Nucleotide Global Alignment

Description

Query:
TRCN0000465309
Subject:
XM_017015312.2
Aligned Length:
5391
Identities:
1299
Gaps:
4077

Alignment

Query    1  ---------ATGGAATG-CTG---------CCGT----CGGG---------CAACTCC----TGGCACACTG--  36
                     ||||.|.| |||         |.||    ||||         |..||||    |||||| |||  
Sbjct    1  ATGGGGACCATGGCACGACTGGAGGCGCCCCAGTGCCCCGGGTTCCTGGCCCGCCTCCTCGGTGGCAC-CTGGT  73

Query   37  --CTCCTCTTTCTGGC------------------------------------TTTCCTGC--------------  58
              ||.||||.|.|.||                                    ||||||||              
Sbjct   74  GCCTGCTCTGTATCGCCGGACAGGTATGCGGAGACCAAAGCCAAGGGGCTGTTTTCCTGCGGGAATTTACACTG  147

Query   59  ----------------------------TCCT------------------------------------GAGTTC  68
                                        ||||                                    ||||||
Sbjct  148  ATTCGAAGAGAGAGCCTCCATGAAGATTTCCTGTCTGACCTCTTGAATAGTCACAAAACTGAAGACTCGAGTTC  221

Query   69  CAGGACCGCACGCTCCGAGGAGGACCGGGACGGCCTATGGGATGCCTGGGGCCCATGGAGTGAATGCTCACGCA  142
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  222  CAGGACCGCACGCTCCGAGGAGGACCGGGACGGCCTATGGGATGCCTGGGGCCCATGGAGTGAATGCTCACGCA  295

Query  143  CCTGCGGGGGAGGGGCCTCCTACTCTCTGAGGCGCTGCCTGAGCAGCAAGAGCTGTGAAGGAAGAAATATCCGA  216
            ||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  296  CCTGCGGGGGTGGGGCCTCCTACTCTCTGAGGCGCTGCCTGAGCAGCAAGAGCTGTGAAGGAAGAAATATCCGA  369

Query  217  TACAGAACATGCAGTAATGTGGACTGCCCACCAGAAGCAGGTGATTTCCGAGCTCAGCAATGCTCAGCTCATAA  290
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  370  TACAGAACATGCAGTAATGTGGACTGCCCACCAGAAGCAGGTGATTTCCGAGCTCAGCAATGCTCAGCTCATAA  443

Query  291  TGATGTCAAGCACCATGGCCAGTTTTATGAATGGCTTCCTGTGTCTAATGACCCTGACAACCCATGTTCACTCA  364
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  444  TGATGTCAAGCACCATGGCCAGTTTTATGAATGGCTTCCTGTGTCTAATGACCCTGACAACCCATGTTCACTCA  517

Query  365  AGTGCCAAGCCAAAGGAACAACCCTGGTTGTTGAACTAGCACCTAAGGTCTTAGATGGTACGCGTTGCTATACA  438
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  518  AGTGCCAAGCCAAAGGAACAACCCTGGTTGTTGAACTAGCACCTAAGGTCTTAGATGGTACGCGTTGCTATACA  591

Query  439  GAATCTTTGGATATGTGCATCAGTGGTTTATGCCAAATTGTTGGCTGCGATCACCAGCTGGGAAGCACCGTCAA  512
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  592  GAATCTTTGGATATGTGCATCAGTGGTTTATGCCAAATTGTTGGCTGCGATCACCAGCTGGGAAGCACCGTCAA  665

Query  513  GGAAGATAACTGTGGGGTCTGCAACGGAGATGGGTCCACCTGCCGGCTGGTCCGAGGGCAGTATAAATCCCAGC  586
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  666  GGAAGATAACTGTGGGGTCTGCAACGGAGATGGGTCCACCTGCCGGCTGGTCCGAGGGCAGTATAAATCCCAGC  739

Query  587  TCTCCGCAACCAAATCGGATGATACTGTGGTTGCAATTCCCTATGGAAGTAGACATATTCGCCTTGTCTTAAAA  660
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  740  TCTCCGCAACCAAATCGGATGATACTGTGGTTGCAATTCCCTATGGAAGTAGACATATTCGCCTTGTCTTAAAA  813

Query  661  GGTCCTGATCACTTATATCTGGAAACCAAAACCCTCCAGGGGACTAAAGGTGAAAACAGTCTCAGCTCCACAGG  734
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  814  GGTCCTGATCACTTATATCTGGAAACCAAAACCCTCCAGGGGACTAAAGGTGAAAACAGTCTCAGCTCCACAGG  887

Query  735  AACTTTCCTTGTGGACAATTCTAGTGTGGACTTCCAGAAATTTCCAGACAAAGAGATACTGAGAATGGCTGGAC  808
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  888  AACTTTCCTTGTGGACAATTCTAGTGTGGACTTCCAGAAATTTCCAGACAAAGAGATACTGAGAATGGCTGGAC  961

Query  809  CACTCACAGCAGATTTCATTGTCAAGATTCGTAACTCGGGCTCCGCTGACAGTACAGTCCAGTTCATCTTCTAT  882
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  962  CACTCACAGCAGATTTCATTGTCAAGATTCGTAACTCGGGCTCCGCTGACAGTACAGTCCAGTTCATCTTCTAT  1035

Query  883  CAACCCATCATCCACCGATGGAGGGAGACGGATTTCTTTCCTTGCTCAGCAACCTGTGGAGGAGGTTATCAGCT  956
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1036  CAACCCATCATCCACCGATGGAGGGAGACGGATTTCTTTCCTTGCTCAGCAACCTGTGGAGGAGGTTATCAGCT  1109

Query  957  GACATCGGCTGAGTGCTACGATCTGAGGAGCAACCGTGTGGTTGCTGACCAATACTGTCACTATTACCCAGAGA  1030
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1110  GACATCGGCTGAGTGCTACGATCTGAGGAGCAACCGTGTGGTTGCTGACCAATACTGTCACTATTACCCAGAGA  1183

Query 1031  ACATCAAACCCAAACCCAAGCTTCAGGAGTGCAACTTGGATCCTTGTCCAGCCAGGTGGGAGGCCACCCCATGG  1104
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1184  ACATCAAACCCAAACCCAAGCTTCAGGAGTGCAACTTGGATCCTTGTCCAGCCAGGTGGGAGGCCACCCCATGG  1257

Query 1105  ACCGCGTGCTCCTCCTCGTGTGGGGGGGGCATCCAGAGCCGGGCAGTTTCCTGTGTGGAGGAGGACATCCAGGG  1178
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1258  ACCGCGTGCTCCTCCTCGTGTGGGGGGGGCATCCAGAGCCGGGCAGTTTCCTGTGTGGAGGAGGACATCCAGGG  1331

Query 1179  GCATGTCACTTCAGTGGAAGAGTGGAAATGCATGTACACCCCTAAGATGCCCATCGCGCAGCCCTGCAACATTT  1252
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1332  GCATGTCACTTCAGTGGAAGAGTGGAAATGCATGTACACCCCTAAGATGCCCATCGCGCAGCCCTGCAACATTT  1405

Query 1253  TTGACTGCCCTAAATGGCTGGCACAGGAGTGGTCTCCG------GTAAC-TGT-------GCCT----------  1302
            ||||||||||||||||||||||||||||||||||||||      ||.|| |||       ||||          
Sbjct 1406  TTGACTGCCCTAAATGGCTGGCACAGGAGTGGTCTCCGTGCACAGTGACATGTGGCCAGGGCCTCAGATACCGT  1479

Query 1303  -TCTTTCTTTGTTCAT----------------------------------------------------------  1317
             |..|.||.||  |||                                                          
Sbjct 1480  GTGGTCCTCTG--CATCGACCATCGAGGAATGCACACAGGAGGCTGTAGCCCAAAAACAAAGCCCCACATAAAA  1551

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 1552  GAGGAATGCATCGTACCCACTCCCTGCTATAAACCCAAAGAGAAACTTCCAGTCGAGGCCAAGTTGCCATGGTT  1625

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 1626  CAAACAAGCTCAAGAGCTAGAAGAAGGAGCTGCTGTGTCAGAGGAGCCCTCGTTCATCCCAGAGGCCTGGTCGG  1699

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 1700  CCTGCACAGTCACCTGTGGTGTGGGGACCCAGGTGCGAATAGTCAGGTGCCAGGTGCTCCTGTCTTTCTCTCAG  1773

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 1774  TCCGTGGCTGACCTGCCTATTGACGAGTGTGAAGGGCCCAAGCCAGCATCCCAGCGTGCCTGTTATGCAGGCCC  1847

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 1848  ATGCAGCGGGGAAATTCCTGAGTTCAACCCAGACGAGACAGATGGGCTCTTTGGTGGCCTGCAGGATTTCGACG  1921

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 1922  AGCTGTATGACTGGGAGTATGAGGGGTTCACCAAGTGCTCCGAGTCCTGTGGAGGAGGTGTCCAGGAGGCTGTG  1995

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 1996  GTGAGCTGCTTGAACAAACAGACTCGGGAGCCTGCTGAGGAGAACCTGTGCGTGACCAGCCGCCGGCCCCCACA  2069

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2070  GCTCCTGAAGTCCTGCAATTTGGATCCCTGCCCAGCAAGGTGGGAAATTGGCAAGTGGAGTCCATGTAGTCTCA  2143

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2144  CATGTGGGGTCGGCCTACAGACCAGAGACGTCTTCTGCAGCCACCTGCTTTCCAGAGAGATGAATGAAACAGTC  2217

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2218  ATCCTGGCTGATGAGCTGTGTCGCCAGCCCAAGCCCAGCACGGTGCAAGCTTGTAACCGCTTTAATTGCCCCCC  2291

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2292  AGCCTGGTACCCTGCACAGTGGCAGCCGTGTTCCAGAACGTGTGGCGGGGGTGTTCAGAAACGTGAGGTTCTTT  2365

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2366  GCAAGCAGCGCATGGCTGATGGCAGCTTCCTGGAGCTTCCTGAGACCTTCTGTTCAGCTTCAAAACCTGCCTGC  2439

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2440  CAGCAAGCATGCAAGAAAGATGACTGTCCCAGCGAGTGGCTTCTCTCAGACTGGACAGAGTGTTCCACAAGCTG  2513

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2514  CGGGGAAGGCACCCAGACTCGAAGCGCCATTTGCCGAAAGATGCTGAAAACCGGCCTCTCAACGGTTGTCAATT  2587

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2588  CCACCCTGTGCCCGCCCCTGCCTTTCTCTTCCTCCATCAGGCCCTGTATGCTGGCAACCTGTGCAAGGCCCGGG  2661

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2662  CGGCCATCCACGAAGCACAGCCCGCACATCGCGGCCGCCAGGAAGGTCTACATACAGACTCGCAGGCAGAGGAA  2735

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2736  GCTGCACTTCGTGGTGGGGGGCTTCGCCTACCTGCTCCCCAAGACGGCGGTGGTGCTGCGCTGCCCGGCGCGCA  2809

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2810  GGGTCCGCAAGCCCCTCATCACCTGGGAGAAGGACGGCCAGCACCTCATCAGCTCGACGCACGTCACGGTGGCC  2883

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2884  CCCTTCGGCTATCTCAAGATCCACCGCCTCAAGCCCTCGGATGCAGGCGTCTACACCTGCTCAGCGGGCCCGGC  2957

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2958  CCGGGAGCACTTTGTGATTAAGCTCATCGGAGGCAACCGCAAGCTCGTGGCCCGGCCCTTGAGCCCGAGAAGTG  3031

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3032  AGGAAGAGGTGCTTGCGGGGAGGAAGGGCGGCCCGAAGGAGGCCCTGCAGACCCACAAACACCAGAACGGGATC  3105

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3106  TTCTCCAACGGCAGCAAGGCGGAGAAGCGGGGCCTGGCCGCCAACCCGGGGAGCCGCTACGACGACCTCGTCTC  3179

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3180  CCGGCTGCTGGAGCAGGGCGGCTGGCCCGGAGAGCTGCTGGCCTCGTGGGAGGCGCAGGACTCTGCGGAAAGGA  3253

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3254  ACACGACCTCGGAGGAGGACCCGGGTGCAGAGCAAGTGCTCCTGCACCTGCCCTTCACCATGGTGACCGAGCAG  3327

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3328  CGGCGCCTGGACGACATCCTGGGGAACCTCTCCCAGCAGCCCGAGGAGCTGCGCGACCTCTACAGCAAGCACCT  3401

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3402  GGTGGCCCAGCTGGCCCAGGAGATCTTCCGCAGCCACCTGGAGCACCAGGACACGCTCCTGAAGCCCTCGGAGC  3475

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3476  GCAGGACTTCCCCAGTGACTCTCTCGCCTCATAAACACGTGTCTGGCTTCAGCAGCTCCCTGCGGACCTCCTCC  3549

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3550  ACCGGGGACGCCGGGGGAGGCTCTCGAAGGCCACACCGCAAGCCCACCATCCTGCGCAAGATCTCAGCGGCCCA  3623

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3624  GCAGCTCTCAGCCTCGGAGGTGGTCACCCACCTGGGGCAGACGGTGGCCCTGGCCAGCGGGACACTGAGTGTTC  3697

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3698  TTCTGCACTGTGAGGCCATCGGCCACCCAAGGCCTACCATCAGCTGGGCCAGGAATGGAGAAGAAGTTCAGTTC  3771

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3772  AGTGACAGGATTCTTCTACAGCCAGATGATTCCTTACAGATCTTGGCACCAGTGGAAGCAGATGTGGGTTTCTA  3845

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3846  CACTTGCAATGCCACCAATGCCTTGGGATACGACTCTGTCTCCATTGCCGTCACATTAGCAGGAAAGCCACTAG  3919

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3920  TGAAAACGTCACGAATGACAGTGATCAACACGGAGAAGCCTGCAGTCACAGTCGATATAGGAAGCACCATCAAA  3993

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3994  ACAGTGCAGGGAGTGAATGTGACAATCAACTGCCAGGTTGCAGGAGTGCCTGAAGCTGAAGTCACTTGGTTCAG  4067

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 4068  GAATAAAAGCAAACTGGGCTCCCCGCACCATCTGCACGAAGGCTCCTTGCTGCTCACAAACGTGTCCTCCTCGG  4141

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 4142  ATCAGGGCCTGTACTCCTGCAGGGCGGCCAATCTTCATGGAGAGCTGACTGAGAGCACCCAGCTGCTGATCCTA  4215

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 4216  GATCCCCCCCAAGTCCCCACACAGTTGGAAGACATCAGGGCCTTGCTCGCTGCCACTGGACCGAACCTTCCTTC  4289

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 4290  AGTGCTGACGTCTCCTCTGGGAACACAGCTGGTCCTGGATCCTGGGAATTCTGCTCTCCTTGGCTGCCCCATCA  4363

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 4364  AAGGTCACCCTGTCCCTAATATCACCTGGTTTCATGGTGGTCAGCCAATTGTCACTGCCACAGGACTGACGCAT  4437

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 4438  CACATCTTGGCAGCTGGACAGATCCTTCAAGTTGCAAACCTTAGCGGTGGGTCTCAAGGGGAATTCAGCTGCCT  4511

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 4512  TGCTCAGAATGAGGCAGGGGTGCTCATGCAGAAGGCATCTTTAGTGATCCAAGATTACTGGTGGTCTGTGGACA  4585

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 4586  GACTGGCAACCTGCTCAGCCTCCTGTGGTAACCGGGGGGTTCAGCAGCCCCGCTTGAGGTGCCTGCTGAACAGC  4659

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 4660  ACGGAGGTCAACCCTGCCCACTGCGCAGGGAAGGTTCGCCCTGCGGTGCAGCCCATCGCGTGCAACCGGAGAGA  4733

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 4734  CTGCCCTTCTCGGTGGATGGTGACCTCCTGGTCTGCCTGTACCCGGAGCTGTGGGGGAGGTGTCCAGACCCGCA  4807

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 4808  GGGTGACCTGTCAAAAGCTGAAAGCCTCTGGGATCTCCACCCCTGTGTCCAATGACATGTGCACCCAGGTCGCC  4881

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 4882  AAGCGGCCTGTGGACACCCAGGCCTGTAACCAGCAGCTGTGTGTGGAGTGGGCCTTCTCCAGCTGGGGCCAGTG  4955

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 4956  CAATGGGCCTTGCATCGGGCCTCACCTAGCTGTGCAACACAGACAAGTCTTCTGCCAGACACGGGATGGCATCA  5029

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 5030  CCTTACCATCAGAGCAGTGCAGTGCTCTTCCGAGGCCTGTGAGCACCCAGAACTGCTGGTCAGAGGCCTGCAGT  5103

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 5104  GTACACTGGAGAGTCAGCCTGTGGACCCTGTGCACAGCTACCTGTGGCAACTACGGCTTCCAGTCCCGGCGTGT  5177

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 5178  GGAGTGTGTGCATGCCCGCACCAACAAGGCAGTGCCTGAGCACCTGTGCTCCTGGGGGCCCCGGCCTGCCAACT  5251

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 5252  GGCAGCGCTGCAACATCACCCCATGTGAAAACATGGAGTGCAGAGACACCACCAGGTACTGCGAGAAGGTGAAA  5325

Query 1318  ---------------------------------------------------------------  1317
                                                                           
Sbjct 5326  CAGCTGAAACTCTGCCAACTCAGCCAGTTTAAATCTCGCTGCTGTGGAACTTGTGGCAAAGCG  5388

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