Nucleotide Global Alignment

Description

Query:
TRCN0000465309
Subject:
XM_017015314.1
Aligned Length:
4488
Identities:
1292
Gaps:
3174

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGTGTGCGGACGCCGGACCAGGACTCATTTCTTCAAGTGGTTTCGACTTCCTATTATCTGGATTTGATCCATC  74

Query    1  ----------------------------------------------------------------ATGGAATGC-  9
                                                                            ||||.|||| 
Sbjct   75  ACTTATGTCAGATCAACTAAGCCTGGTCCATCATGGTTACAAAGTGCCCAGCCTGGCACCATGCATGGTATGCG  148

Query   10  --------TGCCGTCGGGC--AACTCCTGGC--------ACACTGCT------------CCTCTTTCTGGCTTT  53
                    .|||...||||  ...|||| ||        ||||||.|            ||||..|...|.|||
Sbjct  149  GAGACCAAAGCCAAGGGGCTGTTTTCCT-GCGGGAATTTACACTGATTCGAAGAGAGAGCCTCCATGAAGATTT  221

Query   54  CCTG------CTCCT------------------------GAGTTCCAGGACCGCACGCTCCGAGGAGGACCGGG  97
            ||||      |||.|                        |||||||||||||||||||||||||||||||||||
Sbjct  222  CCTGTCTGACCTCTTGAATAGTCACAAAACTGAAGACTCGAGTTCCAGGACCGCACGCTCCGAGGAGGACCGGG  295

Query   98  ACGGCCTATGGGATGCCTGGGGCCCATGGAGTGAATGCTCACGCACCTGCGGGGGAGGGGCCTCCTACTCTCTG  171
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||
Sbjct  296  ACGGCCTATGGGATGCCTGGGGCCCATGGAGTGAATGCTCACGCACCTGCGGGGGTGGGGCCTCCTACTCTCTG  369

Query  172  AGGCGCTGCCTGAGCAGCAAGAGCTGTGAAGGAAGAAATATCCGATACAGAACATGCAGTAATGTGGACTGCCC  245
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  370  AGGCGCTGCCTGAGCAGCAAGAGCTGTGAAGGAAGAAATATCCGATACAGAACATGCAGTAATGTGGACTGCCC  443

Query  246  ACCAGAAGCAGGTGATTTCCGAGCTCAGCAATGCTCAGCTCATAATGATGTCAAGCACCATGGCCAGTTTTATG  319
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  444  ACCAGAAGCAGGTGATTTCCGAGCTCAGCAATGCTCAGCTCATAATGATGTCAAGCACCATGGCCAGTTTTATG  517

Query  320  AATGGCTTCCTGTGTCTAATGACCCTGACAACCCATGTTCACTCAAGTGCCAAGCCAAAGGAACAACCCTGGTT  393
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  518  AATGGCTTCCTGTGTCTAATGACCCTGACAACCCATGTTCACTCAAGTGCCAAGCCAAAGGAACAACCCTGGTT  591

Query  394  GTTGAACTAGCACCTAAGGTCTTAGATGGTACGCGTTGCTATACAGAATCTTTGGATATGTGCATCAGTGGTTT  467
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  592  GTTGAACTAGCACCTAAGGTCTTAGATGGTACGCGTTGCTATACAGAATCTTTGGATATGTGCATCAGTGGTTT  665

Query  468  ATGCCAAATTGTTGGCTGCGATCACCAGCTGGGAAGCACCGTCAAGGAAGATAACTGTGGGGTCTGCAACGGAG  541
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  666  ATGCCAAATTGTTGGCTGCGATCACCAGCTGGGAAGCACCGTCAAGGAAGATAACTGTGGGGTCTGCAACGGAG  739

Query  542  ATGGGTCCACCTGCCGGCTGGTCCGAGGGCAGTATAAATCCCAGCTCTCCGCAACCAAATCGGATGATACTGTG  615
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  740  ATGGGTCCACCTGCCGGCTGGTCCGAGGGCAGTATAAATCCCAGCTCTCCGCAACCAAATCGGATGATACTGTG  813

Query  616  GTTGCAATTCCCTATGGAAGTAGACATATTCGCCTTGTCTTAAAAGGTCCTGATCACTTATATCTGGAAACCAA  689
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  814  GTTGCAATTCCCTATGGAAGTAGACATATTCGCCTTGTCTTAAAAGGTCCTGATCACTTATATCTGGAAACCAA  887

Query  690  AACCCTCCAGGGGACTAAAGGTGAAAACAGTCTCAGCTCCACAGGAACTTTCCTTGTGGACAATTCTAGTGTGG  763
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  888  AACCCTCCAGGGGACTAAAGGTGAAAACAGTCTCAGCTCCACAGGAACTTTCCTTGTGGACAATTCTAGTGTGG  961

Query  764  ACTTCCAGAAATTTCCAGACAAAGAGATACTGAGAATGGCTGGACCACTCACAGCAGATTTCATTGTCAAGATT  837
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  962  ACTTCCAGAAATTTCCAGACAAAGAGATACTGAGAATGGCTGGACCACTCACAGCAGATTTCATTGTCAAGATT  1035

Query  838  CGTAACTCGGGCTCCGCTGACAGTACAGTCCAGTTCATCTTCTATCAACCCATCATCCACCGATGGAGGGAGAC  911
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1036  CGTAACTCGGGCTCCGCTGACAGTACAGTCCAGTTCATCTTCTATCAACCCATCATCCACCGATGGAGGGAGAC  1109

Query  912  GGATTTCTTTCCTTGCTCAGCAACCTGTGGAGGAGGTTATCAGCTGACATCGGCTGAGTGCTACGATCTGAGGA  985
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1110  GGATTTCTTTCCTTGCTCAGCAACCTGTGGAGGAGGTTATCAGCTGACATCGGCTGAGTGCTACGATCTGAGGA  1183

Query  986  GCAACCGTGTGGTTGCTGACCAATACTGTCACTATTACCCAGAGAACATCAAACCCAAACCCAAGCTTCAGGAG  1059
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1184  GCAACCGTGTGGTTGCTGACCAATACTGTCACTATTACCCAGAGAACATCAAACCCAAACCCAAGCTTCAGGAG  1257

Query 1060  TGCAACTTGGATCCTTGTCCAGCCA-------------------------------------------------  1084
            |||||||||||||||||||||||||                                                 
Sbjct 1258  TGCAACTTGGATCCTTGTCCAGCCAGTGACGGATACAAGCAGATCATGCCTTATGACCTCTACCATCCCCTTCC  1331

Query 1085  --GGTGGGAGGCCACCCCATGGACCGCGTGCTCCTCCTCGTGTGGGGGGGGCATCCAGAGCCGGGCAGTTTCCT  1156
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1332  TCGGTGGGAGGCCACCCCATGGACCGCGTGCTCCTCCTCGTGTGGGGGGGGCATCCAGAGCCGGGCAGTTTCCT  1405

Query 1157  GTGTGGAGGAGGACATCCAGGGGCATGTCACTTCAGTGGAAGAGTGGAAATGCATGTACACCCCTAAGATGCCC  1230
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1406  GTGTGGAGGAGGACATCCAGGGGCATGTCACTTCAGTGGAAGAGTGGAAATGCATGTACACCCCTAAGATGCCC  1479

Query 1231  ATCGCGCAGCCCTGCAACATTTTTGACTGCCCTAAATGGCTGGCACAGGAGTGGTCTCCG------GTAAC-TG  1297
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      ||.|| ||
Sbjct 1480  ATCGCGCAGCCCTGCAACATTTTTGACTGCCCTAAATGGCTGGCACAGGAGTGGTCTCCGTGCACAGTGACATG  1553

Query 1298  T-------GCCT-----------TCTTTCTTTGTTCAT------------------------------------  1317
            |       ||||           |..|.||.||  |||                                    
Sbjct 1554  TGGCCAGGGCCTCAGATACCGTGTGGTCCTCTG--CATCGACCATCGAGGAATGCACACAGGAGGCTGTAGCCC  1625

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 1626  AAAAACAAAGCCCCACATAAAAGAGGAATGCATCGTACCCACTCCCTGCTATAAACCCAAAGAGAAACTTCCAG  1699

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 1700  TCGAGGCCAAGTTGCCATGGTTCAAACAAGCTCAAGAGCTAGAAGAAGGAGCTGCTGTGTCAGAGGAGCCCTCG  1773

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 1774  TTCATCCCAGAGGCCTGGTCGGCCTGCACAGTCACCTGTGGTGTGGGGACCCAGGTGCGAATAGTCAGGTGCCA  1847

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 1848  GGTGCTCCTGTCTTTCTCTCAGTCCGTGGCTGACCTGCCTATTGACGAGTGTGAAGGGCCCAAGCCAGCATCCC  1921

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 1922  AGCGTGCCTGTTATGCAGGCCCATGCAGCGGGGAAATTCCTGAGTTCAACCCAGACGAGACAGATGGGCTCTTT  1995

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 1996  GGTGGCCTGCAGGATTTCGACGAGCTGTATGACTGGGAGTATGAGGGGTTCACCAAGTGCTCCGAGTCCTGTGG  2069

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2070  AGGAGGTGTCCAGGAGGCTGTGGTGAGCTGCTTGAACAAACAGACTCGGGAGCCTGCTGAGGAGAACCTGTGCG  2143

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2144  TGACCAGCCGCCGGCCCCCACAGCTCCTGAAGTCCTGCAATTTGGATCCCTGCCCAGCAAGGTGGGAAATTGGC  2217

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2218  AAGTGGAGTCCATGTAGTCTCACATGTGGGGTCGGCCTACAGACCAGAGACGTCTTCTGCAGCCACCTGCTTTC  2291

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2292  CAGAGAGATGAATGAAACAGTCATCCTGGCTGATGAGCTGTGTCGCCAGCCCAAGCCCAGCACGGTGCAAGCTT  2365

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2366  GTAACCGCTTTAATTGCCCCCCAGCCTGGTACCCTGCACAGTGGCAGCCGTGTTCCAGAACGTGTGGCGGGGGT  2439

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2440  GTTCAGAAACGTGAGGTTCTTTGCAAGCAGCGCATGGCTGATGGCAGCTTCCTGGAGCTTCCTGAGACCTTCTG  2513

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2514  TTCAGCTTCAAAACCTGCCTGCCAGCAAGCATGCAAGAAAGATGACTGTCCCAGCGAGTGGCTTCTCTCAGACT  2587

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2588  GGACAGAGTGTTCCACAAGCTGCGGGGAAGGCACCCAGACTCGAAGCGCCATTTGCCGAAAGATGCTGAAAACC  2661

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2662  GGCCTCTCAACGGTTGTCAATTCCACCCTGTGCCCGCCCCTGCCTTTCTCTTCCTCCATCAGGCCCTGTATGCT  2735

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2736  GGCAACCTGTGCAAGGCCCGGGCGGCCATCCACGAAGCACAGCCCGCACATCGCGGCCGCCAGGAAGGTCTACA  2809

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2810  TACAGACTCGCAGGCAGAGGAAGCTGCACTTCGTGGTGGGGGGCTTCGCCTACCTGCTCCCCAAGACGGCGGTG  2883

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2884  GTGCTGCGCTGCCCGGCGCGCAGGGTCCGCAAGCCCCTCATCACCTGGGAGAAGGACGGCCAGCACCTCATCAG  2957

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2958  CTCGACGCACGTCACGGTGGCCCCCTTCGGCTATCTCAAGATCCACCGCCTCAAGCCCTCGGATGCAGGCGTCT  3031

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3032  ACACCTGCTCAGCGGGCCCGGCCCGGGAGCACTTTGTGATTAAGCTCATCGGAGGCAACCGCAAGCTCGTGGCC  3105

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3106  CGGCCCTTGAGCCCGAGAAGTGAGGAAGAGGTGCTTGCGGGGAGGAAGGGCGGCCCGAAGGAGGCCCTGCAGAC  3179

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3180  CCACAAACACCAGAACGGGATCTTCTCCAACGGCAGCAAGGCGGAGAAGCGGGGCCTGGCCGCCAACCCGGGGA  3253

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3254  GCCGCTACGACGACCTCGTCTCCCGGCTGCTGGAGCAGGGCGGCTGGCCCGGAGAGCTGCTGGCCTCGTGGGAG  3327

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3328  GCGCAGGACTCTGCGGAAAGGAACACGACCTCGGAGGAGGACCCGGGTGCAGAGCAAGTGCTCCTGCACCTGCC  3401

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3402  CTTCACCATGGTGACCGAGCAGCGGCGCCTGGACGACATCCTGGGGAACCTCTCCCAGCAGCCCGAGGAGCTGC  3475

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3476  GCGACCTCTACAGCAAGCACCTGGTGGCCCAGCTGGCCCAGGAGATCTTCCGCAGCCACCTGGAGCACCAGGAC  3549

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3550  ACGCTCCTGAAGCCCTCGGAGCGCAGGACTTCCCCAGTGACTCTCTCGCCTCATAAACACGTGTCTGGCTTCAG  3623

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3624  CAGCTCCCTGCGGACCTCCTCCACCGGGGACGCCGGGGGAGGCTCTCGAAGGCCACACCGCAAGCCCACCATCC  3697

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3698  TGCGCAAGATCTCAGCGGCCCAGCAGCTCTCAGCCTCGGAGGTGGTCACCCACCTGGGGCAGACGGTGGCCCTG  3771

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3772  GCCAGCGGGACACTGAGTGTTCTTCTGCACTGTGAGGCCATCGGCCACCCAAGGCCTACCATCAGCTGGGCCAG  3845

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3846  GAATGGAGAAGAAGTTCAGTTCAGTGACAGGATTCTTCTACAGCCAGATGATTCCTTACAGATCTTGGCACCAG  3919

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3920  TGGAAGCAGATGTGGGTTTCTACACTTGCAATGCCACCAATGCCTTGGGATACGACTCTGTCTCCATTGCCGTC  3993

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3994  ACATTAGCAGGAAAGCCACTAGTGAAAACGTCACGAATGACAGTGATCAACACGGAGAAGCCTGCAGTCACAGT  4067

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 4068  CGATATAGGAAGCACCATCAAAACAGTGCAGGGAGTGAATGTGACAATCAACTGCCAGGTTGCAGGAGTGCCTG  4141

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 4142  AAGCTGAAGTCACTTGGTTCAGGAATAAAAGCAAACTGGGCTCCCCGCACCATCTGCACGAAGGCTCCTTGCTG  4215

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 4216  CTCACAAACGTGTCCTCCTCGGATCAGGGCCTGTACTCCTGCAGGGCGGCCAATCTTCATGGAGAGCTGACTGA  4289

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 4290  GAGCACCCAGCTGCTGATCCTAGATCCCCCCCAAGTCCCCACACAGTTGGAAGACATCAGGGCCTTGCTCGCTG  4363

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 4364  CCACTGGACCGAACCTTCCTTCAGTGCTGACGTCTCCTCTGGGAACACAGCTGGTCCTGGATCCTGGGAATTCT  4437

Query 1318  ------------------------------------------------  1317
                                                            
Sbjct 4438  GCTCTCCTTGTTCTGGAGGTCAGAAGTCCAAAACAGATCTTACTGGGC  4485

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