Nucleotide Global Alignment

Description

Query:
TRCN0000465897
Subject:
NR_003578.1
Aligned Length:
3016
Identities:
390
Gaps:
2564

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGTTTAGCGTAAACCGGGAAGCGGATCGCGTGGAGTGAAAGTCACCGCAGCGGAGATGGACAAACCATGTGGGT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GCCCTCCAGGTGTGTGCGACCATGAAATGGGAGACTAGCAGGACCCACGTTGGCCAACCGTGGACCTGGTCCCT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCAGTAGGAGTCGTGAGCCAGCTGAATTTGAATGCAAAGATGGAGCAAGGGCCGACTGGAGTCACACTGACATC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CACCCCCATAACATGGGGACAGATCAAGAAAACAAAGCAGGAAGCTGAGAAAATGCTGGAGCATCCATGTGCTT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GGCCATGTTAGCAGTAGTGTCCTGTGAGGATTGATTTCCAAAAACTCCTGTTACATGAGGAAGACACCAAGAAG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  AGCAAAGAAAAGGAGCCAGGGTGGCTCTTCCTCAGCTATCTCTTCCAAATGCATGACAAGGAAGTTCTCATCAA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GAAGGCAAGGCAATACAGAAGTGTTCCACACAGGGACATTGCAAAGACAAGCAAGTCATCACACTGGAGATTTT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TCCTTCCAGGAAATTGAGAAAGATTTTCAGGACTTTGAGTTTCAGTGGCAAGAAGATGAAAGAAATGGCCATGA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  AGCACTCATGACAGAGATAAAAAAGTTGACAGGTAATACAGACTGATATGATCAAAGGCATGCTGGAAACAAAC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CTATTAAAGATCAGCTTGGATCAAGCTTTCATTCACATCTGCCTGAACTGCATATATTGCAGAGCAAAGGGAAA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  ATTGATAGTCAAGATGAGAAGTCTGTCAATGATGCTTCCTCAGTTTCAGCATCCCAAAGAATTTCTTGTATTCC  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TAAAACCCATATTTCTAATAAGTATGGGAATAATTTCCTCCAGGAAGCACACATGAGAGAAAAATCTTTCCAAT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GTAATGAGAGTGGCAAAGCCTTTAATTGTAGCTCACTGTTAAAAAAATGTCAGATAATCCATTTAGGAGAGAAA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AAATATAAATGTGATATATGTGGCAAGGTCTTTAATCAGAAGCGATACCTTGCATACCATCATAGATGTCACAC  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  TGGTGAGAAACCTTACAAGTGTAATCAGTGTGGCAAGACCTTCAGTTACAAGTCATCCCTTGTAATTCACAAGG  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CAATTCATACTGGAGAGAAACCTCACAAGTGTAATGAATGTGGCAAGGTTTTTAATCAAAAAGCATATCTTGCA  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  AGTCATCATAGACTTCATACTGGAGAGAAACCTTACAAATGTGAAGAATGTGACAAAGTTTTTAGTCGCTAATC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  ACACCTTGAAAGACATAGGAGAATTCATACTGGAGAGAAACCGTACAAATGTAAGGTTTGTGACAAGGCTTTCA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GACGTGATTCACACCTGGCACAACATATTGTAATTCACACTGGAGAGAAACCTTACAAGTGTAATGAGTGTGGC  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  AAGACCTTTGTTCAAAATTCATCTCTTGTAATGCATAAGGTCATTCATACTGGAGAGAAATGTTACAAGTGTAA  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  TGAATGTGGCAAGGTTTTTAATCACAAATCAAACCTTGCATGTCATCATAGACTTCATACTGGAGAGAAACCTT  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  ACAAGTGTAATGAATGTGGCAAGGTTTTTAATTGAAAATCAAACCTTGAACATCATCATAGAGTTCATATCGGA  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  GAAAAACCTTACAAATGTGAAGAATGTGACAAAGTTTTCAATTTCAATTCACGCCTTGAAATACATAGGAGAGT  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  TCATACTGGAGAGAAACCATAGAAATGTAAGGTTTGTGACAAGGCATTCGGGTGTGATTCACACCTGGCACAAC  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  ATACTAGAATTCACACTGGAGAGAAACCGTGCAAGTGTGATGAGTGTGACAGAGCCTTCAGTGGTCAGTCAACA  1850

Query    1  -------------------------------------------------------------------------A  1
                                                                                     |
Sbjct 1851  CTTATTCACCATCAAGCAATCCATGTCATAGGGAAACTTTACTAATGTAATGATTGTCACAAAGTCCTCAGTAA  1924

Query    2  TGCTACAACGATTACAAATCATTGGAGAATCCATAATGAAGAGAGATCTTACAAGTGTAATAAATGTGGCAAAT  75
            |||||||||.|||.|||||.||||||||||.||||||||||.||||.|||||||||||.|||||||||||||||
Sbjct 1925  TGCTACAACCATTGCAAATTATTGGAGAATGCATAATGAAGTGAGAACTTACAAGTGTTATAAATGTGGCAAAT  1998

Query   76  TTTTCAGAGATCGTTCACATATTGCAGGTCATCGGTGAACTCATACTGGAGAGAAACCTTACAAATGTCATGAC  149
            ||||||||..|||||||.|..||||||.|.|||.|.||||||||||||||||||||||||||||||||.||||.
Sbjct 1999  TTTTCAGACTTCGTTCATACCTTGCAGTTTATCAGCGAACTCATACTGGAGAGAAACCTTACAAATGTGATGAT  2072

Query  150  TGTGCCAAGGTCTTCAGTCAAGCTTCATCCTATGCAAAACATAGGAGAATTTATACAGGAGAGAAACCTCACAA  223
            ||||.||||||||||||||||||||||||.|||||||||||.|||.|||||.|||||.||.|||||||||||||
Sbjct 2073  TGTGGCAAGGTCTTCAGTCAAGCTTCATCTTATGCAAAACACAGGTGAATTCATACAAGAAAGAAACCTCACAA  2146

Query  224  GTGTGATGATTGTGGCAAAGCCTTTGCTTCACGTTCACACGTCATTAGACATCAGAGAATCTATACTGGACAGA  297
            |.||||||||||||.||||||||||..||||.|||||..|.||||||.|||||||||||||.|||||.||||||
Sbjct 2147  GGGTGATGATTGTGTCAAAGCCTTTATTTCAGGTTCATGCCTCATTACACATCAGAGAATCCATACTAGACAGA  2220

Query  298  AATCTTACAAATGTCATCAGTGTGGCAAGGTCTTCAGTCCAAGATCACTCCATGCAGAACATCAGAAAATTCAT  371
            .||||||||||.|||||..||||||||||.||||.||||..||.|||||||.|||||.|||||||.||||||||
Sbjct 2221  GATCTTACAAAAGTCATATGTGTGGCAAGATCTTTAGTCTGAGGTCACTCCTTGCAGGACATCAGGAAATTCAT  2294

Query  372  TTTTGAGATAACCGTTCCCAATGAAATGAGTATAGCAAACCATCAAGCATTAATTGACATTGGAGTCAATTCAG  445
            |||||||.|||...||.|.||||.||||||||||||||||||||||||| .||||||..||.||.||||.||||
Sbjct 2295  TTTTGAGGTAATAATTTCAAATGCAATGAGTATAGCAAACCATCAAGCA-CAATTGATGTTAGATTCAAATCAG  2367

Query  446  CATTGACT------------------------------------------------------------------  453
            ||||||.|                                                                  
Sbjct 2368  CATTGAGTTCAGTTTGAGTTGACTTAACATTGAGTTCAAGTATTTGTTGAGATTAAAGTGTTTATGTTAAGAGG  2441

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 2442  ATTAGGCCAGGTGCGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCAAGACAGGTAGATCACTTGAGA  2515

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 2516  TCAGGAGTTTGAGAGCAGCCTGGCCAACAGAGGTGAGCACCTTTCCCAGTCTGTTTTTTGTTTCTTCAACAAAA  2589

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 2590  ACTGATAGAGATTTTTATGGGTATTGTGTTGAATCAAAATCACATTGGGTTATGTAATCATTTAACAGTATTAA  2663

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 2664  TTTTTCCAAAACATCAATATGGGTTATATCTTTATATATGTTTTTAATCATTTTGATCAATGTTTGTAGATTTC  2737

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 2738  AATGTATGAATTTCTCACTTCTTTCCATTTATTCCTATTTCTTACTTTAAGTTCTCTAGCAAATGGAAGTGTTT  2811

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 2812  TTAAATTTTCATTTAAAATTGTTTATTGTTAATGTATGAAAATTCAACGAATTTTTGGTGCTGATATTGTATTG  2885

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 2886  TGCAAATCTACTGATGTGTTTATTAGTCACAGTAGTATTTTGGTTGACTCTTTGTGATTTTCTACACAGAAGAT  2959

Query  454  --------------------------------------------------------  453
                                                                    
Sbjct 2960  CATGTCATCTACAAAAAATATAATTTTACTTTTTCTGAAAAAAAAAAAAAAAAAAA  3015

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