Nucleotide Global Alignment
Description
- Query:
- TRCN0000465309
- Subject:
- XM_017015310.1
- Aligned Length:
- 5453
- Identities:
- 1286
- Gaps:
- 4147
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCAGTATCCATGGATGTCACTGACCTGGCTTCCCGCCATTATGGCCACCAATTATGTGTGTCTTTCACTGAA 74
Query 1 ---------------------------------------------ATGGAATGCTG----CCGTCGGGCAACTC 25
|.|| |||| ||..||||.|..|
Sbjct 75 GCGTCAACCACACCTCTGCCATCAGGTATGCGGAGACCAAAGCCAAGGG---GCTGTTTTCCTGCGGGAATTT- 144
Query 26 CTGGCACACTGCT------------CCTCTTTCTGGCTTTCCTG------CTCCT------------------- 62
||||||.| ||||..|...|.||||||| |||.|
Sbjct 145 -----ACACTGATTCGAAGAGAGAGCCTCCATGAAGATTTCCTGTCTGACCTCTTGAATAGTCACAAAACTGAA 213
Query 63 -----GAGTTCCAGGACCGCACGCTCCGAGGAGGACCGGGACGGCCTATGGGATGCCTGGGGCCCATGGAGTGA 131
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 214 GACTCGAGTTCCAGGACCGCACGCTCCGAGGAGGACCGGGACGGCCTATGGGATGCCTGGGGCCCATGGAGTGA 287
Query 132 ATGCTCACGCACCTGCGGGGGAGGGGCCTCCTACTCTCTGAGGCGCTGCCTGAGCAGCAAGAGCTGTGAAGGAA 205
|||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 288 ATGCTCACGCACCTGCGGGGGTGGGGCCTCCTACTCTCTGAGGCGCTGCCTGAGCAGCAAGAGCTGTGAAGGAA 361
Query 206 GAAATATCCGATACAGAACATGCAGTAATGTGGACTGCCCACCAGAAGCAGGTGATTTCCGAGCTCAGCAATGC 279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 362 GAAATATCCGATACAGAACATGCAGTAATGTGGACTGCCCACCAGAAGCAGGTGATTTCCGAGCTCAGCAATGC 435
Query 280 TCAGCTCATAATGATGTCAAGCACCATGGCCAGTTTTATGAATGGCTTCCTGTGTCTAATGACCCTGACAACCC 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 436 TCAGCTCATAATGATGTCAAGCACCATGGCCAGTTTTATGAATGGCTTCCTGTGTCTAATGACCCTGACAACCC 509
Query 354 ATGTTCACTCAAGTGCCAAGCCAAAGGAACAACCCTGGTTGTTGAACTAGCACCTAAGGTCTTAGATGGTACGC 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 510 ATGTTCACTCAAGTGCCAAGCCAAAGGAACAACCCTGGTTGTTGAACTAGCACCTAAGGTCTTAGATGGTACGC 583
Query 428 GTTGCTATACAGAATCTTTGGATATGTGCATCAGTGGTTTATGCCAAATTGTTGGCTGCGATCACCAGCTGGGA 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 584 GTTGCTATACAGAATCTTTGGATATGTGCATCAGTGGTTTATGCCAAATTGTTGGCTGCGATCACCAGCTGGGA 657
Query 502 AGCACCGTCAAGGAAGATAACTGTGGGGTCTGCAACGGAGATGGGTCCACCTGCCGGCTGGTCCGAGGGCAGTA 575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 658 AGCACCGTCAAGGAAGATAACTGTGGGGTCTGCAACGGAGATGGGTCCACCTGCCGGCTGGTCCGAGGGCAGTA 731
Query 576 TAAATCCCAGCTCTCCGCAACCAAATCGGATGATACTGTGGTTGCAATTCCCTATGGAAGTAGACATATTCGCC 649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 732 TAAATCCCAGCTCTCCGCAACCAAATCGGATGATACTGTGGTTGCAATTCCCTATGGAAGTAGACATATTCGCC 805
Query 650 TTGTCTTAAAAGGTCCTGATCACTTATATCTGGAAACCAAAACCCTCCAGGGGACTAAAGGTGAAAACAGTCTC 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 806 TTGTCTTAAAAGGTCCTGATCACTTATATCTGGAAACCAAAACCCTCCAGGGGACTAAAGGTGAAAACAGTCTC 879
Query 724 AGCTCCACAGGAACTTTCCTTGTGGACAATTCTAGTGTGGACTTCCAGAAATTTCCAGACAAAGAGATACTGAG 797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 880 AGCTCCACAGGAACTTTCCTTGTGGACAATTCTAGTGTGGACTTCCAGAAATTTCCAGACAAAGAGATACTGAG 953
Query 798 AATGGCTGGACCACTCACAGCAGATTTCATTGTCAAGATTCGTAACTCGGGCTCCGCTGACAGTACAGTCCAGT 871
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 954 AATGGCTGGACCACTCACAGCAGATTTCATTGTCAAGATTCGTAACTCGGGCTCCGCTGACAGTACAGTCCAGT 1027
Query 872 TCATCTTCTATCAACCCATCATCCACCGATGGAGGGAGACGGATTTCTTTCCTTGCTCAGCAACCTGTGGAGGA 945
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1028 TCATCTTCTATCAACCCATCATCCACCGATGGAGGGAGACGGATTTCTTTCCTTGCTCAGCAACCTGTGGAGGA 1101
Query 946 GGTTATCAGCTGACATCGGCTGAGTGCTACGATCTGAGGAGCAACCGTGTGGTTGCTGACCAATACTGTCACTA 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1102 GGTTATCAGCTGACATCGGCTGAGTGCTACGATCTGAGGAGCAACCGTGTGGTTGCTGACCAATACTGTCACTA 1175
Query 1020 TTACCCAGAGAACATCAAACCCAAACCCAAGCTTCAGGAGTGCAACTTGGATCCTTGTCCAGCCA--------- 1084
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1176 TTACCCAGAGAACATCAAACCCAAACCCAAGCTTCAGGAGTGCAACTTGGATCCTTGTCCAGCCAGTGACGGAT 1249
Query 1085 ------------------------------------------GGTGGGAGGCCACCCCATGGACCGCGTGCTCC 1116
||||||||||||||||||||||||||||||||
Sbjct 1250 ACAAGCAGATCATGCCTTATGACCTCTACCATCCCCTTCCTCGGTGGGAGGCCACCCCATGGACCGCGTGCTCC 1323
Query 1117 TCCTCGTGTGGGGGGGGCATCCAGAGCCGGGCAGTTTCCTGTGTGGAGGAGGACATCCAGGGGCATGTCACTTC 1190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1324 TCCTCGTGTGGGGGGGGCATCCAGAGCCGGGCAGTTTCCTGTGTGGAGGAGGACATCCAGGGGCATGTCACTTC 1397
Query 1191 AGTGGAAGAGTGGAAATGCATGTACACCCCTAAGATGCCCATCGCGCAGCCCTGCAACATTTTTGACTGCCCTA 1264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1398 AGTGGAAGAGTGGAAATGCATGTACACCCCTAAGATGCCCATCGCGCAGCCCTGCAACATTTTTGACTGCCCTA 1471
Query 1265 AATGGCTGGCACAGGAGTGGTCTCCG------GTAAC-TGT-------GCCT-----------TCTTTCTTTGT 1313
|||||||||||||||||||||||||| ||.|| ||| |||| |..|.||.||
Sbjct 1472 AATGGCTGGCACAGGAGTGGTCTCCGTGCACAGTGACATGTGGCCAGGGCCTCAGATACCGTGTGGTCCTCTG- 1544
Query 1314 TCAT---------------------------------------------------------------------- 1317
|||
Sbjct 1545 -CATCGACCATCGAGGAATGCACACAGGAGGCTGTAGCCCAAAAACAAAGCCCCACATAAAAGAGGAATGCATC 1617
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1618 GTACCCACTCCCTGCTATAAACCCAAAGAGAAACTTCCAGTCGAGGCCAAGTTGCCATGGTTCAAACAAGCTCA 1691
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1692 AGAGCTAGAAGAAGGAGCTGCTGTGTCAGAGGAGCCCTCGTTCATCCCAGAGGCCTGGTCGGCCTGCACAGTCA 1765
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1766 CCTGTGGTGTGGGGACCCAGGTGCGAATAGTCAGGTGCCAGGTGCTCCTGTCTTTCTCTCAGTCCGTGGCTGAC 1839
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1840 CTGCCTATTGACGAGTGTGAAGGGCCCAAGCCAGCATCCCAGCGTGCCTGTTATGCAGGCCCATGCAGCGGGGA 1913
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1914 AATTCCTGAGTTCAACCCAGACGAGACAGATGGGCTCTTTGGTGGCCTGCAGGATTTCGACGAGCTGTATGACT 1987
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1988 GGGAGTATGAGGGGTTCACCAAGTGCTCCGAGTCCTGTGGAGGAGGTGTCCAGGAGGCTGTGGTGAGCTGCTTG 2061
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2062 AACAAACAGACTCGGGAGCCTGCTGAGGAGAACCTGTGCGTGACCAGCCGCCGGCCCCCACAGCTCCTGAAGTC 2135
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2136 CTGCAATTTGGATCCCTGCCCAGCAAGGTGGGAAATTGGCAAGTGGAGTCCATGTAGTCTCACATGTGGGGTCG 2209
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2210 GCCTACAGACCAGAGACGTCTTCTGCAGCCACCTGCTTTCCAGAGAGATGAATGAAACAGTCATCCTGGCTGAT 2283
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2284 GAGCTGTGTCGCCAGCCCAAGCCCAGCACGGTGCAAGCTTGTAACCGCTTTAATTGCCCCCCAGCCTGGTACCC 2357
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2358 TGCACAGTGGCAGCCGTGTTCCAGAACGTGTGGCGGGGGTGTTCAGAAACGTGAGGTTCTTTGCAAGCAGCGCA 2431
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2432 TGGCTGATGGCAGCTTCCTGGAGCTTCCTGAGACCTTCTGTTCAGCTTCAAAACCTGCCTGCCAGCAAGCATGC 2505
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2506 AAGAAAGATGACTGTCCCAGCGAGTGGCTTCTCTCAGACTGGACAGAGTGTTCCACAAGCTGCGGGGAAGGCAC 2579
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2580 CCAGACTCGAAGCGCCATTTGCCGAAAGATGCTGAAAACCGGCCTCTCAACGGTTGTCAATTCCACCCTGTGCC 2653
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2654 CGCCCCTGCCTTTCTCTTCCTCCATCAGGCCCTGTATGCTGGCAACCTGTGCAAGGCCCGGGCGGCCATCCACG 2727
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2728 AAGCACAGCCCGCACATCGCGGCCGCCAGGAAGGTCTACATACAGACTCGCAGGCAGAGGAAGCTGCACTTCGT 2801
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2802 GGTGGGGGGCTTCGCCTACCTGCTCCCCAAGACGGCGGTGGTGCTGCGCTGCCCGGCGCGCAGGGTCCGCAAGC 2875
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2876 CCCTCATCACCTGGGAGAAGGACGGCCAGCACCTCATCAGCTCGACGCACGTCACGGTGGCCCCCTTCGGCTAT 2949
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2950 CTCAAGATCCACCGCCTCAAGCCCTCGGATGCAGGCGTCTACACCTGCTCAGCGGGCCCGGCCCGGGAGCACTT 3023
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3024 TGTGATTAAGCTCATCGGAGGCAACCGCAAGCTCGTGGCCCGGCCCTTGAGCCCGAGAAGTGAGGAAGAGGTGC 3097
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3098 TTGCGGGGAGGAAGGGCGGCCCGAAGGAGGCCCTGCAGACCCACAAACACCAGAACGGGATCTTCTCCAACGGC 3171
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3172 AGCAAGGCGGAGAAGCGGGGCCTGGCCGCCAACCCGGGGAGCCGCTACGACGACCTCGTCTCCCGGCTGCTGGA 3245
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3246 GCAGGGCGGCTGGCCCGGAGAGCTGCTGGCCTCGTGGGAGGCGCAGGACTCTGCGGAAAGGAACACGACCTCGG 3319
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3320 AGGAGGACCCGGGTGCAGAGCAAGTGCTCCTGCACCTGCCCTTCACCATGGTGACCGAGCAGCGGCGCCTGGAC 3393
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3394 GACATCCTGGGGAACCTCTCCCAGCAGCCCGAGGAGCTGCGCGACCTCTACAGCAAGCACCTGGTGGCCCAGCT 3467
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3468 GGCCCAGGAGATCTTCCGCAGCCACCTGGAGCACCAGGACACGCTCCTGAAGCCCTCGGAGCGCAGGACTTCCC 3541
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3542 CAGTGACTCTCTCGCCTCATAAACACGTGTCTGGCTTCAGCAGCTCCCTGCGGACCTCCTCCACCGGGGACGCC 3615
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3616 GGGGGAGGCTCTCGAAGGCCACACCGCAAGCCCACCATCCTGCGCAAGATCTCAGCGGCCCAGCAGCTCTCAGC 3689
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3690 CTCGGAGGTGGTCACCCACCTGGGGCAGACGGTGGCCCTGGCCAGCGGGACACTGAGTGTTCTTCTGCACTGTG 3763
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3764 AGGCCATCGGCCACCCAAGGCCTACCATCAGCTGGGCCAGGAATGGAGAAGAAGTTCAGTTCAGTGACAGGATT 3837
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3838 CTTCTACAGCCAGATGATTCCTTACAGATCTTGGCACCAGTGGAAGCAGATGTGGGTTTCTACACTTGCAATGC 3911
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3912 CACCAATGCCTTGGGATACGACTCTGTCTCCATTGCCGTCACATTAGCAGGAAAGCCACTAGTGAAAACGTCAC 3985
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3986 GAATGACAGTGATCAACACGGAGAAGCCTGCAGTCACAGTCGATATAGGAAGCACCATCAAAACAGTGCAGGGA 4059
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4060 GTGAATGTGACAATCAACTGCCAGGTTGCAGGAGTGCCTGAAGCTGAAGTCACTTGGTTCAGGAATAAAAGCAA 4133
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4134 ACTGGGCTCCCCGCACCATCTGCACGAAGGCTCCTTGCTGCTCACAAACGTGTCCTCCTCGGATCAGGGCCTGT 4207
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4208 ACTCCTGCAGGGCGGCCAATCTTCATGGAGAGCTGACTGAGAGCACCCAGCTGCTGATCCTAGATCCCCCCCAA 4281
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4282 GTCCCCACACAGTTGGAAGACATCAGGGCCTTGCTCGCTGCCACTGGACCGAACCTTCCTTCAGTGCTGACGTC 4355
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4356 TCCTCTGGGAACACAGCTGGTCCTGGATCCTGGGAATTCTGCTCTCCTTGGCTGCCCCATCAAAGGTCACCCTG 4429
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4430 TCCCTAATATCACCTGGTTTCATGGTGGTCAGCCAATTGTCACTGCCACAGGACTGACGCATCACATCTTGGCA 4503
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4504 GCTGGACAGATCCTTCAAGTTGCAAACCTTAGCGGTGGGTCTCAAGGGGAATTCAGCTGCCTTGCTCAGAATGA 4577
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4578 GGCAGGGGTGCTCATGCAGAAGGCATCTTTAGTGATCCAAGATTACTGGTGGTCTGTGGACAGACTGGCAACCT 4651
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4652 GCTCAGCCTCCTGTGGTAACCGGGGGGTTCAGCAGCCCCGCTTGAGGTGCCTGCTGAACAGCACGGAGGTCAAC 4725
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4726 CCTGCCCACTGCGCAGGGAAGGTTCGCCCTGCGGTGCAGCCCATCGCGTGCAACCGGAGAGACTGCCCTTCTCG 4799
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4800 GTGGATGGTGACCTCCTGGTCTGCCTGTACCCGGAGCTGTGGGGGAGGTGTCCAGACCCGCAGGGTGACCTGTC 4873
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4874 AAAAGCTGAAAGCCTCTGGGATCTCCACCCCTGTGTCCAATGACATGTGCACCCAGGTCGCCAAGCGGCCTGTG 4947
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4948 GACACCCAGGCCTGTAACCAGCAGCTGTGTGTGGAGTGGGCCTTCTCCAGCTGGGGCCAGTGCAATGGGCCTTG 5021
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 5022 CATCGGGCCTCACCTAGCTGTGCAACACAGACAAGTCTTCTGCCAGACACGGGATGGCATCACCTTACCATCAG 5095
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 5096 AGCAGTGCAGTGCTCTTCCGAGGCCTGTGAGCACCCAGAACTGCTGGTCAGAGGCCTGCAGTGTACACTGGAGA 5169
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 5170 GTCAGCCTGTGGACCCTGTGCACAGCTACCTGTGGCAACTACGGCTTCCAGTCCCGGCGTGTGGAGTGTGTGCA 5243
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 5244 TGCCCGCACCAACAAGGCAGTGCCTGAGCACCTGTGCTCCTGGGGGCCCCGGCCTGCCAACTGGCAGCGCTGCA 5317
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 5318 ACATCACCCCATGTGAAAACATGGAGTGCAGAGACACCACCAGGTACTGCGAGAAGGTGAAACAGCTGAAACTC 5391
Query 1318 --------------------------------------------------- 1317
Sbjct 5392 TGCCAACTCAGCCAGTTTAAATCTCGCTGCTGTGGAACTTGTGGCAAAGCG 5442