Nucleotide Global Alignment

Description

Query:
TRCN0000465817
Subject:
XR_001751398.2
Aligned Length:
3829
Identities:
1877
Gaps:
1951

Alignment

Query    1  ----------------------------------------ATGTCCAGGTCGGGCGCGGCGGCTGAGAAGGCGG  34
                                                    ||||||||||||||||||||||||||||||||||
Sbjct    1  AATCTTGGCGGGAAGGCGCCGGCCGCTAAGAAGCCGAAAGATGTCCAGGTCGGGCGCGGCGGCTGAGAAGGCGG  74

Query   35  ACTCCAGACAGCGACCCCAGATGAAGGTAAATGAATATAAAGAAAATCAAAACATCGCTTATGTGTCTCTGAGA  108
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  ACTCCAGACAGCGACCCCAGATGAAGGTAAATGAATATAAAGAAAATCAAAACATCGCTTATGTGTCTCTGAGA  148

Query  109  CCAGCACAGACTACAGTTTTAATAAAAACAGCTAAGGTCTATCTTGCCCCCTTTTCACTCAGTAATTACCAGCT  182
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  CCAGCACAGACTACAGTTTTAATAAAAACAGCTAAGGTCTATCTTGCCCCCTTTTCACTCAGTAATTACCAGCT  222

Query  183  AGACCAGCTTATGTGCCCCAAATCCCTATCAGAAAAGAATTCTAACAATGAAGTGGCGTGTAAGAAGACTAAAA  256
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  AGACCAGCTTATGTGCCCCAAATCCCTATCAGAAAAGAATTCTAACAATGAAGTGGCGTGTAAGAAGACTAAAA  296

Query  257  TAAAGAAAACTTGCAGAAGGATTATACCTCCAAAGATGAAAAACACATCTTCCAAGGCAGAATCCACGCTGCAA  330
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  TAAAGAAAACTTGCAGAAGGATTATACCTCCAAAGATGAAAAACACATCTTCCAAGGCAGAATCCACGCTGCAA  370

Query  331  AATTCATCCTCAGCTGTTCATACTGAAAGTAACAAGCTACAACCCAAGAGAACGGCAGATGCGATGAATCTCAG  404
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AATTCATCCTCAGCTGTTCATACTGAAAGTAACAAGCTACAACCCAAGAGAACGGCAGATGCGATGAATCTCAG  444

Query  405  TGTTGATGTGGAAAGTAGTCAGGATGGAGACAGTGATGAAGATACCACACCAGCCCTGGATTTTTCGGGATTGT  478
            ||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||
Sbjct  445  TGTTGATGTGGAAAGTAGTCAGGATGGAGACAGTGATGAAGATACCACACCATCCCTGGATTTTTCGGGATTGT  518

Query  479  CACCCTACGAAAGGAAGAGACTGAAGAACATATCAGAAAACGCAGACTTTTTTGCTTCTCTTCAGTTGTCTGAG  552
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CACCCTACGAAAGGAAGAGACTGAAGAACATATCAGAAAACGCAGACTTTTTTGCTTCTCTTCAGTTGTCTGAG  592

Query  553  TCTGCTGCAAGACTCCGTGAAATGATAGAGAAGAGACAGCCTCCTAAATCCAAAAGAAAGAAGCCTAAGAGAGA  626
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TCTGCTGCAAGACTCCGTGAAATGATAGAGAAGAGACAGCCTCCTAAATCCAAAAGAAAGAAGCCTAAGAGAGA  666

Query  627  AAATGGGATTGGATGTAGAAGGTCAATGCGATTACTAAAAGTTGATCCTTCGGGAGTTTCATTACCAGCAGCTC  700
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  AAATGGGATTGGATGTAGAAGGTCAATGCGATTACTAAAAGTTGATCCTTCGGGAGTTTCATTACCAGCAGCTC  740

Query  701  CAACACCGCCGACATTAGTAGCAGATGAAACTCCTTTGTTACCTCCTGGGCCTTTAGAAATGACTTCTGAAAAT  774
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CAACACCGCCGACATTAGTAGCAGATGAAACTCCTTTGTTACCTCCTGGGCCTTTAGAAATGACTTCTGAAAAT  814

Query  775  CAAGAAGACAACAATGAACGATTTAAAGGATTTCTGCACACATGGGCAGGAATGAGCAAGCCAAGTAGTAAGAA  848
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  CAAGAAGACAACAATGAACGATTTAAAGGATTTCTGCACACATGGGCAGGAATGAGCAAGCCAAGTAGTAAGAA  888

Query  849  CACTGAGAAGGGATTATCTAGCATTAAAAGCTACAAAGCCAATTTAAATGGCATGGTCATTAGTGAAGATACCG  922
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  CACTGAGAAGGGATTATCTAGCATTAAAAGCTACAAAGCCAATTTAAATGGCATGGTCATTAGTGAAGATACCG  962

Query  923  TTTACAAAGTTACCACAGGCCCAATATTCTCTATGGCTCTCCATCCATCAGAAACTAGAACTTTGGTAGCAGTT  996
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  TTTACAAAGTTACCACAGGCCCAATATTCTCTATGGCTCTCCATCCATCAGAAACTAGAACTTTGGTAGCAGTT  1036

Query  997  GGGGCCAAATTTGGGCAAGTTGGACTTTGTGATTTGACCCAGCAACCTAAAGAAGATGGAGTTTATGTTTTTCA  1070
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  GGGGCCAAATTTGGGCAAGTTGGACTTTGTGATTTGACCCAGCAACCTAAAGAAGATGGAGTTTATGTTTTTCA  1110

Query 1071  TCCCCATAGTCAGCCAGTTAGCTGTCTTTACTTCTCACCCGCCAATCCGGCCCACATACTGTCACTGAGCTATG  1144
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  TCCCCATAGTCAGCCAGTTAGCTGTCTTTACTTCTCACCCGCCAATCCGGCCCACATACTGTCACTGAGCTATG  1184

Query 1145  ATGGCACGTTACGCTGTGGGGATTTTTCCAGGGCTATTTTTGAAGAGGTGTATAGAAATGAAAGAAGTAGCTTT  1218
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  ATGGCACGTTACGCTGTGGGGATTTTTCCAGGGCTATTTTTGAAGAGGTGTATAGAAATGAAAGAAGTAGCTTT  1258

Query 1219  TCCTCCTTCGACTTCTTGGCAGAAGATGCCTCCACTTTAATAGTAGGACACTGGGATGGAAATATGTCACTGGT  1292
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  TCCTCCTTCGACTTCTTGGCAGAAGATGCCTCCACTTTAATAGTAGGACACTGGGATGGAAATATGTCACTGGT  1332

Query 1293  GGATAGACGGACACCTGGAACTTCTTATGAGAAACTTACCAGTTCTTCTATGGGAAAAATAAGAACTGTTCATG  1366
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  GGATAGACGGACACCTGGAACTTCTTATGAGAAACTTACCAGTTCTTCTATGGGAAAAATAAGAACTGTTCATG  1406

Query 1367  TCCACCCAGTGCATAGACAGTATTTTATCACTGCCGGATTGAGGGATACTCATATTTATGATGCAAGGCGATTG  1440
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  TCCACCCAGTGCATAGACAGTATTTTATCACTGCCGGATTGAGGGATACTCATATTTATGATGCAAGGCGATTG  1480

Query 1441  AATTCCAGGAGAAGTCAGCCTTTGATTTCTTTGACTGAACATACAAAGAGCATTGCTTCCGCCTATTTTTCACC  1514
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  AATTCCAGGAGAAGTCAGCCTTTGATTTCTTTGACTGAACATACAAAGAGCATTGCTTCCGCCTATTTTTCACC  1554

Query 1515  TCTTACTGGTAACAGAGTGGTGACCACATGTGCTGATTGTAATCTGAGAATTTTTGACAGCAGCTGTATATCTT  1588
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  TCTTACTGGTAACAGAGTGGTGACCACATGTGCTGATTGTAATCTGAGAATTTTTGACAGCAGCTGTATATCTT  1628

Query 1589  CTAAGATTCCGCTCCTCACCACCATCAGGCACAACACTTTCACTGGGCGATGGCTGACCAGGTTCCAAGCCATG  1662
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  CTAAGATTCCGCTCCTCACCACCATCAGGCACAACACTTTCACTGGGCGATGGCTGACCAGGTTCCAAGCCATG  1702

Query 1663  TGGGATCCTAAACAAGAAGACTGTGTCATAGTTGGCAGCATGGCCCATCCACGACGGGTAGAAATCTTCCATGA  1736
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  TGGGATCCTAAACAAGAAGACTGTGTCATAGTTGGCAGCATGGCCCATCCACGACGGGTAGAAATCTTCCATGA  1776

Query 1737  GACAGGAAAGAGGGTGCATTCGTTTGGTGGAGAATACCTTGTCTCTGTGTGTTCCATCAATGCCATGCACCCAA  1810
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  GACAGGAAAGAGGGTGCATTCGTTTGGTGGAGAATACCTTGTCTCTGTGTGTTCCATCAATGCCATGCACCCAA  1850

Query 1811  CTCGGTATATTTTGGCTGGAGGTAATTCCAGCGGGAAGATACATGTTTTTATGAATGAAAAAAGCTGC------  1878
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
Sbjct 1851  CTCGGTATATTTTGGCTGGAGGTAATTCCAGCGGGAAGATACATGTTTTTATGAATGAAAAAAGCTGCTGAGTT  1924

Query 1879  --------------------------------------------------------------------------  1878
                                                                                      
Sbjct 1925  TTTGGTTTAGGAACATCAATTTGTTCAAATTGACCACTGTCTAAGGAGCCTAGTAATCGGCGTGCCTTAGTGTG  1998

Query 1879  --------------------------------------------------------------------------  1878
                                                                                      
Sbjct 1999  TTTATGTGGTAATGTGTTACATTTAGCAATTATAACATTGTTTTATTAATAAGACTATAAGAAGAGTGTACTTT  2072

Query 1879  --------------------------------------------------------------------------  1878
                                                                                      
Sbjct 2073  TAGTAAGGGAGAAGTCTTGGAGGGTTGCTTCTGCAGGACGGGGAGGGAATTTGAGGGGAGGCTGAGGTGCCGTC  2146

Query 1879  --------------------------------------------------------------------------  1878
                                                                                      
Sbjct 2147  AGGACTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTTTTGCTCTTGTTGCCCAGGCTGGAGTGCAATAGCGCGA  2220

Query 1879  --------------------------------------------------------------------------  1878
                                                                                      
Sbjct 2221  TCTTGGCTCACCGCAACCTCCGCCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGACTCCTAAGTAGCTGGGATT  2294

Query 1879  --------------------------------------------------------------------------  1878
                                                                                      
Sbjct 2295  ACAGGCACCTGCCACCACGCCTGGCTATTTTTTTGTATTTTTAGTAGAGATGGGGTTTCATCATGTTGGCCAGG  2368

Query 1879  --------------------------------------------------------------------------  1878
                                                                                      
Sbjct 2369  CTGGTCTCGAGCTCCTGACCTCAGGTGATCTGCCCGCCTCGGCCTCCAAAAGTGCTGGAATTACAGGCGTGAGC  2442

Query 1879  --------------------------------------------------------------------------  1878
                                                                                      
Sbjct 2443  CACCATGCCTGGCCATCAGAACTTGTAATCAAGACAGTATGTTGAGAAATTCTAACATTATAAATTACAAAGCT  2516

Query 1879  --------------------------------------------------------------------------  1878
                                                                                      
Sbjct 2517  TTGACTATTAAAGTTTTTGTGATCTAATGATACAGTTTTGATTCTATAGTAATTTGTGGCTTATTTTATAGTTT  2590

Query 1879  --------------------------------------------------------------------------  1878
                                                                                      
Sbjct 2591  ATAATGAATACTTATTTCTAGACTCATACACTGGAAGGGGACCCGGAAAGGTAATGTAACTCAGTGATTTTAAA  2664

Query 1879  --------------------------------------------------------------------------  1878
                                                                                      
Sbjct 2665  ACTTGATTTTTTTAACTGAGAACTTTTTTTGCCCCCTGCCTGTAGGTTAAGTCTTACGTGAAATGCCAAGATAA  2738

Query 1879  --------------------------------------------------------------------------  1878
                                                                                      
Sbjct 2739  TTGCTGAGCAGCTTTGGTTACCCAGGGCGGGGTCTGGGTCTGTCTGTACTTTGCCTTTACTCTAGATGGCTCCT  2812

Query 1879  --------------------------------------------------------------------------  1878
                                                                                      
Sbjct 2813  GAGACACAGGCAGGACTCCCAAGCACCGGGTTGGGATCTGCCCTGGTCCCGGCATTCCAGTATAAGATTGCCTC  2886

Query 1879  --------------------------------------------------------------------------  1878
                                                                                      
Sbjct 2887  AGACCTGTGTTTTTCAGACTGGGTTTTTGCTCTTCACATGAAATCAAGTTAGATGACAATGACTGGTGTTGAAA  2960

Query 1879  --------------------------------------------------------------------------  1878
                                                                                      
Sbjct 2961  AAAATGAAAAGGAAAGAATTTGTAAAGAACAGAAAATATATTTGATACCATGGGTAATGGATAAAGAAGTTAAA  3034

Query 1879  --------------------------------------------------------------------------  1878
                                                                                      
Sbjct 3035  GCTACTGCTTAGAATGAAGAAGGCCCCAGGCTTACCTGTCCCGATCTTTAAACTGTCCGAAGGAAATTCAATAG  3108

Query 1879  --------------------------------------------------------------------------  1878
                                                                                      
Sbjct 3109  CCTGTTAAGTGAATACCTTCATTCTTACTTGTATTTGGGGGAATATTATGAAATACTCACCACTTTTGGTATTT  3182

Query 1879  --------------------------------------------------------------------------  1878
                                                                                      
Sbjct 3183  TATGAAAATGTTTTCTTTTCAGAAGTTATGGTAATTTCAATGTGTTTGTTGTTGGGAGGGGAGCTGCCAAATCA  3256

Query 1879  --------------------------------------------------------------------------  1878
                                                                                      
Sbjct 3257  GTTACTAATATTACTGTGTGACATCTATCCAACTTTTTTCATTATTCTTCATTGCCAAATACTGAAAGACTTGT  3330

Query 1879  --------------------------------------------------------------------------  1878
                                                                                      
Sbjct 3331  AAATGGCTTTGGCAATATGTTTGAATTCTAAGAGGAAATATTTTCCCATAATTGTATATCAGAGAAATATAGTG  3404

Query 1879  --------------------------------------------------------------------------  1878
                                                                                      
Sbjct 3405  ATATACAATTTCCTTGAAAACCAATTTCTAAATAATTTTCTTCTCTGTAATCTAAGTGTAAAAAGGTTTAGTTT  3478

Query 1879  --------------------------------------------------------------------------  1878
                                                                                      
Sbjct 3479  TTTAATAGGTTTAGGTGTTTATAAGCAATAGTTCTCTATTTTCTAGTTGATATAAGTAGAAGAATTGACAAGTG  3552

Query 1879  --------------------------------------------------------------------------  1878
                                                                                      
Sbjct 3553  AGATGGAAATGTTAATTTATAAAGGGAAAGAAAAGCTAGGTGAGGTTGAGTTATAATTAAACTGTTCAGGAAAC  3626

Query 1879  --------------------------------------------------------------------------  1878
                                                                                      
Sbjct 3627  ATCGTAAAGGCTTTAGGCTCCCTTTTTCATTTCTATACCAATTAATCTCATGGGTTCTAGAGTGGTTAGTTCTA  3700

Query 1879  --------------------------------------------------------------------------  1878
                                                                                      
Sbjct 3701  CGGGAATTGTTTTTGTTTTTGTTTTTAAAGATGCTGAAAACTACTCTCAATCAAATTAGTACCATCATTTAAGC  3774

Query 1879  -------------------------------------------------------  1878
                                                                   
Sbjct 3775  TTTGAATACTTGGCAGTAATTGCCTGGGCTCGTCAATAAATGTTAGCAAATTCTT  3829

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