Nucleotide Global Alignment
Description
- Query:
- TRCN0000465309
- Subject:
- XM_006538378.3
- Aligned Length:
- 5315
- Identities:
- 1174
- Gaps:
- 4000
Alignment
Query 1 ATGGAATGCTGCCGTCGGGCAACTCCTGGCACACTGCTCCTCTTTCTGGCTTTCCTGCTCCTGAGTTCCAGGAC 74
|||||||||||||||||||||.||||||||||||.|||.|||.|||||||||||||.|||||||||||||||||
Sbjct 1 ATGGAATGCTGCCGTCGGGCAGCTCCTGGCACACCGCTGCTCGTTCTGGCTTTCCTACTCCTGAGTTCCAGGAC 74
Query 75 CGCACGCTCCGAGGAGGACCGGGACGGCCTATGGGATGCCTGGGGCCCATGGAGTGAATGCTCACGCACCTGCG 148
.||||||||.|||||.|||||.||.|||||.|||||||||||||||||.|||||.||.||.||..|.|||||.|
Sbjct 75 TGCACGCTCAGAGGAAGACCGTGAAGGCCTCTGGGATGCCTGGGGCCCTTGGAGCGAGTGTTCCAGAACCTGTG 148
Query 149 GGGGAGGGGCCTCCTACTCTCTGAGGCGCTGCCTGAGCAGCAAGAGCTGTGAAGGAAGAAATATCCGATACAGA 222
|.||.||.||||||||.||.|||||.|||||||||||||||||||||||||||||.||||||||.|||||.|||
Sbjct 149 GTGGGGGTGCCTCCTATTCCCTGAGACGCTGCCTGAGCAGCAAGAGCTGTGAAGGGAGAAATATTCGATATAGA 222
Query 223 ACATGCAGTAATGTGGACTGCCCACCAGAAGCAGGTGATTTCCGAGCTCAGCAATGCTCAGCTCATAATGATGT 296
||||||||||||||||||||||||||||||||||||||||||||||||||.||.||.||.||||||||.||.||
Sbjct 223 ACATGCAGTAATGTGGACTGCCCACCAGAAGCAGGTGATTTCCGAGCTCAACAGTGTTCTGCTCATAACGACGT 296
Query 297 CAAGCACCATGGCCAGTTTTATGAATGGCTTCCTGTGTCTAATGACCCTGACAACCCATGTTCACTCAAGTGCC 370
||||.|||||||.|||.|||||||||||||||||||.|||||||||||.|||||.|||||.|||||||||||||
Sbjct 297 CAAGTACCATGGACAGCTTTATGAATGGCTTCCTGTATCTAATGACCCCGACAATCCATGCTCACTCAAGTGCC 370
Query 371 AAGCCAAAGGAACAACCCTGGTTGTTGAACTAGCACCTAAGGTCTTAGATGGTACGCGTTGCTATACAGAATCT 444
||||.||||||||.|.|||||||||.|||||||||||.||||||||||||||||||||.||||||||||||||.
Sbjct 371 AAGCAAAAGGAACCAGCCTGGTTGTGGAACTAGCACCGAAGGTCTTAGATGGTACGCGATGCTATACAGAATCA 444
Query 445 TTGGATATGTGCATCAGTGGTTTATGCCAAATTGTTGGCTGCGATCACCAGCTGGGAAGCACCGTCAAGGAAGA 518
.||||||||||||||||.||..|||||||||||||||||||.||||||||||||||.|||||.|||||.||.||
Sbjct 445 CTGGATATGTGCATCAGCGGCCTATGCCAAATTGTTGGCTGTGATCACCAGCTGGGGAGCACTGTCAAAGAGGA 518
Query 519 TAACTGTGGGGTCTGCAACGGAGATGGGTCCACCTGCCGGCTGGTCCGAGGGCAGTATAAATCCCAGCTCTCCG 592
|||||||||.||.||||||||||||||.||.||.|||||||||||||||||||||||||||||.||||||||.|
Sbjct 519 TAACTGTGGAGTGTGCAACGGAGATGGCTCAACGTGCCGGCTGGTCCGAGGGCAGTATAAATCTCAGCTCTCTG 592
Query 593 CAACCAAATCGGATGATACTGTGGTTGCAATTCCCTATGGAAGTAGACATATTCGCCTTGTCTTAAAAGGTCCT 666
|||..|||||||||||.||.|||||.||.|||||.||.||.||.|||||.||.|||||||||||||||||.||.
Sbjct 593 CAAGTAAATCGGATGACACCGTGGTCGCCATTCCTTACGGCAGCAGACACATCCGCCTTGTCTTAAAAGGGCCA 666
Query 667 GATCACTTATATCTGGAAACCAAAACCCTCCAGGGGACTAAAGGTGAAAACAGTCTCAGCTCCACAGGAACTTT 740
|||||.||.||||||||.|||||.|||||||||||.||||||||||||||.|||||.|||||.|||||.|.|||
Sbjct 667 GATCATTTGTATCTGGAGACCAAGACCCTCCAGGGAACTAAAGGTGAAAATAGTCTGAGCTCTACAGGCATTTT 740
Query 741 CCTTGTGGACAATTCTAGTGTGGACTTCCAGAAATTTCCAGACAAAGAGATACTGAGAATGGCTGGACCACTCA 814
|||||||||||||||||..|||||||||||||||.||||||||||||||||||||||.|||.||||.|||||.|
Sbjct 741 CCTTGTGGACAATTCTACAGTGGACTTCCAGAAACTTCCAGACAAAGAGATACTGAGGATGACTGGGCCACTGA 814
Query 815 CAGCAGATTTCATTGTCAAGATTCGTAACTCGGGCTCCGCTGACAGTACAGTCCAGTTCATCTTCTATCAACCC 888
|||||||||||||..|||||||.|.|.|||.|||..|.||.|||||.||.|||||||||||||||||.||.|||
Sbjct 815 CAGCAGATTTCATCATCAAGATCCATGACTTGGGACCTGCAGACAGCACCGTCCAGTTCATCTTCTACCAGCCC 888
Query 889 ATCATCCACCGATGGAGGGAGACGGATTTCTTTCCTTGCTCAGCAACCTGTGGAGGAGGTTATCAGCTGACATC 962
||||||||||||||||||||.||.||.||||||||||||||||||||.|||||.|||||.||.||||||||.||
Sbjct 889 ATCATCCACCGATGGAGGGAAACAGACTTCTTTCCTTGCTCAGCAACGTGTGGTGGAGGCTACCAGCTGACGTC 962
Query 963 GGCTGAGTGCTACGATCTGAGGAGCAACCGTGTGGTTGCTGACCAATACTGTCACTATTACCCAGAGAACATCA 1036
.||.||||||||.|||||..||||.|||||||||||.||.|||||.|||||||||||.|||||.||||||.|||
Sbjct 963 TGCCGAGTGCTATGATCTACGGAGTAACCGTGTGGTGGCCGACCAGTACTGTCACTACTACCCCGAGAACGTCA 1036
Query 1037 AACCCAAACCCAAGCTTCAGGAGTGCAACTTGGATCCTTGTCCAGCCA-------------------------- 1084
|.||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 AGCCCAAACCCAAGCTTCAGGAGTGCAACTTGGATCCTTGTCCAGCCAGTGACGGATACAAGCAGATCATGCCT 1110
Query 1085 -------------------------GGTGGGAGGCCACCCCATGGACCGCGTGCTCCTCCTCGTGTGGGGGGGG 1133
||||||||||||||||.||||||||||||||||||||.|||||||||||
Sbjct 1111 TATGACCTCTACCATCCCCTTCCTCGGTGGGAGGCCACCCCGTGGACCGCGTGCTCCTCCTCATGTGGGGGGGG 1184
Query 1134 CATCCAGAGCCGGGCAGTTTCCTGTGTGGAGGAGGACATCCAGGGGCATGTCACTTCAGTGGAAGAGTGGAAAT 1207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CATCCAGAGCCGGGCAGTTTCCTGTGTGGAGGAGGACATCCAGGGGCATGTCACTTCAGTGGAAGAGTGGAAAT 1258
Query 1208 GCATGTACACCCCTAAGATGCCCATCGCGCAGCCCTGCAACATTTTTGACTGCCCTAAATGGCTGGCACAGGAG 1281
|||||||||||||.||||||||..|||.||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 GCATGTACACCCCAAAGATGCCAGTCGTGCAGCCCTGCAACATTTTTGACTGCCCTAAATGGCTGGCACAGGAG 1332
Query 1282 TGGTCTCCG------GT-AACTGT-------GCCT-----------TCTTTCTTTGTTCAT------------- 1317
||||||||| || |.|||| |||| |..|.||.|| |||
Sbjct 1333 TGGTCTCCGTGCACAGTGACCTGTGGCCAGGGCCTCAGATACCGCGTGGTACTCTG--CATTGACCACCGAGGA 1404
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1405 ATGCACACAGGAGGCTGCAGTGCTAAAACAAAGCCCCACATAAAAGAAGAATGCATCATTCCCACACCGTGCTA 1478
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1479 CAAGCCCAGAGAGAAACTTCCAATAGAGGCCAAGCTGCCATGGTTCAAGCAAGCCCAGGAGCTAGAGGAAGGAG 1552
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1553 CTGCAGTGTCTGAAGAGCCTTCGTTCATCCCAGAAGCTTGGTCGGCCTGTACTGTCACCTGTGGCGTGGGGACA 1626
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1627 CAGGTGCGAATAATAAGATGCCAGGTGCTCCTGCCTTTCTCTCAGTCTGTGGCTGACCTGCCTGCGGATGAATG 1700
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1701 CGAAGGGCCTAAGCCAGCATCGCAACGTGCCTGTTATGCGGGACCGTGCAACGGGGAAACTCCGGAATTTAACC 1774
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1775 CGGATAACGGAGACGGACTCTTGGGTGGCCTGCAGGACCTGGACGAGCTGTATGACTGGGAATATGAGGGCTTC 1848
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1849 ACCAAGTGCTCTGAGTCATGTGGAGGAGGTGTCCAGGAGGCTGTGGTAAGCTGCCTGAACAAACAGACCCGGGA 1922
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1923 ACTCGCTGATGAGAACCTGTGTGTGACCAGCCGACGGCCCCCGCAGCTCCTGAAATCCTGTAACTTGGATCCCT 1996
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1997 GCCCAGCAAGGTGGGAAATTGGCAAGTGGAGCCCATGTAGCCTCACCTGTGGGGTTGGCCTGCAGACCAGAGAT 2070
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2071 GTTGTCTGTTCCCACCTACTCTCCAGAGAGATGAACGAGGTGGTTGTCCTGGCCGATGAGCTGTGCCATCACCC 2144
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2145 CAAACCCAGCACAGTGCAAGCCTGCAACCGTTTCAATTGCCCCCCAGCCTGGTACCCTGCACAGTGGCAGCTGT 2218
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2219 GTTCCAGGACCTGTGGAGGAGGGATTCAGAAACGTGATGTTCTCTGCAAGCAGCGTATGGCTGACGGCAGCTTC 2292
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2293 CTGGAGCTTCCAGAGACCTTCTGTTCTGCCTCCAAACCAACCTCCCACCAAGGGTGCAAGAAAGATGACTGCCC 2366
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2367 CAGTGAGTGGCTTCTCTCAGAGTGGTCAGAGTGCTCTGTGAGCTGTGGGGAGGGCACCCAGACTCGAAGTGCCA 2440
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2441 TTTGCCAGAGGGTGCTGAAAACTGGGGTCTCCACTGTTGTCAATTCTACTTTGTGCCCTCCCCTGCCCTTCTCT 2514
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2515 TCCTCCATCAGACCCTGTATGCTGGCAACCTGTGCAAGGCCTGGAAGGCCTTCCACCAAGCACAGTCCTCACAT 2588
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2589 CGCAGCTGCACGAAACATATACATCCAGACCCGCAGGCAGAGGAAGCTGCACTTCGTTGTGGGAGGATTTGCTT 2662
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2663 ACCTGCTTCCCAAGACTACCGTGGTGCTCCGGTGTCCCACACGCAGATTCCGCAAGCCCCTCATCACGTGGGAA 2736
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2737 AAGGACGGCCAGCACAGCATCAGCTCGGCTCATGTCACCGTAGCCCCTTTTGGCTACCTGAAGATCCATCGCCT 2810
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2811 CAAGCCCTCAGATGCGGGCATCTACACCTGTTCTGCGGGGCCCGCCCGGGAGCAGTTTGTGATTAAGCTCATTG 2884
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2885 GAGGCAACCGCAAGCTCGTGGCCAGGCCCCTGAGCCTTTGGAGTGAGGAAGAGGAGGCCCTGCAGGTGAGGAAG 2958
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2959 ACCAATCCAAAAGAAGCCTTGCAAACCCACAAACACCAAAATGGCATCTTCTCCAACGGCAGCAAAGCTGAGAA 3032
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3033 GCGCGGCCTCACTGCAGATCCTGGGAACCGCTATGATGACATTGTGTCTAGGCTGTTGGAGCAGGGCGGCTGGC 3106
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3107 CAGGAGAGCTCCTGGCCTCGTGGGAGGTGCAGGACTCTGCAGAAAGGAACGCATCCTCAGAAGAGGATCCCAAT 3180
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3181 GCTGAACAGGCCCTCCTGCATCTCCCCTTCACCATGGTGGCCGAGCAGAAGCGTCTGGATGACATCCTCAGGAA 3254
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3255 CCTGTCCCAGCAGCCAGAGGAGCTACGGGACCTCTACAGCAAGCACCTGGTGGCCCAGCTGGCCCAGGACATCT 3328
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3329 TCCGAAGCCACCTGGAGAACCAGGATCTGCTTCCTAAGCCCTCTGAGCAGAGGTTTCCTCCCATGGCCGTCCCA 3402
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3403 GCTCACAAACATGTCTCTGGCTTCAGCAGCTCCCTAAGGAGCTCATCTGGAGAGGCTGGAGGTGGCTCCCGTAG 3476
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3477 GCCTCATCGCAAGCCCGCCATCTTGCGGAAGATCTCAGCGGCACAGCAACTCTCAGCCTCGGAGGTAGTCACCC 3550
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3551 ACCTGGGGCAGACTGTGGCTCTAGCCAGTGGGACCCTGAGTGTGCTTCTGCACTGTGAGGCGGTAGGCAACCCA 3624
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3625 AGGCCCACCATCCACTGGACCAGGAACGGAGAAGCAGTTCAATTCAGTGACAGGATTCTTCTACAGCCAGATGA 3698
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3699 TTCCTTACAGATCTTGGCACCAGTGGAAGCTGATGTGGGTTTCTATACTTGCAATGCCACAAATGCCTTGGGAT 3772
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3773 ATGACTCTGTCTCCATTGCTGTCACATTAGCAGGAAAGCCACTAGTGAAGACATCCCGAATGACTGTGCTCAAC 3846
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3847 ACAGAGAAGCCTACAGTCACAGTGGATATCGGTGGCACCGTCAGAACCGTCCGAGGAGTGAATGTGACAATTAA 3920
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3921 CTGCCAAGTGGCAGGTGTACCTGAAGCTGAAGTCACCTGGTTCAGAAATAAAAGCAAATTGGGCTCCTCCCACC 3994
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3995 ACCTGCATGAGGGCTCCTCCCACCACCTGCATGAGGGCTCCTTGCTGCTCACAGATGTGTCCTTCTCTGATCAA 4068
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4069 GGCCTGTATTCCTGCAGGGCAGCCAATCTACACGGAGAACAGACAGAGAGCACGCAGCTCCTGATTCTAGATCC 4142
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4143 CCCGCAAGTCCCCACACAGTTGGAAGACATCAGGGCCTTGCTCTTAGCCACTGGACCGAACCTTCCTTCGGTGC 4216
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4217 TTATGTCCCCTCTGGGAACACAGCTGGTCCTGGATCCTGGGAATTCCGCTCTCCTTGGCTGCCCCATCAAAGGT 4290
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4291 CACCCCACCCCCAATATCACCTGGTTCCAAAATGGCCAGCCAATTGCCACTGCCCCGGGGCTGACCCACCACAT 4364
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4365 CTGGGGAGCTGGACAGATCCTACGAGTTGCAAATCTCAGTGGAGGACCTCAAGGGGAGTTCAGCTGCCTGGCTC 4438
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4439 AGAATGAAGCAGGGACCCTCCTGCAGAAAGCCTCTTTGGTGATCCAAGATTACTGGTGGTCTGTGGATAGACTG 4512
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4513 GCAACCTGCTCCGCATCTTGTGGTAATAGAGGCATTCATCAGCCGCGACTCAGGTGTTTACTGAACACCACGGA 4586
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4587 AGTTGACCCTGAGCACTGTACAGGAAAGCCTCGGCCCGCCGTGCAGCCTGTTGCCTGCAACCGGAGAGACTGTC 4660
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4661 CTTCTCGATGGATGGTGACGTCCTGGTCCGCCTGTACCCGGAGTTGCGGTGGAGGTGTACAAACCCGAAGGGTG 4734
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4735 ACCTGTCAGAAGTTGAAAGCTTCTGGTATTTCTACCCCGGTGTCCAATGACATGTGCAGTCAACTGGCCAAACG 4808
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4809 GCCTGTGGACACCCAGGCCTGCAACCAGCAGCTCTGTGTGGAATGGGCCTTCTCCAGCTGGGGCCAGTGCAATG 4882
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4883 GGCCTTGCATAGGCCCTCGCCTTGCTGTGCAGCACAGGCAGGTCTTCTGCCAGACCCGGGATGGCATCACCTTA 4956
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4957 CCATCAGAGCAGTGCAGTGCCCTCCCCAGGCCCGTGAGCACCCAAAACTGCTGGTCAGAGGCCTGCAGTGTACA 5030
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 5031 CTGGAGAGTCAGCCTCTGGACCCTATGCACGGCAACCTGTGGCAACTATGGCTTCCAGTCCCGGCGGGTGGAGT 5104
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 5105 GTGTTCACGTGCGCACCAACAAGGCTGTGCCCGAGCACCTGTGTTCCTGGGGGCCCCGGCCCGCCAACTGGCAA 5178
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 5179 CGCTGCAACGTCACTCCATGTGAAAACAGTACGTTCCAATCCCAAAGAACATTCTGCAAATTCCCTACAGGCCA 5252
Query 1318 ------------------------------------------------------------- 1317
Sbjct 5253 TCGGGTACAGAGGGCAATCCCTGGGACTGAGCCTGAACACAGGGCACTGGATCAAGTTCCC 5313