Nucleotide Global Alignment
Description
- Query:
- TRCN0000465309
- Subject:
- XM_011518064.3
- Aligned Length:
- 5442
- Identities:
- 1299
- Gaps:
- 4128
Alignment
Query 1 ---------ATGGAATG-CTG---------CCGT----CGGG---------CAACTCC----TGGCACACTG-- 36
||||.|.| ||| |.|| |||| |..|||| |||||| |||
Sbjct 1 ATGGGGACCATGGCACGACTGGAGGCGCCCCAGTGCCCCGGGTTCCTGGCCCGCCTCCTCGGTGGCAC-CTGGT 73
Query 37 --CTCCTCTTTCTGGC------------------------------------TTTCCTGC-------------- 58
||.||||.|.|.|| ||||||||
Sbjct 74 GCCTGCTCTGTATCGCCGGACAGGTATGCGGAGACCAAAGCCAAGGGGCTGTTTTCCTGCGGGAATTTACACTG 147
Query 59 ----------------------------TCCT------------------------------------GAGTTC 68
|||| ||||||
Sbjct 148 ATTCGAAGAGAGAGCCTCCATGAAGATTTCCTGTCTGACCTCTTGAATAGTCACAAAACTGAAGACTCGAGTTC 221
Query 69 CAGGACCGCACGCTCCGAGGAGGACCGGGACGGCCTATGGGATGCCTGGGGCCCATGGAGTGAATGCTCACGCA 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 222 CAGGACCGCACGCTCCGAGGAGGACCGGGACGGCCTATGGGATGCCTGGGGCCCATGGAGTGAATGCTCACGCA 295
Query 143 CCTGCGGGGGAGGGGCCTCCTACTCTCTGAGGCGCTGCCTGAGCAGCAAGAGCTGTGAAGGAAGAAATATCCGA 216
||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 296 CCTGCGGGGGTGGGGCCTCCTACTCTCTGAGGCGCTGCCTGAGCAGCAAGAGCTGTGAAGGAAGAAATATCCGA 369
Query 217 TACAGAACATGCAGTAATGTGGACTGCCCACCAGAAGCAGGTGATTTCCGAGCTCAGCAATGCTCAGCTCATAA 290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 370 TACAGAACATGCAGTAATGTGGACTGCCCACCAGAAGCAGGTGATTTCCGAGCTCAGCAATGCTCAGCTCATAA 443
Query 291 TGATGTCAAGCACCATGGCCAGTTTTATGAATGGCTTCCTGTGTCTAATGACCCTGACAACCCATGTTCACTCA 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 444 TGATGTCAAGCACCATGGCCAGTTTTATGAATGGCTTCCTGTGTCTAATGACCCTGACAACCCATGTTCACTCA 517
Query 365 AGTGCCAAGCCAAAGGAACAACCCTGGTTGTTGAACTAGCACCTAAGGTCTTAGATGGTACGCGTTGCTATACA 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 518 AGTGCCAAGCCAAAGGAACAACCCTGGTTGTTGAACTAGCACCTAAGGTCTTAGATGGTACGCGTTGCTATACA 591
Query 439 GAATCTTTGGATATGTGCATCAGTGGTTTATGCCAAATTGTTGGCTGCGATCACCAGCTGGGAAGCACCGTCAA 512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 592 GAATCTTTGGATATGTGCATCAGTGGTTTATGCCAAATTGTTGGCTGCGATCACCAGCTGGGAAGCACCGTCAA 665
Query 513 GGAAGATAACTGTGGGGTCTGCAACGGAGATGGGTCCACCTGCCGGCTGGTCCGAGGGCAGTATAAATCCCAGC 586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 666 GGAAGATAACTGTGGGGTCTGCAACGGAGATGGGTCCACCTGCCGGCTGGTCCGAGGGCAGTATAAATCCCAGC 739
Query 587 TCTCCGCAACCAAATCGGATGATACTGTGGTTGCAATTCCCTATGGAAGTAGACATATTCGCCTTGTCTTAAAA 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 740 TCTCCGCAACCAAATCGGATGATACTGTGGTTGCAATTCCCTATGGAAGTAGACATATTCGCCTTGTCTTAAAA 813
Query 661 GGTCCTGATCACTTATATCTGGAAACCAAAACCCTCCAGGGGACTAAAGGTGAAAACAGTCTCAGCTCCACAGG 734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 814 GGTCCTGATCACTTATATCTGGAAACCAAAACCCTCCAGGGGACTAAAGGTGAAAACAGTCTCAGCTCCACAGG 887
Query 735 AACTTTCCTTGTGGACAATTCTAGTGTGGACTTCCAGAAATTTCCAGACAAAGAGATACTGAGAATGGCTGGAC 808
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 888 AACTTTCCTTGTGGACAATTCTAGTGTGGACTTCCAGAAATTTCCAGACAAAGAGATACTGAGAATGGCTGGAC 961
Query 809 CACTCACAGCAGATTTCATTGTCAAGATTCGTAACTCGGGCTCCGCTGACAGTACAGTCCAGTTCATCTTCTAT 882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 962 CACTCACAGCAGATTTCATTGTCAAGATTCGTAACTCGGGCTCCGCTGACAGTACAGTCCAGTTCATCTTCTAT 1035
Query 883 CAACCCATCATCCACCGATGGAGGGAGACGGATTTCTTTCCTTGCTCAGCAACCTGTGGAGGAGGTTATCAGCT 956
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1036 CAACCCATCATCCACCGATGGAGGGAGACGGATTTCTTTCCTTGCTCAGCAACCTGTGGAGGAGGTTATCAGCT 1109
Query 957 GACATCGGCTGAGTGCTACGATCTGAGGAGCAACCGTGTGGTTGCTGACCAATACTGTCACTATTACCCAGAGA 1030
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1110 GACATCGGCTGAGTGCTACGATCTGAGGAGCAACCGTGTGGTTGCTGACCAATACTGTCACTATTACCCAGAGA 1183
Query 1031 ACATCAAACCCAAACCCAAGCTTCAGGAGTGCAACTTGGATCCTTGTCCAGCCA-------------------- 1084
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1184 ACATCAAACCCAAACCCAAGCTTCAGGAGTGCAACTTGGATCCTTGTCCAGCCAGTGACGGATACAAGCAGATC 1257
Query 1085 -------------------------------GGTGGGAGGCCACCCCATGGACCGCGTGCTCCTCCTCGTGTGG 1127
|||||||||||||||||||||||||||||||||||||||||||
Sbjct 1258 ATGCCTTATGACCTCTACCATCCCCTTCCTCGGTGGGAGGCCACCCCATGGACCGCGTGCTCCTCCTCGTGTGG 1331
Query 1128 GGGGGGCATCCAGAGCCGGGCAGTTTCCTGTGTGGAGGAGGACATCCAGGGGCATGTCACTTCAGTGGAAGAGT 1201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1332 GGGGGGCATCCAGAGCCGGGCAGTTTCCTGTGTGGAGGAGGACATCCAGGGGCATGTCACTTCAGTGGAAGAGT 1405
Query 1202 GGAAATGCATGTACACCCCTAAGATGCCCATCGCGCAGCCCTGCAACATTTTTGACTGCCCTAAATGGCTGGCA 1275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1406 GGAAATGCATGTACACCCCTAAGATGCCCATCGCGCAGCCCTGCAACATTTTTGACTGCCCTAAATGGCTGGCA 1479
Query 1276 CAGGAGTGGTCTCCG------GTAAC-TGT-------GCCT-----------TCTTTCTTTGTTCAT------- 1317
||||||||||||||| ||.|| ||| |||| |..|.||.|| |||
Sbjct 1480 CAGGAGTGGTCTCCGTGCACAGTGACATGTGGCCAGGGCCTCAGATACCGTGTGGTCCTCTG--CATCGACCAT 1551
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1552 CGAGGAATGCACACAGGAGGCTGTAGCCCAAAAACAAAGCCCCACATAAAAGAGGAATGCATCGTACCCACTCC 1625
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1626 CTGCTATAAACCCAAAGAGAAACTTCCAGTCGAGGCCAAGTTGCCATGGTTCAAACAAGCTCAAGAGCTAGAAG 1699
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1700 AAGGAGCTGCTGTGTCAGAGGAGCCCTCGTTCATCCCAGAGGCCTGGTCGGCCTGCACAGTCACCTGTGGTGTG 1773
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1774 GGGACCCAGGTGCGAATAGTCAGGTGCCAGGTGCTCCTGTCTTTCTCTCAGTCCGTGGCTGACCTGCCTATTGA 1847
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1848 CGAGTGTGAAGGGCCCAAGCCAGCATCCCAGCGTGCCTGTTATGCAGGCCCATGCAGCGGGGAAATTCCTGAGT 1921
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1922 TCAACCCAGACGAGACAGATGGGCTCTTTGGTGGCCTGCAGGATTTCGACGAGCTGTATGACTGGGAGTATGAG 1995
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1996 GGGTTCACCAAGTGCTCCGAGTCCTGTGGAGGAGGTGTCCAGGAGGCTGTGGTGAGCTGCTTGAACAAACAGAC 2069
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2070 TCGGGAGCCTGCTGAGGAGAACCTGTGCGTGACCAGCCGCCGGCCCCCACAGCTCCTGAAGTCCTGCAATTTGG 2143
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2144 ATCCCTGCCCAGCAAGGTGGGAAATTGGCAAGTGGAGTCCATGTAGTCTCACATGTGGGGTCGGCCTACAGACC 2217
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2218 AGAGACGTCTTCTGCAGCCACCTGCTTTCCAGAGAGATGAATGAAACAGTCATCCTGGCTGATGAGCTGTGTCG 2291
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2292 CCAGCCCAAGCCCAGCACGGTGCAAGCTTGTAACCGCTTTAATTGCCCCCCAGCCTGGTACCCTGCACAGTGGC 2365
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2366 AGCCGTGTTCCAGAACGTGTGGCGGGGGTGTTCAGAAACGTGAGGTTCTTTGCAAGCAGCGCATGGCTGATGGC 2439
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2440 AGCTTCCTGGAGCTTCCTGAGACCTTCTGTTCAGCTTCAAAACCTGCCTGCCAGCAAGCATGCAAGAAAGATGA 2513
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2514 CTGTCCCAGCGAGTGGCTTCTCTCAGACTGGACAGAGTGTTCCACAAGCTGCGGGGAAGGCACCCAGACTCGAA 2587
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2588 GCGCCATTTGCCGAAAGATGCTGAAAACCGGCCTCTCAACGGTTGTCAATTCCACCCTGTGCCCGCCCCTGCCT 2661
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2662 TTCTCTTCCTCCATCAGGCCCTGTATGCTGGCAACCTGTGCAAGGCCCGGGCGGCCATCCACGAAGCACAGCCC 2735
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2736 GCACATCGCGGCCGCCAGGAAGGTCTACATACAGACTCGCAGGCAGAGGAAGCTGCACTTCGTGGTGGGGGGCT 2809
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2810 TCGCCTACCTGCTCCCCAAGACGGCGGTGGTGCTGCGCTGCCCGGCGCGCAGGGTCCGCAAGCCCCTCATCACC 2883
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2884 TGGGAGAAGGACGGCCAGCACCTCATCAGCTCGACGCACGTCACGGTGGCCCCCTTCGGCTATCTCAAGATCCA 2957
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2958 CCGCCTCAAGCCCTCGGATGCAGGCGTCTACACCTGCTCAGCGGGCCCGGCCCGGGAGCACTTTGTGATTAAGC 3031
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3032 TCATCGGAGGCAACCGCAAGCTCGTGGCCCGGCCCTTGAGCCCGAGAAGTGAGGAAGAGGTGCTTGCGGGGAGG 3105
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3106 AAGGGCGGCCCGAAGGAGGCCCTGCAGACCCACAAACACCAGAACGGGATCTTCTCCAACGGCAGCAAGGCGGA 3179
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3180 GAAGCGGGGCCTGGCCGCCAACCCGGGGAGCCGCTACGACGACCTCGTCTCCCGGCTGCTGGAGCAGGGCGGCT 3253
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3254 GGCCCGGAGAGCTGCTGGCCTCGTGGGAGGCGCAGGACTCTGCGGAAAGGAACACGACCTCGGAGGAGGACCCG 3327
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3328 GGTGCAGAGCAAGTGCTCCTGCACCTGCCCTTCACCATGGTGACCGAGCAGCGGCGCCTGGACGACATCCTGGG 3401
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3402 GAACCTCTCCCAGCAGCCCGAGGAGCTGCGCGACCTCTACAGCAAGCACCTGGTGGCCCAGCTGGCCCAGGAGA 3475
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3476 TCTTCCGCAGCCACCTGGAGCACCAGGACACGCTCCTGAAGCCCTCGGAGCGCAGGACTTCCCCAGTGACTCTC 3549
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3550 TCGCCTCATAAACACGTGTCTGGCTTCAGCAGCTCCCTGCGGACCTCCTCCACCGGGGACGCCGGGGGAGGCTC 3623
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3624 TCGAAGGCCACACCGCAAGCCCACCATCCTGCGCAAGATCTCAGCGGCCCAGCAGCTCTCAGCCTCGGAGGTGG 3697
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3698 TCACCCACCTGGGGCAGACGGTGGCCCTGGCCAGCGGGACACTGAGTGTTCTTCTGCACTGTGAGGCCATCGGC 3771
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3772 CACCCAAGGCCTACCATCAGCTGGGCCAGGAATGGAGAAGAAGTTCAGTTCAGTGACAGGATTCTTCTACAGCC 3845
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3846 AGATGATTCCTTACAGATCTTGGCACCAGTGGAAGCAGATGTGGGTTTCTACACTTGCAATGCCACCAATGCCT 3919
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3920 TGGGATACGACTCTGTCTCCATTGCCGTCACATTAGCAGGAAAGCCACTAGTGAAAACGTCACGAATGACAGTG 3993
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3994 ATCAACACGGAGAAGCCTGCAGTCACAGTCGATATAGGAAGCACCATCAAAACAGTGCAGGGAGTGAATGTGAC 4067
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4068 AATCAACTGCCAGGTTGCAGGAGTGCCTGAAGCTGAAGTCACTTGGTTCAGGAATAAAAGCAAACTGGGCTCCC 4141
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4142 CGCACCATCTGCACGAAGGCTCCTTGCTGCTCACAAACGTGTCCTCCTCGGATCAGGGCCTGTACTCCTGCAGG 4215
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4216 GCGGCCAATCTTCATGGAGAGCTGACTGAGAGCACCCAGCTGCTGATCCTAGATCCCCCCCAAGTCCCCACACA 4289
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4290 GTTGGAAGACATCAGGGCCTTGCTCGCTGCCACTGGACCGAACCTTCCTTCAGTGCTGACGTCTCCTCTGGGAA 4363
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4364 CACAGCTGGTCCTGGATCCTGGGAATTCTGCTCTCCTTGGCTGCCCCATCAAAGGTCACCCTGTCCCTAATATC 4437
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4438 ACCTGGTTTCATGGTGGTCAGCCAATTGTCACTGCCACAGGACTGACGCATCACATCTTGGCAGCTGGACAGAT 4511
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4512 CCTTCAAGTTGCAAACCTTAGCGGTGGGTCTCAAGGGGAATTCAGCTGCCTTGCTCAGAATGAGGCAGGGGTGC 4585
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4586 TCATGCAGAAGGCATCTTTAGTGATCCAAGATTACTGGTGGTCTGTGGACAGACTGGCAACCTGCTCAGCCTCC 4659
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4660 TGTGGTAACCGGGGGGTTCAGCAGCCCCGCTTGAGGTGCCTGCTGAACAGCACGGAGGTCAACCCTGCCCACTG 4733
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4734 CGCAGGGAAGGTTCGCCCTGCGGTGCAGCCCATCGCGTGCAACCGGAGAGACTGCCCTTCTCGGTGGATGGTGA 4807
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4808 CCTCCTGGTCTGCCTGTACCCGGAGCTGTGGGGGAGGTGTCCAGACCCGCAGGGTGACCTGTCAAAAGCTGAAA 4881
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4882 GCCTCTGGGATCTCCACCCCTGTGTCCAATGACATGTGCACCCAGGTCGCCAAGCGGCCTGTGGACACCCAGGC 4955
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4956 CTGTAACCAGCAGCTGTGTGTGGAGTGGGCCTTCTCCAGCTGGGGCCAGTGCAATGGGCCTTGCATCGGGCCTC 5029
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 5030 ACCTAGCTGTGCAACACAGACAAGTCTTCTGCCAGACACGGGATGGCATCACCTTACCATCAGAGCAGTGCAGT 5103
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 5104 GCTCTTCCGAGGCCTGTGAGCACCCAGAACTGCTGGTCAGAGGCCTGCAGTGTACACTGGAGAGTCAGCCTGTG 5177
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 5178 GACCCTGTGCACAGCTACCTGTGGCAACTACGGCTTCCAGTCCCGGCGTGTGGAGTGTGTGCATGCCCGCACCA 5251
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 5252 ACAAGGCAGTGCCTGAGCACCTGTGCTCCTGGGGGCCCCGGCCTGCCAACTGGCAGCGCTGCAACATCACCCCA 5325
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 5326 TGTGAAAACATGGAGTGCAGAGACACCACCAGGTACTGCGAGAAGGTGAAACAGCTGAAACTCTGCCAACTCAG 5399
Query 1318 ---------------------------------------- 1317
Sbjct 5400 CCAGTTTAAATCTCGCTGCTGTGGAACTTGTGGCAAAGCG 5439