Nucleotide Global Alignment
Description
- Query:
- TRCN0000465309
- Subject:
- XM_017015311.1
- Aligned Length:
- 5436
- Identities:
- 1292
- Gaps:
- 4122
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTGTGCGGACGCCGGACCAGGACTCATTTCTTCAAGTGGTTTCGACTTCCTATTATCTGGATTTGATCCATC 74
Query 1 ----------------------------------------------------------------ATGGAATGC- 9
||||.||||
Sbjct 75 ACTTATGTCAGATCAACTAAGCCTGGTCCATCATGGTTACAAAGTGCCCAGCCTGGCACCATGCATGGTATGCG 148
Query 10 --------TGCCGTCGGGC--AACTCCTGGC--------ACACTGCT------------CCTCTTTCTGGCTTT 53
.|||...|||| ...|||| || ||||||.| ||||..|...|.|||
Sbjct 149 GAGACCAAAGCCAAGGGGCTGTTTTCCT-GCGGGAATTTACACTGATTCGAAGAGAGAGCCTCCATGAAGATTT 221
Query 54 CCTG------CTCCT------------------------GAGTTCCAGGACCGCACGCTCCGAGGAGGACCGGG 97
|||| |||.| |||||||||||||||||||||||||||||||||||
Sbjct 222 CCTGTCTGACCTCTTGAATAGTCACAAAACTGAAGACTCGAGTTCCAGGACCGCACGCTCCGAGGAGGACCGGG 295
Query 98 ACGGCCTATGGGATGCCTGGGGCCCATGGAGTGAATGCTCACGCACCTGCGGGGGAGGGGCCTCCTACTCTCTG 171
|||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||
Sbjct 296 ACGGCCTATGGGATGCCTGGGGCCCATGGAGTGAATGCTCACGCACCTGCGGGGGTGGGGCCTCCTACTCTCTG 369
Query 172 AGGCGCTGCCTGAGCAGCAAGAGCTGTGAAGGAAGAAATATCCGATACAGAACATGCAGTAATGTGGACTGCCC 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 370 AGGCGCTGCCTGAGCAGCAAGAGCTGTGAAGGAAGAAATATCCGATACAGAACATGCAGTAATGTGGACTGCCC 443
Query 246 ACCAGAAGCAGGTGATTTCCGAGCTCAGCAATGCTCAGCTCATAATGATGTCAAGCACCATGGCCAGTTTTATG 319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 444 ACCAGAAGCAGGTGATTTCCGAGCTCAGCAATGCTCAGCTCATAATGATGTCAAGCACCATGGCCAGTTTTATG 517
Query 320 AATGGCTTCCTGTGTCTAATGACCCTGACAACCCATGTTCACTCAAGTGCCAAGCCAAAGGAACAACCCTGGTT 393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 518 AATGGCTTCCTGTGTCTAATGACCCTGACAACCCATGTTCACTCAAGTGCCAAGCCAAAGGAACAACCCTGGTT 591
Query 394 GTTGAACTAGCACCTAAGGTCTTAGATGGTACGCGTTGCTATACAGAATCTTTGGATATGTGCATCAGTGGTTT 467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 592 GTTGAACTAGCACCTAAGGTCTTAGATGGTACGCGTTGCTATACAGAATCTTTGGATATGTGCATCAGTGGTTT 665
Query 468 ATGCCAAATTGTTGGCTGCGATCACCAGCTGGGAAGCACCGTCAAGGAAGATAACTGTGGGGTCTGCAACGGAG 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 666 ATGCCAAATTGTTGGCTGCGATCACCAGCTGGGAAGCACCGTCAAGGAAGATAACTGTGGGGTCTGCAACGGAG 739
Query 542 ATGGGTCCACCTGCCGGCTGGTCCGAGGGCAGTATAAATCCCAGCTCTCCGCAACCAAATCGGATGATACTGTG 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 740 ATGGGTCCACCTGCCGGCTGGTCCGAGGGCAGTATAAATCCCAGCTCTCCGCAACCAAATCGGATGATACTGTG 813
Query 616 GTTGCAATTCCCTATGGAAGTAGACATATTCGCCTTGTCTTAAAAGGTCCTGATCACTTATATCTGGAAACCAA 689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 814 GTTGCAATTCCCTATGGAAGTAGACATATTCGCCTTGTCTTAAAAGGTCCTGATCACTTATATCTGGAAACCAA 887
Query 690 AACCCTCCAGGGGACTAAAGGTGAAAACAGTCTCAGCTCCACAGGAACTTTCCTTGTGGACAATTCTAGTGTGG 763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 888 AACCCTCCAGGGGACTAAAGGTGAAAACAGTCTCAGCTCCACAGGAACTTTCCTTGTGGACAATTCTAGTGTGG 961
Query 764 ACTTCCAGAAATTTCCAGACAAAGAGATACTGAGAATGGCTGGACCACTCACAGCAGATTTCATTGTCAAGATT 837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 962 ACTTCCAGAAATTTCCAGACAAAGAGATACTGAGAATGGCTGGACCACTCACAGCAGATTTCATTGTCAAGATT 1035
Query 838 CGTAACTCGGGCTCCGCTGACAGTACAGTCCAGTTCATCTTCTATCAACCCATCATCCACCGATGGAGGGAGAC 911
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1036 CGTAACTCGGGCTCCGCTGACAGTACAGTCCAGTTCATCTTCTATCAACCCATCATCCACCGATGGAGGGAGAC 1109
Query 912 GGATTTCTTTCCTTGCTCAGCAACCTGTGGAGGAGGTTATCAGCTGACATCGGCTGAGTGCTACGATCTGAGGA 985
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1110 GGATTTCTTTCCTTGCTCAGCAACCTGTGGAGGAGGTTATCAGCTGACATCGGCTGAGTGCTACGATCTGAGGA 1183
Query 986 GCAACCGTGTGGTTGCTGACCAATACTGTCACTATTACCCAGAGAACATCAAACCCAAACCCAAGCTTCAGGAG 1059
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1184 GCAACCGTGTGGTTGCTGACCAATACTGTCACTATTACCCAGAGAACATCAAACCCAAACCCAAGCTTCAGGAG 1257
Query 1060 TGCAACTTGGATCCTTGTCCAGCCAGGTGGGAGGCCACCCCATGGACCGCGTGCTCCTCCTCGTGTGGGGGGGG 1133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1258 TGCAACTTGGATCCTTGTCCAGCCAGGTGGGAGGCCACCCCATGGACCGCGTGCTCCTCCTCGTGTGGGGGGGG 1331
Query 1134 CATCCAGAGCCGGGCAGTTTCCTGTGTGGAGGAGGACATCCAGGGGCATGTCACTTCAGTGGAAGAGTGGAAAT 1207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1332 CATCCAGAGCCGGGCAGTTTCCTGTGTGGAGGAGGACATCCAGGGGCATGTCACTTCAGTGGAAGAGTGGAAAT 1405
Query 1208 GCATGTACACCCCTAAGATGCCCATCGCGCAGCCCTGCAACATTTTTGACTGCCCTAAATGGCTGGCACAGGAG 1281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1406 GCATGTACACCCCTAAGATGCCCATCGCGCAGCCCTGCAACATTTTTGACTGCCCTAAATGGCTGGCACAGGAG 1479
Query 1282 TGGTCTCCG------GTAAC-TGT-------GCCT-----------TCTTTCTTTGTTCAT------------- 1317
||||||||| ||.|| ||| |||| |..|.||.|| |||
Sbjct 1480 TGGTCTCCGTGCACAGTGACATGTGGCCAGGGCCTCAGATACCGTGTGGTCCTCTG--CATCGACCATCGAGGA 1551
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1552 ATGCACACAGGAGGCTGTAGCCCAAAAACAAAGCCCCACATAAAAGAGGAATGCATCGTACCCACTCCCTGCTA 1625
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1626 TAAACCCAAAGAGAAACTTCCAGTCGAGGCCAAGTTGCCATGGTTCAAACAAGCTCAAGAGCTAGAAGAAGGAG 1699
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1700 CTGCTGTGTCAGAGGAGCCCTCGTTCATCCCAGAGGCCTGGTCGGCCTGCACAGTCACCTGTGGTGTGGGGACC 1773
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1774 CAGGTGCGAATAGTCAGGTGCCAGGTGCTCCTGTCTTTCTCTCAGTCCGTGGCTGACCTGCCTATTGACGAGTG 1847
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1848 TGAAGGGCCCAAGCCAGCATCCCAGCGTGCCTGTTATGCAGGCCCATGCAGCGGGGAAATTCCTGAGTTCAACC 1921
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1922 CAGACGAGACAGATGGGCTCTTTGGTGGCCTGCAGGATTTCGACGAGCTGTATGACTGGGAGTATGAGGGGTTC 1995
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1996 ACCAAGTGCTCCGAGTCCTGTGGAGGAGGTGTCCAGGAGGCTGTGGTGAGCTGCTTGAACAAACAGACTCGGGA 2069
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2070 GCCTGCTGAGGAGAACCTGTGCGTGACCAGCCGCCGGCCCCCACAGCTCCTGAAGTCCTGCAATTTGGATCCCT 2143
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2144 GCCCAGCAAGGTGGGAAATTGGCAAGTGGAGTCCATGTAGTCTCACATGTGGGGTCGGCCTACAGACCAGAGAC 2217
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2218 GTCTTCTGCAGCCACCTGCTTTCCAGAGAGATGAATGAAACAGTCATCCTGGCTGATGAGCTGTGTCGCCAGCC 2291
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2292 CAAGCCCAGCACGGTGCAAGCTTGTAACCGCTTTAATTGCCCCCCAGCCTGGTACCCTGCACAGTGGCAGCCGT 2365
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2366 GTTCCAGAACGTGTGGCGGGGGTGTTCAGAAACGTGAGGTTCTTTGCAAGCAGCGCATGGCTGATGGCAGCTTC 2439
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2440 CTGGAGCTTCCTGAGACCTTCTGTTCAGCTTCAAAACCTGCCTGCCAGCAAGCATGCAAGAAAGATGACTGTCC 2513
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2514 CAGCGAGTGGCTTCTCTCAGACTGGACAGAGTGTTCCACAAGCTGCGGGGAAGGCACCCAGACTCGAAGCGCCA 2587
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2588 TTTGCCGAAAGATGCTGAAAACCGGCCTCTCAACGGTTGTCAATTCCACCCTGTGCCCGCCCCTGCCTTTCTCT 2661
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2662 TCCTCCATCAGGCCCTGTATGCTGGCAACCTGTGCAAGGCCCGGGCGGCCATCCACGAAGCACAGCCCGCACAT 2735
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2736 CGCGGCCGCCAGGAAGGTCTACATACAGACTCGCAGGCAGAGGAAGCTGCACTTCGTGGTGGGGGGCTTCGCCT 2809
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2810 ACCTGCTCCCCAAGACGGCGGTGGTGCTGCGCTGCCCGGCGCGCAGGGTCCGCAAGCCCCTCATCACCTGGGAG 2883
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2884 AAGGACGGCCAGCACCTCATCAGCTCGACGCACGTCACGGTGGCCCCCTTCGGCTATCTCAAGATCCACCGCCT 2957
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2958 CAAGCCCTCGGATGCAGGCGTCTACACCTGCTCAGCGGGCCCGGCCCGGGAGCACTTTGTGATTAAGCTCATCG 3031
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3032 GAGGCAACCGCAAGCTCGTGGCCCGGCCCTTGAGCCCGAGAAGTGAGGAAGAGGTGCTTGCGGGGAGGAAGGGC 3105
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3106 GGCCCGAAGGAGGCCCTGCAGACCCACAAACACCAGAACGGGATCTTCTCCAACGGCAGCAAGGCGGAGAAGCG 3179
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3180 GGGCCTGGCCGCCAACCCGGGGAGCCGCTACGACGACCTCGTCTCCCGGCTGCTGGAGCAGGGCGGCTGGCCCG 3253
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3254 GAGAGCTGCTGGCCTCGTGGGAGGCGCAGGACTCTGCGGAAAGGAACACGACCTCGGAGGAGGACCCGGGTGCA 3327
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3328 GAGCAAGTGCTCCTGCACCTGCCCTTCACCATGGTGACCGAGCAGCGGCGCCTGGACGACATCCTGGGGAACCT 3401
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3402 CTCCCAGCAGCCCGAGGAGCTGCGCGACCTCTACAGCAAGCACCTGGTGGCCCAGCTGGCCCAGGAGATCTTCC 3475
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3476 GCAGCCACCTGGAGCACCAGGACACGCTCCTGAAGCCCTCGGAGCGCAGGACTTCCCCAGTGACTCTCTCGCCT 3549
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3550 CATAAACACGTGTCTGGCTTCAGCAGCTCCCTGCGGACCTCCTCCACCGGGGACGCCGGGGGAGGCTCTCGAAG 3623
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3624 GCCACACCGCAAGCCCACCATCCTGCGCAAGATCTCAGCGGCCCAGCAGCTCTCAGCCTCGGAGGTGGTCACCC 3697
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3698 ACCTGGGGCAGACGGTGGCCCTGGCCAGCGGGACACTGAGTGTTCTTCTGCACTGTGAGGCCATCGGCCACCCA 3771
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3772 AGGCCTACCATCAGCTGGGCCAGGAATGGAGAAGAAGTTCAGTTCAGTGACAGGATTCTTCTACAGCCAGATGA 3845
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3846 TTCCTTACAGATCTTGGCACCAGTGGAAGCAGATGTGGGTTTCTACACTTGCAATGCCACCAATGCCTTGGGAT 3919
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3920 ACGACTCTGTCTCCATTGCCGTCACATTAGCAGGAAAGCCACTAGTGAAAACGTCACGAATGACAGTGATCAAC 3993
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3994 ACGGAGAAGCCTGCAGTCACAGTCGATATAGGAAGCACCATCAAAACAGTGCAGGGAGTGAATGTGACAATCAA 4067
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4068 CTGCCAGGTTGCAGGAGTGCCTGAAGCTGAAGTCACTTGGTTCAGGAATAAAAGCAAACTGGGCTCCCCGCACC 4141
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4142 ATCTGCACGAAGGCTCCTTGCTGCTCACAAACGTGTCCTCCTCGGATCAGGGCCTGTACTCCTGCAGGGCGGCC 4215
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4216 AATCTTCATGGAGAGCTGACTGAGAGCACCCAGCTGCTGATCCTAGATCCCCCCCAAGTCCCCACACAGTTGGA 4289
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4290 AGACATCAGGGCCTTGCTCGCTGCCACTGGACCGAACCTTCCTTCAGTGCTGACGTCTCCTCTGGGAACACAGC 4363
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4364 TGGTCCTGGATCCTGGGAATTCTGCTCTCCTTGGCTGCCCCATCAAAGGTCACCCTGTCCCTAATATCACCTGG 4437
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4438 TTTCATGGTGGTCAGCCAATTGTCACTGCCACAGGACTGACGCATCACATCTTGGCAGCTGGACAGATCCTTCA 4511
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4512 AGTTGCAAACCTTAGCGGTGGGTCTCAAGGGGAATTCAGCTGCCTTGCTCAGAATGAGGCAGGGGTGCTCATGC 4585
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4586 AGAAGGCATCTTTAGTGATCCAAGATTACTGGTGGTCTGTGGACAGACTGGCAACCTGCTCAGCCTCCTGTGGT 4659
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4660 AACCGGGGGGTTCAGCAGCCCCGCTTGAGGTGCCTGCTGAACAGCACGGAGGTCAACCCTGCCCACTGCGCAGG 4733
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4734 GAAGGTTCGCCCTGCGGTGCAGCCCATCGCGTGCAACCGGAGAGACTGCCCTTCTCGGTGGATGGTGACCTCCT 4807
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4808 GGTCTGCCTGTACCCGGAGCTGTGGGGGAGGTGTCCAGACCCGCAGGGTGACCTGTCAAAAGCTGAAAGCCTCT 4881
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4882 GGGATCTCCACCCCTGTGTCCAATGACATGTGCACCCAGGTCGCCAAGCGGCCTGTGGACACCCAGGCCTGTAA 4955
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4956 CCAGCAGCTGTGTGTGGAGTGGGCCTTCTCCAGCTGGGGCCAGTGCAATGGGCCTTGCATCGGGCCTCACCTAG 5029
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 5030 CTGTGCAACACAGACAAGTCTTCTGCCAGACACGGGATGGCATCACCTTACCATCAGAGCAGTGCAGTGCTCTT 5103
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 5104 CCGAGGCCTGTGAGCACCCAGAACTGCTGGTCAGAGGCCTGCAGTGTACACTGGAGAGTCAGCCTGTGGACCCT 5177
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 5178 GTGCACAGCTACCTGTGGCAACTACGGCTTCCAGTCCCGGCGTGTGGAGTGTGTGCATGCCCGCACCAACAAGG 5251
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 5252 CAGTGCCTGAGCACCTGTGCTCCTGGGGGCCCCGGCCTGCCAACTGGCAGCGCTGCAACATCACCCCATGTGAA 5325
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 5326 AACATGGAGTGCAGAGACACCACCAGGTACTGCGAGAAGGTGAAACAGCTGAAACTCTGCCAACTCAGCCAGTT 5399
Query 1318 ---------------------------------- 1317
Sbjct 5400 TAAATCTCGCTGCTGTGGAACTTGTGGCAAAGCG 5433