Nucleotide Global Alignment
Description
- Query:
- TRCN0000465309
- Subject:
- XM_017015313.1
- Aligned Length:
- 5288
- Identities:
- 860
- Gaps:
- 4423
Alignment
Query 1 ATGGAATGCTGCCGTCGGGCAACTCCTGGCACACTGCTCCTCTTTCTGGCTTTCCTGCTCCTGAGTTCCAGGAC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CGCACGCTCCGAGGAGGACCGGGACGGCCTATGGGATGCCTGGGGCCCATGGAGTGAATGCTCACGCACCTGCG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 GGGGAGGGGCCTCCTACTCTCTGAGGCGCTGCCTGAGCAGCAAGAGCTGTGAAGGAAGAAATATCCGATACAGA 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 ACATGCAGTAATGTGGACTGCCCACCAGAAGCAGGTGATTTCCGAGCTCAGCAATGCTCAGCTCATAATGATGT 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 CAAGCACCATGGCCAGTTTTATGAATGGCTTCCTGTGTCTAATGACCCTGACAACCCATGTTCACTCAAGTGCC 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 AAGCCAAAGGAACAACCCTGGTTGTTGAACTAGCACCTAAGGTCTTAGATGGTACGCGTTGCTATACAGAATCT 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 TTGGATATGTGCATCAGTGGTTTATGCCAAATTGTTGGCTGCGATCACCAGCTGGGAAGCACCGTCAAGGAAGA 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ------ATGTGCATCAGTGGTTTATGCCAAATTGTTGGCTGCGATCACCAGCTGGGAAGCACCGTCAAGGAAGA 68
Query 519 TAACTGTGGGGTCTGCAACGGAGATGGGTCCACCTGCCGGCTGGTCCGAGGGCAGTATAAATCCCAGCTCTCCG 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 69 TAACTGTGGGGTCTGCAACGGAGATGGGTCCACCTGCCGGCTGGTCCGAGGGCAGTATAAATCCCAGCTCTCCG 142
Query 593 CAACCAAATCGGATGATACTGTGGTTGCAATTCCCTATGGAAGTAGACATATTCGCCTTGTCTTAAAAGGTCCT 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 143 CAACCAAATCGGATGATACTGTGGTTGCAATTCCCTATGGAAGTAGACATATTCGCCTTGTCTTAAAAGGTCCT 216
Query 667 GATCACTTATATCTGGAAACCAAAACCCTCCAGGGGACTAAAGGTGAAAACAGTCTCAGCTCCACAGGAACTTT 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 217 GATCACTTATATCTGGAAACCAAAACCCTCCAGGGGACTAAAGGTGAAAACAGTCTCAGCTCCACAGGAACTTT 290
Query 741 CCTTGTGGACAATTCTAGTGTGGACTTCCAGAAATTTCCAGACAAAGAGATACTGAGAATGGCTGGACCACTCA 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 291 CCTTGTGGACAATTCTAGTGTGGACTTCCAGAAATTTCCAGACAAAGAGATACTGAGAATGGCTGGACCACTCA 364
Query 815 CAGCAGATTTCATTGTCAAGATTCGTAACTCGGGCTCCGCTGACAGTACAGTCCAGTTCATCTTCTATCAACCC 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 365 CAGCAGATTTCATTGTCAAGATTCGTAACTCGGGCTCCGCTGACAGTACAGTCCAGTTCATCTTCTATCAACCC 438
Query 889 ATCATCCACCGATGGAGGGAGACGGATTTCTTTCCTTGCTCAGCAACCTGTGGAGGAGGTTATCAGCTGACATC 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 439 ATCATCCACCGATGGAGGGAGACGGATTTCTTTCCTTGCTCAGCAACCTGTGGAGGAGGTTATCAGCTGACATC 512
Query 963 GGCTGAGTGCTACGATCTGAGGAGCAACCGTGTGGTTGCTGACCAATACTGTCACTATTACCCAGAGAACATCA 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 513 GGCTGAGTGCTACGATCTGAGGAGCAACCGTGTGGTTGCTGACCAATACTGTCACTATTACCCAGAGAACATCA 586
Query 1037 AACCCAAACCCAAGCTTCAGGAGTGCAACTTGGATCCTTGTCCAGCCA-------------------------- 1084
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 587 AACCCAAACCCAAGCTTCAGGAGTGCAACTTGGATCCTTGTCCAGCCAGTGACGGATACAAGCAGATCATGCCT 660
Query 1085 -------------------------GGTGGGAGGCCACCCCATGGACCGCGTGCTCCTCCTCGTGTGGGGGGGG 1133
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 TATGACCTCTACCATCCCCTTCCTCGGTGGGAGGCCACCCCATGGACCGCGTGCTCCTCCTCGTGTGGGGGGGG 734
Query 1134 CATCCAGAGCCGGGCAGTTTCCTGTGTGGAGGAGGACATCCAGGGGCATGTCACTTCAGTGGAAGAGTGGAAAT 1207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 735 CATCCAGAGCCGGGCAGTTTCCTGTGTGGAGGAGGACATCCAGGGGCATGTCACTTCAGTGGAAGAGTGGAAAT 808
Query 1208 GCATGTACACCCCTAAGATGCCCATCGCGCAGCCCTGCAACATTTTTGACTGCCCTAAATGGCTGGCACAGGAG 1281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 809 GCATGTACACCCCTAAGATGCCCATCGCGCAGCCCTGCAACATTTTTGACTGCCCTAAATGGCTGGCACAGGAG 882
Query 1282 TGGTCTCCG------GTAAC-TGT-------GCCT-----------TCTTTCTTTGTTCAT------------- 1317
||||||||| ||.|| ||| |||| |..|.||.|| |||
Sbjct 883 TGGTCTCCGTGCACAGTGACATGTGGCCAGGGCCTCAGATACCGTGTGGTCCTCTG--CATCGACCATCGAGGA 954
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 955 ATGCACACAGGAGGCTGTAGCCCAAAAACAAAGCCCCACATAAAAGAGGAATGCATCGTACCCACTCCCTGCTA 1028
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1029 TAAACCCAAAGAGAAACTTCCAGTCGAGGCCAAGTTGCCATGGTTCAAACAAGCTCAAGAGCTAGAAGAAGGAG 1102
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1103 CTGCTGTGTCAGAGGAGCCCTCGTTCATCCCAGAGGCCTGGTCGGCCTGCACAGTCACCTGTGGTGTGGGGACC 1176
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1177 CAGGTGCGAATAGTCAGGTGCCAGGTGCTCCTGTCTTTCTCTCAGTCCGTGGCTGACCTGCCTATTGACGAGTG 1250
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1251 TGAAGGGCCCAAGCCAGCATCCCAGCGTGCCTGTTATGCAGGCCCATGCAGCGGGGAAATTCCTGAGTTCAACC 1324
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1325 CAGACGAGACAGATGGGCTCTTTGGTGGCCTGCAGGATTTCGACGAGCTGTATGACTGGGAGTATGAGGGGTTC 1398
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1399 ACCAAGTGCTCCGAGTCCTGTGGAGGAGGTGTCCAGGAGGCTGTGGTGAGCTGCTTGAACAAACAGACTCGGGA 1472
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1473 GCCTGCTGAGGAGAACCTGTGCGTGACCAGCCGCCGGCCCCCACAGCTCCTGAAGTCCTGCAATTTGGATCCCT 1546
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1547 GCCCAGCAAGGTGGGAAATTGGCAAGTGGAGTCCATGTAGTCTCACATGTGGGGTCGGCCTACAGACCAGAGAC 1620
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1621 GTCTTCTGCAGCCACCTGCTTTCCAGAGAGATGAATGAAACAGTCATCCTGGCTGATGAGCTGTGTCGCCAGCC 1694
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1695 CAAGCCCAGCACGGTGCAAGCTTGTAACCGCTTTAATTGCCCCCCAGCCTGGTACCCTGCACAGTGGCAGCCGT 1768
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1769 GTTCCAGAACGTGTGGCGGGGGTGTTCAGAAACGTGAGGTTCTTTGCAAGCAGCGCATGGCTGATGGCAGCTTC 1842
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1843 CTGGAGCTTCCTGAGACCTTCTGTTCAGCTTCAAAACCTGCCTGCCAGCAAGCATGCAAGAAAGATGACTGTCC 1916
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1917 CAGCGAGTGGCTTCTCTCAGACTGGACAGAGTGTTCCACAAGCTGCGGGGAAGGCACCCAGACTCGAAGCGCCA 1990
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1991 TTTGCCGAAAGATGCTGAAAACCGGCCTCTCAACGGTTGTCAATTCCACCCTGTGCCCGCCCCTGCCTTTCTCT 2064
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2065 TCCTCCATCAGGCCCTGTATGCTGGCAACCTGTGCAAGGCCCGGGCGGCCATCCACGAAGCACAGCCCGCACAT 2138
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2139 CGCGGCCGCCAGGAAGGTCTACATACAGACTCGCAGGCAGAGGAAGCTGCACTTCGTGGTGGGGGGCTTCGCCT 2212
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2213 ACCTGCTCCCCAAGACGGCGGTGGTGCTGCGCTGCCCGGCGCGCAGGGTCCGCAAGCCCCTCATCACCTGGGAG 2286
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2287 AAGGACGGCCAGCACCTCATCAGCTCGACGCACGTCACGGTGGCCCCCTTCGGCTATCTCAAGATCCACCGCCT 2360
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2361 CAAGCCCTCGGATGCAGGCGTCTACACCTGCTCAGCGGGCCCGGCCCGGGAGCACTTTGTGATTAAGCTCATCG 2434
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2435 GAGGCAACCGCAAGCTCGTGGCCCGGCCCTTGAGCCCGAGAAGTGAGGAAGAGGTGCTTGCGGGGAGGAAGGGC 2508
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2509 GGCCCGAAGGAGGCCCTGCAGACCCACAAACACCAGAACGGGATCTTCTCCAACGGCAGCAAGGCGGAGAAGCG 2582
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2583 GGGCCTGGCCGCCAACCCGGGGAGCCGCTACGACGACCTCGTCTCCCGGCTGCTGGAGCAGGGCGGCTGGCCCG 2656
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2657 GAGAGCTGCTGGCCTCGTGGGAGGCGCAGGACTCTGCGGAAAGGAACACGACCTCGGAGGAGGACCCGGGTGCA 2730
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2731 GAGCAAGTGCTCCTGCACCTGCCCTTCACCATGGTGACCGAGCAGCGGCGCCTGGACGACATCCTGGGGAACCT 2804
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2805 CTCCCAGCAGCCCGAGGAGCTGCGCGACCTCTACAGCAAGCACCTGGTGGCCCAGCTGGCCCAGGAGATCTTCC 2878
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2879 GCAGCCACCTGGAGCACCAGGACACGCTCCTGAAGCCCTCGGAGCGCAGGACTTCCCCAGTGACTCTCTCGCCT 2952
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2953 CATAAACACGTGTCTGGCTTCAGCAGCTCCCTGCGGACCTCCTCCACCGGGGACGCCGGGGGAGGCTCTCGAAG 3026
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3027 GCCACACCGCAAGCCCACCATCCTGCGCAAGATCTCAGCGGCCCAGCAGCTCTCAGCCTCGGAGGTGGTCACCC 3100
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3101 ACCTGGGGCAGACGGTGGCCCTGGCCAGCGGGACACTGAGTGTTCTTCTGCACTGTGAGGCCATCGGCCACCCA 3174
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3175 AGGCCTACCATCAGCTGGGCCAGGAATGGAGAAGAAGTTCAGTTCAGTGACAGGATTCTTCTACAGCCAGATGA 3248
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3249 TTCCTTACAGATCTTGGCACCAGTGGAAGCAGATGTGGGTTTCTACACTTGCAATGCCACCAATGCCTTGGGAT 3322
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3323 ACGACTCTGTCTCCATTGCCGTCACATTAGCAGGAAAGCCACTAGTGAAAACGTCACGAATGACAGTGATCAAC 3396
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3397 ACGGAGAAGCCTGCAGTCACAGTCGATATAGGAAGCACCATCAAAACAGTGCAGGGAGTGAATGTGACAATCAA 3470
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3471 CTGCCAGGTTGCAGGAGTGCCTGAAGCTGAAGTCACTTGGTTCAGGAATAAAAGCAAACTGGGCTCCCCGCACC 3544
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3545 ATCTGCACGAAGGCTCCTTGCTGCTCACAAACGTGTCCTCCTCGGATCAGGGCCTGTACTCCTGCAGGGCGGCC 3618
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3619 AATCTTCATGGAGAGCTGACTGAGAGCACCCAGCTGCTGATCCTAGATCCCCCCCAAGTCCCCACACAGTTGGA 3692
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3693 AGACATCAGGGCCTTGCTCGCTGCCACTGGACCGAACCTTCCTTCAGTGCTGACGTCTCCTCTGGGAACACAGC 3766
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3767 TGGTCCTGGATCCTGGGAATTCTGCTCTCCTTGGCTGCCCCATCAAAGGTCACCCTGTCCCTAATATCACCTGG 3840
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3841 TTTCATGGTGGTCAGCCAATTGTCACTGCCACAGGACTGACGCATCACATCTTGGCAGCTGGACAGATCCTTCA 3914
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3915 AGTTGCAAACCTTAGCGGTGGGTCTCAAGGGGAATTCAGCTGCCTTGCTCAGAATGAGGCAGGGGTGCTCATGC 3988
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3989 AGAAGGCATCTTTAGTGATCCAAGATTACTGGTGGTCTGTGGACAGACTGGCAACCTGCTCAGCCTCCTGTGGT 4062
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4063 AACCGGGGGGTTCAGCAGCCCCGCTTGAGGTGCCTGCTGAACAGCACGGAGGTCAACCCTGCCCACTGCGCAGG 4136
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4137 GAAGGTTCGCCCTGCGGTGCAGCCCATCGCGTGCAACCGGAGAGACTGCCCTTCTCGGTGGATGGTGACCTCCT 4210
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4211 GGTCTGCCTGTACCCGGAGCTGTGGGGGAGGTGTCCAGACCCGCAGGGTGACCTGTCAAAAGCTGAAAGCCTCT 4284
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4285 GGGATCTCCACCCCTGTGTCCAATGACATGTGCACCCAGGTCGCCAAGCGGCCTGTGGACACCCAGGCCTGTAA 4358
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4359 CCAGCAGCTGTGTGTGGAGTGGGCCTTCTCCAGCTGGGGCCAGTGCAATGGGCCTTGCATCGGGCCTCACCTAG 4432
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4433 CTGTGCAACACAGACAAGTCTTCTGCCAGACACGGGATGGCATCACCTTACCATCAGAGCAGTGCAGTGCTCTT 4506
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4507 CCGAGGCCTGTGAGCACCCAGAACTGCTGGTCAGAGGCCTGCAGTGTACACTGGAGAGTCAGCCTGTGGACCCT 4580
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4581 GTGCACAGCTACCTGTGGCAACTACGGCTTCCAGTCCCGGCGTGTGGAGTGTGTGCATGCCCGCACCAACAAGG 4654
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4655 CAGTGCCTGAGCACCTGTGCTCCTGGGGGCCCCGGCCTGCCAACTGGCAGCGCTGCAACATCACCCCATGTGAA 4728
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4729 AACATGGAGTGCAGAGACACCACCAGGTACTGCGAGAAGGTGAAACAGCTGAAACTCTGCCAACTCAGCCAGTT 4802
Query 1318 ---------------------------------- 1317
Sbjct 4803 TAAATCTCGCTGCTGTGGAACTTGTGGCAAAGCG 4836