTGACAACCCATGTTCACTCAAGTGCCAAGCCAAAGGAACAACCCTGGTTGTTGAACT 401
|||||.|||||||||||.|||||.|||||.|||||||||||||||||.||||||||.|.|||||||||.|||||
Sbjct 889 CCTGTATCTAATGACCCCGACAATCCATGCTCACTCAAGTGCCAAGCAAAAGGAACCAGCCTGGTTGTGGAACT 962
Query 402 AGCACCTAAGGTCTTAGATGGTACGCGTTGCTATACAGAATCTTTGGATATGTGCATCAGTGGTTTATGCCAAA 475
||||||.||||||||||||||||||||.||||||||||||||..||||||||||||||||.||..|||||||||
Sbjct 963 AGCACCGAAGGTCTTAGATGGTACGCGATGCTATACAGAATCACTGGATATGTGCATCAGCGGCCTATGCCAAA 1036
Query 476 TTGTTGGCTGCGATCACCAGCTGGGAAGCACCGTCAAGGAAGATAACTGTGGGGTCTGCAACGGAGATGGGTCC 549
||||||||||.||||||||||||||.|||||.|||||.||.|||||||||||.||.||||||||||||||.||.
Sbjct 1037 TTGTTGGCTGTGATCACCAGCTGGGGAGCACTGTCAAAGAGGATAACTGTGGAGTGTGCAACGGAGATGGCTCA 1110
Query 550 ACCTGCCGGCTGGTCCGAGGGCAGTATAAATCCCAGCTCTCCGCAACCAAATCGGATGATACTGTGGTTGCAAT 623
||.|||||||||||||||||||||||||||||.||||||||.||||..|||||||||||.||.|||||.||.||
Sbjct 1111 ACGTGCCGGCTGGTCCGAGGGCAGTATAAATCTCAGCTCTCTGCAAGTAAATCGGATGACACCGTGGTCGCCAT 1184
Query 624 TCCCTATGGAAGTAGACATATTCGCCTTGTCTTAAAAGGTCCTGATCACTTATATCTGGAAACCAAAACCCTCC 697
|||.||.||.||.|||||.||.|||||||||||||||||.||.|||||.||.||||||||.|||||.|||||||
Sbjct 1185 TCCTTACGGCAGCAGACACATCCGCCTTGTCTTAAAAGGGCCAGATCATTTGTATCTGGAGACCAAGACCCTCC 1258
Query 698 AGGGGACTAAAGGTGAAAACAGTCTCAGCTCCACAGGAACTTTCCTTGTGGACAATTCTAGTGTGGACTTCCAG 771
||||.||||||||||||||.|||||.|||||.|||||.|.||||||||||||||||||||..||||||||||||
Sbjct 1259 AGGGAACTAAAGGTGAAAATAGTCTGAGCTCTACAGGCATTTTCCTTGTGGACAATTCTACAGTGGACTTCCAG 1332
Query 772 AAATTTCCAGACAAAGAGATACTGAGAATGGCTGGACCACTCACAGCAGATTTCATTGTCAAGATTCGTAACTC 845
|||.||||||||||||||||||||||.|||.||||.|||||.||||||||||||||..|||||||.|.|.|||.
Sbjct 1333 AAACTTCCAGACAAAGAGATACTGAGGATGACTGGGCCACTGACAGCAGATTTCATCATCAAGATCCATGACTT 1406
Query 846 GGGCTCCGCTGACAGTACAGTCCAGTTCATCTTCTATCAACCCATCATCCACCGATGGAGGGAGACGGATTTCT 919
|||..|.||.|||||.||.|||||||||||||||||.||.|||||||||||||||||||||||.||.||.||||
Sbjct 1407 GGGACCTGCAGACAGCACCGTCCAGTTCATCTTCTACCAGCCCATCATCCACCGATGGAGGGAAACAGACTTCT 1480
Query 920 TTCCTTGCTCAGCAACCTGTGGAGGAGGTTATCAGCTGACATCGGCTGAGTGCTACGATCTGAGGAGCAACCGT 993
||||||||||||||||.|||||.|||||.||.||||||||.||.||.||||||||.|||||..||||.||||||
Sbjct 1481 TTCCTTGCTCAGCAACGTGTGGTGGAGGCTACCAGCTGACGTCTGCCGAGTGCTATGATCTACGGAGTAACCGT 1554
Query 994 GTGGTTGCTGACCAATACTGTCACTATTACCCAGAGAACATCAAACCCAAACCCAAGCTTCAGGAGTGCAACTT 1067
|||||.||.|||||.|||||||||||.|||||.||||||.||||.|||||||||||||||||||||||||||||
Sbjct 1555 GTGGTGGCCGACCAGTACTGTCACTACTACCCCGAGAACGTCAAGCCCAAACCCAAGCTTCAGGAGTGCAACTT 1628
Query 1068 GGATCCTTGTCCAGCCA---------------------------------------------------GGTGGG 1090
||||||||||||||||| ||||||
Sbjct 1629 GGATCCTTGTCCAGCCAGTGACGGATACAAGCAGATCATGCCTTATGACCTCTACCATCCCCTTCCTCGGTGGG 1702
Query 1091 AGGCCACCCCATGGACCGCGTGCTCCTCCTCGTGTGGGGGGGGCATCCAGAGCCGGGCAGTTTCCTGTGTGGAG 1164
||||||||||.||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 AGGCCACCCCGTGGACCGCGTGCTCCTCCTCATGTGGGGGGGGCATCCAGAGCCGGGCAGTTTCCTGTGTGGAG 1776
Query 1165 GAGGACATCCAGGGGCATGTCACTTCAGTGGAAGAGTGGAAATGCATGTACACCCCTAAGATGCCCATCGCGCA 1238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||..|||.|||
Sbjct 1777 GAGGACATCCAGGGGCATGTCACTTCAGTGGAAGAGTGGAAATGCATGTACACCCCAAAGATGCCAGTCGTGCA 1850
Query 1239 GCCCTGCAACATTTTTGACTGCCCTAAATGGCTGGCACAGGAGTGGTCTCCG------GT-AACTGT------- 1298
|||||||||||||||||||||||||||||||||||||||||||||||||||| || |.||||
Sbjct 1851 GCCCTGCAACATTTTTGACTGCCCTAAATGGCTGGCACAGGAGTGGTCTCCGTGCACAGTGACCTGTGGCCAGG 1924
Query 1299 GCCT-----------TCTTTCTTTGTTCAT-------------------------------------------- 1317
|||| |..|.||.|| |||
Sbjct 1925 GCCTCAGATACCGCGTGGTACTCTG--CATTGACCACCGAGGAATGCACACAGGAGGCTGCAGTGCTAAAACAA 1996
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1997 AGCCCCACATAAAAGAAGAATGCATCATTCCCACACCGTGCTACAAGCCCAGAGAGAAACTTCCAATAGAGGCC 2070
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2071 AAGCTGCCATGGTTCAAGCAAGCCCAGGAGCTAGAGGAAGGAGCTGCAGTGTCTGAAGAGCCTTCGTTCATCCC 2144
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2145 AGAAGCTTGGTCGGCCTGTACTGTCACCTGTGGCGTGGGGACACAGGTGCGAATAATAAGATGCCAGGTGCTCC 2218
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2219 TGCCTTTCTCTCAGTCTGTGGCTGACCTGCCTGCGGATGAATGCGAAGGGCCTAAGCCAGCATCGCAACGTGCC 2292
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2293 TGTTATGCGGGACCGTGCAACGGGGAAACTCCGGAATTTAACCCGGATAACGGAGACGGACTCTTGGGTGGCCT 2366
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2367 GCAGGACCTGGACGAGCTGTATGACTGGGAATATGAGGGCTTCACCAAGTGCTCTGAGTCATGTGGAGGAGGTG 2440
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2441 TCCAGGAGGCTGTGGTAAGCTGCCTGAACAAACAGACCCGGGAACTCGCTGATGAGAACCTGTGTGTGACCAGC 2514
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2515 CGACGGCCCCCGCAGCTCCTGAAATCCTGTAACTTGGATCCCTGCCCAGCAAGGTGGGAAATTGGCAAGTGGAG 2588
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2589 CCCATGTAGCCTCACCTGTGGGGTTGGCCTGCAGACCAGAGATGTTGTCTGTTCCCACCTACTCTCCAGAGAGA 2662
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2663 TGAACGAGGTGGTTGTCCTGGCCGATGAGCTGTGCCATCACCCCAAACCCAGCACAGTGCAAGCCTGCAACCGT 2736
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2737 TTCAATTGCCCCCCAGCCTGGTACCCTGCACAGTGGCAGCTGTGTTCCAGGACCTGTGGAGGAGGGATTCAGAA 2810
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2811 ACGTGATGTTCTCTGCAAGCAGCGTATGGCTGACGGCAGCTTCCTGGAGCTTCCAGAGACCTTCTGTTCTGCCT 2884
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2885 CCAAACCAACCTCCCACCAAGGGTGCAAGAAAGATGACTGCCCCAGTGAGTGGCTTCTCTCAGAGTGGTCAGAG 2958
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2959 TGCTCTGTGAGCTGTGGGGAGGGCACCCAGACTCGAAGTGCCATTTGCCAGAGGGTGCTGAAAACTGGGGTCTC 3032
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3033 CACTGTTGTCAATTCTACTTTGTGCCCTCCCCTGCCCTTCTCTTCCTCCATCAGACCCTGTATGCTGGCAACCT 3106
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3107 GTGCAAGGCCTGGAAGGCCTTCCACCAAGCACAGTCCTCACATCGCAGCTGCACGAAACATATACATCCAGACC 3180
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3181 CGCAGGCAGAGGAAGCTGCACTTCGTTGTGGGAGGATTTGCTTACCTGCTTCCCAAGACTACCGTGGTGCTCCG 3254
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3255 GTGTCCCACACGCAGATTCCGCAAGCCCCTCATCACGTGGGAAAAGGACGGCCAGCACAGCATCAGCTCGGCTC 3328
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3329 ATGTCACCGTAGCCCCTTTTGGCTACCTGAAGATCCATCGCCTCAAGCCCTCAGATGCGGGCATCTACACCTGT 3402
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3403 TCTGCGGGGCCCGCCCGGGAGCAGTTTGTGATTAAGCTCATTGGAGGCAACCGCAAGCTCGTGGCCAGGCCCCT 3476
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3477 GAGCCTTTGGAGTGAGGAAGAGGAGGCCCTGCAGGTGAGGAAGACCAATCCAAAAGAAGCCTTGCAAACCCACA 3550
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3551 AACACCAAAATGGCATCTTCTCCAACGGCAGCAAAGCTGAGAAGCGCGGCCTCACTGCAGATCCTGGGAACCGC 3624
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3625 TATGATGACATTGTGTCTAGGCTGTTGGAGCAGGGCGGCTGGCCAGGAGAGCTCCTGGCCTCGTGGGAGGTGCA 3698
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3699 GGACTCTGCAGAAAGGAACGCATCCTCAGAAGAGGATCCCAATGCTGAACAGGCCCTCCTGCATCTCCCCTTCA 3772
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3773 CCATGGTGGCCGAGCAGAAGCGTCTGGATGACATCCTCAGGAACCTGTCCCAGCAGCCAGAGGAGCTACGGGAC 3846
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3847 CTCTACAGCAAGCACCTGGTGGCCCAGCTGGCCCAGGACATCTTCCGAAGCCACCTGGAGAACCAGGATCTGCT 3920
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3921 TCCTAAGCCCTCTGAGCAGAGGTTTCCTCCCATGGCCGTCCCAGCTCACAAACATGTCTCTGGCTTCAGCAGCT 3994
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3995 CCCTAAGGAGCTCATCTGGAGAGGCTGGAGGTGGCTCCCGTAGGCCTCATCGCAAGCCCGCCATCTTGCGGAAG 4068
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4069 ATCTCAGCGGCACAGCAACTCTCAGCCTCGGAGGTAGTCACCCACCTGGGGCAGACTGTGGCTCTAGCCAGTGG 4142
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4143 GACCCTGAGTGTGCTTCTGCACTGTGAGGCGGTAGGCAACCCAAGGCCCACCATCCACTGGACCAGGAACGGAG 4216
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4217 AAGCAGTTCAATTCAGTGACAGGATTCTTCTACAGCCAGATGATTCCTTACAGATCTTGGCACCAGTGGAAGCT 4290
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4291 GATGTGGGTTTCTATACTTGCAATGCCACAAATGCCTTGGGATATGACTCTGTCTCCATTGCTGTCACATTAGC 4364
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4365 AGGAAAGCCACTAGTGAAGACATCCCGAATGACTGTGCTCAACACAGAGAAGCCTACAGTCACAGTGGATATCG 4438
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4439 GTGGCACCGTCAGAACCGTCCGAGGAGTGAATGTGACAATTAACTGCCAAGTGGCAGGTGTACCTGAAGCTGAA 4512
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4513 GTCACCTGGTTCAGAAATAAAAGCAAATTGGGCTCCTCCCACCACCTGCATGAGGGCTCCTCCCACCACCTGCA 4586
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4587 TGAGGGCTCCTTGCTGCTCACAGATGTGTCCTTCTCTGATCAAGGCCTGTATTCCTGCAGGGCAGCCAATCTAC 4660
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4661 ACGGAGAACAGACAGAGAGCACGCAGCTCCTGATTCTAGATCCCCCGCAAGTCCCCACACAGTTGGAAGACATC 4734
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4735 AGGGCCTTGCTCTTAGCCACTGGACCGAACCTTCCTTCGGTGCTTATGTCCCCTCTGGGAACACAGCTGGTCCT 4808
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4809 GGATCCTGGGAATTCCGCTCTCCTTGGCTGCCCCATCAAAGGTCACCCCACCCCCAATATCACCTGGTTCCAAA 4882
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4883 ATGGCCAGCCAATTGCCACTGCCCCGGGGCTGACCCACCACATCTGGGGAGCTGGACAGATCCTACGAGTTGCA 4956
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4957 AATCTCAGTGGAGGACCTCAAGGGGAGTTCAGCTGCCTGGCTCAGAATGAAGCAGGGACCCTCCTGCAGAAAGC 5030
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 5031 CTCTTTGGTGATCCAAGATTACTGGTGGTCTGTGGATAGACTGGCAACCTGCTCCGCATCTTGTGGTAATAGAG 5104
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 5105 GCATTCATCAGCCGCGACTCAGGTGTTTACTGAACACCACGGAAGTTGACCCTGAGCACTGTACAGGAAAGCCT 5178
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 5179 CGGCCCGCCGTGCAGCCTGTTGCCTGCAACCGGAGAGACTGTCCTTCTCGATGGATGGTGACGTCCTGGTCCGC 5252
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 5253 CTGTACCCGGAGTTGCGGTGGAGGTGTACAAACCCGAAGGGTGACCTGTCAGAAGTTGAAAGCTTCTGGTATTT 5326
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 5327 CTACCCCGGTGTCCAATGACATGTGCAGTCAACTGGCCAAACGGCCTGTGGACACCCAGGCCTGCAACCAGCAG 5400
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 5401 CTCTGTGTGGAATGGGCCTTCTCCAGCTGGGGCCAGTGCAATGGGCCTTGCATAGGCCCTCGCCTTGCTGTGCA 5474
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 5475 GCACAGGCAGGTCTTCTGCCAGACCCGGGATGGCATCACCTTACCATCAGAGCAGTGCAGTGCCCTCCCCAGGC 5548
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 5549 CCGTGAGCACCCAAAACTGCTGGTCAGAGGCCTGCAGTGTACACTGGAGAGTCAGCCTCTGGACCCTATGCACG 5622
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 5623 GCAACCTGTGGCAACTATGGCTTCCAGTCCCGGCGGGTGGAGTGTGTTCACGTGCGCACCAACAAGGCTGTGCC 5696
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 5697 CGAGCACCTGTGTTCCTGGGGGCCCCGGCCCGCCAACTGGCAACGCTGCAACGTCACTCCATGTGAAAACAGTA 5770
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 5771 CGTTCCAATCCCAAAGAACATTCTGCAAATTCCCTACAGGCCATCGGGTACAGAGGGCAATCCCTGGGACTGAG 5844
Query 1318 ------------------------------ 1317
Sbjct 5845 CCTGAACACAGGGCACTGGATCAAGTTCCC 5874