Nucleotide Global Alignment

Description

Query:
TRCN0000465817
Subject:
XM_005254680.3
Aligned Length:
1878
Identities:
1685
Gaps:
192

Alignment

Query    1  ATGTCCAGGTCGGGCGCGGCGGCTGAGAAGGCGGACTCCAGACAGCGACCCCAGATGAAGGTAAATGAATATAA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  AGAAAATCAAAACATCGCTTATGTGTCTCTGAGACCAGCACAGACTACAGTTTTAATAAAAACAGCTAAGGTCT  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  ATCTTGCCCCCTTTTCACTCAGTAATTACCAGCTAGACCAGCTTATGTGCCCCAAATCCCTATCAGAAAAGAAT  222
                                                        ||||||||||||||||||||||||||||||
Sbjct    1  --------------------------------------------ATGTGCCCCAAATCCCTATCAGAAAAGAAT  30

Query  223  TCTAACAATGAAGTGGCGTGTAAGAAGACTAAAATAAAGAAAACTTGCAGAAGGATTATACCTCCAAAGATGAA  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   31  TCTAACAATGAAGTGGCGTGTAAGAAGACTAAAATAAAGAAAACTTGCAGAAGGATTATACCTCCAAAGATGAA  104

Query  297  AAACACATCTTCCAAGGCAGAATCCACGCTGCAAAATTCATCCTCAGCTGTTCATACTGAAAGTAACAAGCTAC  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  105  AAACACATCTTCCAAGGCAGAATCCACGCTGCAAAATTCATCCTCAGCTGTTCATACTGAAAGTAACAAGCTAC  178

Query  371  AACCCAAGAGAACGGCAGATGCGATGAATCTCAGTGTTGATGTGGAAAGTAGTCAGGATGGAGACAGTGATGAA  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  179  AACCCAAGAGAACGGCAGATGCGATGAATCTCAGTGTTGATGTGGAAAGTAGTCAGGATGGAGACAGTGATGAA  252

Query  445  GATACCACACCAGCCCTGGATTTTTCGGGATTGTCACCCTACGAAAGGAAGAGACTGAAGAACATATCAGAAAA  518
            ||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  253  GATACCACACCATCCCTGGATTTTTCGGGATTGTCACCCTACGAAAGGAAGAGACTGAAGAACATATCAGAAAA  326

Query  519  CGCAGACTTTTTTGCTTCTCTTCAGTTGTCTGAGTCTGCTGCAAGACTCCGTGAAATGATAGAGAAGAGACAGC  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  327  CGCAGACTTTTTTGCTTCTCTTCAGTTGTCTGAGTCTGCTGCAAGACTCCGTGAAATGATAGAGAAGAGACAGC  400

Query  593  CTCCTAAATCCAAAAGAAAGAAGCCTAAGAGAGAAAATGGGATTGGATGTAGAAGGTCAATGCGATTACTAAAA  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  401  CTCCTAAATCCAAAAGAAAGAAGCCTAAGAGAGAAAATGGGATTGGATGTAGAAGGTCAATGCGATTACTAAAA  474

Query  667  GTTGATCCTTCGGGAGTTTCATTACCAGCAGCTCCAACACCGCCGACATTAGTAGCAGATGAAACTCCTTTGTT  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  475  GTTGATCCTTCGGGAGTTTCATTACCAGCAGCTCCAACACCGCCGACATTAGTAGCAGATGAAACTCCTTTGTT  548

Query  741  ACCTCCTGGGCCTTTAGAAATGACTTCTGAAAATCAAGAAGACAACAATGAACGATTTAAAGGATTTCTGCACA  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  549  ACCTCCTGGGCCTTTAGAAATGACTTCTGAAAATCAAGAAGACAACAATGAACGATTTAAAGGATTTCTGCACA  622

Query  815  CATGGGCAGGAATGAGCAAGCCAAGTAGTAAGAACACTGAGAAGGGATTATCTAGCATTAAAAGCTACAAAGCC  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  623  CATGGGCAGGAATGAGCAAGCCAAGTAGTAAGAACACTGAGAAGGGATTATCTAGCATTAAAAGCTACAAAGCC  696

Query  889  AATTTAAATGGCATGGTCATTAGTGAAGATACCGTTTACAAAGTTACCACAGGCCCAATATTCTCTATGGCTCT  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  697  AATTTAAATGGCATGGTCATTAGTGAAGATACCGTTTACAAAGTTACCACAGGCCCAATATTCTCTATGGCTCT  770

Query  963  CCATCCATCAGAAACTAGAACTTTGGTAGCAGTTGGGGCCAAATTTGGGCAAGTTGGACTTTGTGATTTGACCC  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  771  CCATCCATCAGAAACTAGAACTTTGGTAGCAGTTGGGGCCAAATTTGGGCAAGTTGGACTTTGTGATTTGACCC  844

Query 1037  AGCAACCTAAAGAAGATGGAGTTTATGTTTTTCATCCCCATAGTCAGCCAGTTAGCTGTCTTTACTTCTCACCC  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  845  AGCAACCTAAAGAAGATGGAGTTTATGTTTTTCATCCCCATAGTCAGCCAGTTAGCTGTCTTTACTTCTCACCC  918

Query 1111  GCCAATCCGGCCCACATACTGTCACTGAGCTATGATGGCACGTTACGCTGTGGGGATTTTTCCAGGGCTATTTT  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  919  GCCAATCCGGCCCACATACTGTCACTGAGCTATGATGGCACGTTACGCTGTGGGGATTTTTCCAGGGCTATTTT  992

Query 1185  TGAAGAGGTGTATAGAAATGAAAGAAGTAGCTTTTCCTCCTTCGACTTCTTGGCAGAAGATGCCTCCACTTTAA  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  993  TGAAGAGGTGTATAGAAATGAAAGAAGTAGCTTTTCCTCCTTCGACTTCTTGGCAGAAGATGCCTCCACTTTAA  1066

Query 1259  TAGTAGGACACTGGGATGGAAATATGTCACTGGTGGATAGACGGACACCTGGAACTTCTTATGAGAAACTTACC  1332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1067  TAGTAGGACACTGGGATGGAAATATGTCACTGGTGGATAGACGGACACCTGGAACTTCTTATGAGAAACTTACC  1140

Query 1333  AGTTCTTCTATGGGAAAAATAAGAACTGTTCATGTCCACCCAGTGCATAGACAGTATTTTATCACTGCCGGATT  1406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1141  AGTTCTTCTATGGGAAAAATAAGAACTGTTCATGTCCACCCAGTGCATAGACAGTATTTTATCACTGCCGGATT  1214

Query 1407  GAGGGATACTCATATTTATGATGCAAGGCGATTGAATTCCAGGAGAAGTCAGCCTTTGATTTCTTTGACTGAAC  1480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1215  GAGGGATACTCATATTTATGATGCAAGGCGATTGAATTCCAGGAGAAGTCAGCCTTTGATTTCTTTGACTGAAC  1288

Query 1481  ATACAAAGAGCATTGCTTCCGCCTATTTTTCACCTCTTACTGGTAACAGAGTGGTGACCACATGTGCTGATTGT  1554
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1289  ATACAAAGAGCATTGCTTCCGCCTATTTTTCACCTCTTACTGGTAACAGAGTGGTGACCACATGTGCTGATTGT  1362

Query 1555  AATCTGAGAATTTTTGACAGCAGCTGTATATCTTCTAAGATTCCGCTCCTCACCACCATCAGGCACAACACTTT  1628
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1363  AATCTGAGAATTTTTGACAGCAGCTGTATATCTTCTAAGATTCCGCTCCTCACCACCATCAGGCACAACACTTT  1436

Query 1629  CACTGGGCGATGGCTGACCAGGTTCCAAGCCATGTGGGATCCTAAACAAGAAGACTGTGTCATAGTTGGCAGCA  1702
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1437  CACTGGGCGATGGCTGACCAGGTTCCAAGCCATGTGGGATCCTAAACAAGAAGACTGTGTCATAGTTGGCAGCA  1510

Query 1703  TGGCCCATCCACGACGGGTAGAAATCTTCCATGAGACAGGAAAGAGGGTGCATTCGTTTGGTGGAGAATACCTT  1776
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1511  TGGCCCATCCACGACGGGTAGAAATCTTCCATGAGACAGGAAAGAGGGTGCATTCGTTTGGTGGAGAATACCTT  1584

Query 1777  GTCTCTGTGTGTTCCATCAATGCCATGCACCCAACTCGGTATATTTTGGCTGGAGGTAATTCCAGCGGGAAGAT  1850
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1585  GTCTCTGTGTGTTCCATCAATGCCATGCACCCAACTCGGTATATTTTGGCTGGAGGTAATTCCAGCGGGAAGAT  1658

Query 1851  ACATGTTTTTATGAATGAAAAAAGCTGC  1878
            ||||||||||||||||||||||||||||
Sbjct 1659  ACATGTTTTTATGAATGAAAAAAGCTGC  1686

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