Nucleotide Global Alignment

Description

Query:
TRCN0000465897
Subject:
NR_163139.1
Aligned Length:
4927
Identities:
401
Gaps:
4478

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGACCAGGAAGCGGATCCCGTGGAATGACGGTGACGCCGCGGCGGGCGGATTGACTTCTAAAGAATCTTGGTAC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GTGAGGAAGAAACCCAGAAGAGGAAGAGGAAAGCAAAGGAGTCAGGGATGGCTCTTCCTCAGGGACTCATCCAA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GGCCAAGGAAGTCCTCACTGACTCTTTGAGAACTCTATATATGCAAACCCTTTGGGATGGCCACTAAATTTGTC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  ACAGAGTATGGTAACGTGGTTGACTGAACCACAGCCATGAAAGTGAGCTTCCAGCTCTTCTGCTGTTGCACCGC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AGTCCACATTGCCAGCATTGATGGAACGGGCATCAGCCTCCATCTTCTCCTCAATGGACGTGATCACTGGGCCA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GCATTGCCTGGAGGGTCTATTGACATTCAGGGACGTGGCCATAGAATTCTCTCAGGAGGAGTGGAAATGCCTGG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  ACCCTGCTCAGAGGACTCTTTACAGGGATGTGATGCTGGAGAATTATAGGAACCTGGTCTCCCTGGATTTTCGG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TCTGTCACCCAGGCTAAAGTGCAGTGGTGTCACCTCGGCTCACTGCAACCTCCACTTCCCAGGTTCAAGCAATT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CTCCTGCCTCAGCCTTCCAAGTAGCTGGGACTACAGATATCTCTTCCAAATGCATGATGAAGACATTCTTCTCA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  ACAGGGCAAGGCAATACAGAAGCGTTCCACACAGGGACATTGCAAAGACAAGCAAGTCATCACATTGGAGATTT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TTGCTTCCAGAAAATTGAGAAAGACATTCATGGCTTCCAGTTTCAGTGGAAAGAAGATGAAACAAATGACCATG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CAGCACCCATGACAGAAATCAAAGAGTTGACTGGTAGTACAGGCCAACATGATCAAAGGCATGCTGGAAACAAG  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  CATATTAAAGATCAGCTTGGATTAAGCTTTCATTCGCATCTGCCTGAACTGCACATATTTCAGCCTGAAGGGAA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AATTGGTAATCAAGTTGAGAAGTCTATCAACAATGCTTCCTCAGTTTCAACATCCCAAAGAATTTGTTGTAGGC  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CCAAAACCCATATTTCTAATAAGTATGGAAATAATTCCCTCCATTCTTCATTACTCACACAAAAACGGAATGTA  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CACATGAGAGAAAAATCTTTCCAATGTATTGAGAGTGGCAAATCCTTTAATTGTAGCTCACTTTTAAAAAAACA  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TCAGATAACCCACTTAGAAGAGAAACAATGTAAATGTGATGTATATGGCAAGGTATTTAATCAGAAGCGATACC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  TTGCATGCCATCGTAGATCTCACATTGATGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGATCTTTGGTCAC  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  AATACATCCCTCTTCCTTCACAAGGCGCTTCATACTGCAGACAAACCTTATGAATGTGAAGAATGTGACAAAGT  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TTTCAGTCGCAAATCACACCTTGAAACACATAAGATAATTTATACTGGAGGGAAACCATACAAATGTAAGGTTT  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GTGACAAAGCTTTCACATGTAATTCATACCTAGCAAAACATACTATAATTCACACTGGAGAGAAACCTTACAAG  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  TGTAATGAATGTGGCAAGGTTTTTAATCGACTGTCAACCCTTGCACGCCATCGTAGGCTTCATACTGGAGAGAA  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  ACCTTATGAATGTGAAGAATGTGAAAAAGTTTTCAGTCGCAAATCACATCTTGAAAGACATAAGAGGATTCATA  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  CTGGAGAGAAACCATACAAATGTAAGGTTTGTGACAAGGCTTTTGCATATAATTCATACCTGGCAAAACATAGT  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  ATAATTCACACTGGAGAGAAGCCTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCAACAATCAACTCTTGC  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  ACGCCATCATAGACTTCATACTGCAGAGAAACCATACAAATGTGAAGAATGTGACAAAGTTTTCAGGTGCAAAT  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  CACACCTTGAAAGACATAGGAGGATTCATACTGGAGAGAAACCATACAAATGTAAGGTTTGTGACAAGGCTTTC  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  CGGAGTGATTCATGCCTTACAGAACATCAGAGAGTTCATACTGGAGAGAAACCATACATGTGTAATGAATGTGG  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  CAAGGTTTTTAGTACAAAAGCAAACCTTGCATGTCATCATAAACTTCATACTGCAGAGAAACCGTACAAATGTG  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  AAGAATGTGAGAAAGTTTTCAGTCGCAAATCACACATGGAAAGACATAGGAGGATTCATACTGGAGAGAAACCG  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  TACAAATGTAAGGTTTGTGACAAGGCTTTCCGGAGGGATTCACACCTGGCACAACATCAGAGAGTTCATACTGG  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  AGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTCCGTCAGACATCATCGCTTATAATCCATCGTAGGC  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  TTCATACTGGAGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTCAGTCAGATGTCATCCCTCGTATAC  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  CATCATAGGCTTCATAGTGGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCAACAAGCACA  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  CCTTGCACAGCATCAGAGAGTTCATACTGGAGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTCAGTC  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  AGATGTCAAACCTTGTATACCATCATAGACTTCATAGTGGAGAGAAACCTTGAAAGTGTAATGAGTGTGGCAAG  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  ACCTTCAGTCAGATGTCAAACCTTGTATACCATCATAGACTTCATAGTGGAGAGAAACCTTAAAAGTGTAATGA  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  GTGTGGCAACACCTTCCATCACAATTCAACCCTTGTAAGTCACAAAGCCATTCATACTGGAGAGAAACTTTACA  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  AGTGTAATGAATGTGGCAAGGTTTTTAATCAAAAAACAACCCTTGCACGTCATCATAGAATTCATACTGCAGAG  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  AAACTTTACAAATAGGAAGAATGTGACAAAGTTTTCGGTTGCAAATCAAACCTTGAAACACATAAGAAAATGCA  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  TGCTGAAGAGAAACCACACAGATGTAAGGTTTATGACAAGATTTTTGAATATAATTCATACCTGGCAAAACATA  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  TTAGAATTCAAACTGGAGAGAAACCTTACAAATGTGATGAGTGTGGCAACACCTTTGGTCAAAATTCATACCTT  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  GTAATTCAAAAGGCAATTCGTATTGGAGAGAAACCCTACAAGTGTAATGAATGTGGCATAGTTTTTAATCAACA  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  GTCACACCTTGCAAGTCATCATAGTCTTCATACTGCAGAGAAATCTTACAAATGTGAAGACTGTGACAAAGTTG  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  TCAGTCACAAATCACAGCTTGAAAGACAGGAGAATTCATACTGGAGAAAAAACATACAAATGTAAGGTTTGTAA  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  CAAGGCTTTTGGGAGTGATTCACACCTGGCACACCATACTAGAATTCACACTGGAGAGAAACCTTACAAGTGCA  3404

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3405  ATGAGTGTGGCAAAGCCTTTAGTGGGCAGTCACCACTTATTCACCATCAAGCAATCCATAGTATAGGGAAACTT  3478

Query    1  ----------------------------------ATGCTACAACGATTACAAATCATTGGAGAATCCATAATGA  40
                                              ||||||||||.|||.|||||||||||||||||||||||  
Sbjct 3479  GACTAATATAATGATTGTCACAAAGTTTTCAGTAATGCTACAACCATTGCAAATCATTGGAGAATCCATAAT--  3550

Query   41  AGAGAGATCTTACAAGTGTAATAAATGTGGCAAATTTTTCAGAGATCGTTCACATATTGCAGGTCATCGGTGAA  114
             ||||||||||||||||||||||||||||.||.||||||||||.||||||||.|||||||...|||||...|||
Sbjct 3551  -GAGAGATCTTACAAGTGTAATAAATGTGACAGATTTTTCAGATATCGTTCATATATTGCTATTCATCATCGAA  3623

Query  115  CTCATACTGGAGAGAAACCTTACAAATGTCATGACTGTGCCAAGGTCTTCAGTCAAGCTTCATCCTATGCAAAA  188
            |||||.||||||||||||||||.|||||||||||.||||.|||||||||||||||||.||||||||||||||||
Sbjct 3624  CTCATGCTGGAGAGAAACCTTATAAATGTCATGATTGTGGCAAGGTCTTCAGTCAAGTTTCATCCTATGCAAAA  3697

Query  189  CATAGGAGAATTTATACAGGAGAGAAACCTCACAAGTGTGATGATTGTGGCAAAGCCTTTGCTTCACGTTCACA  262
            ||||||||.|||.|||||||||||||| ||||||||||||||||||||||||||||.|||.||||||.||||||
Sbjct 3698  CATAGGAGGATTCATACAGGAGAGAAA-CTCACAAGTGTGATGATTGTGGCAAAGCGTTTACTTCACATTCACA  3770

Query  263  CGTCATTAGACATCAGAGAATCTATACTGGACAGAAATCTTACAAATGTCATCAGTGTGGCAAGGTCTTCAGTC  336
            |.|||.||||||||||||||||.||.||||||||||||||||||||||||||||||||||.|||||||||||||
Sbjct 3771  CCTCAATAGACATCAGAGAATCCATGCTGGACAGAAATCTTACAAATGTCATCAGTGTGGTAAGGTCTTCAGTC  3844

Query  337  CAAGATCACTCCATGCAGAACATCAGAAAATTCATTTTTGAGATAACCGTTCCCAATGAAATGAGTATAGCAAA  410
            |.||||||||||.||||||.|||||||.|||||.||||.||||.|...|||.|.||||..||.||||||||||.
Sbjct 3845  CGAGATCACTCCTTGCAGACCATCAGACAATTCCTTTTGGAGACAGTTGTTTCAAATGCCATTAGTATAGCAAG  3918

Query  411  CCATCAAGCATTAATTGACATTGGAGTCAATTCAGCA----------------TTGACT---------------  453
            ||||||||||||||||||||||..|||.||.|.||||                ||||||               
Sbjct 3919  CCATCAAGCATTAATTGACATTACAGTTAAATGAGCACTGACCTGAGTTTGAGTTGACTTAACATTGAGTTTAA  3992

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 3993  GCATTAATTGACATTAAACTGTTTATGTTAAGAGGACTGGGCTGGGCACTGTGGCTCACGCCTGCAATGCCAGC  4066

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 4067  ACTTTGAGAGGCCAAGACTGGTAGGTCACTGGAGGTTAAGAGTTTGAGAACAGCCTGGCCAACAGACGGGAGCC  4140

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 4141  ACTTTTCCCAGCCTGTGTTTTCATTTCTATTCTTTCTTTCTTTTTTCTTTTTTTTGTTTTTGTTTTTGAGATGG  4214

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 4215  AGTCTCTTGCTCTGTCATCCAGGTTGGAGTGCAGTGGCATGATCTTGACTCACTACAACCTCCGCCTCCCAGGT  4288

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 4289  TCAAGCGATCCTCCTGCCTCAGTCTCCTGACTAGCTGGGACTACAGGTGCATGCCACCACACCTGGATAATTTT  4362

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 4363  TTGTATTTTTAGTAGAGACTGGGTTTCGCTGTGTTAGCCTGGATGGTCTCGATTTTCTGATCTTATGATTCACC  4436

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 4437  CACCTCTACCTCCCGAAGTGCTGAGATTATGGGCGTGAGCCACCGTGACTGGCCTGTTTTTTGTTTCTTTAACA  4510

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 4511  AAAAGTTATGGGGATTTCTATGAGTATTGTGTTGAATCTAAATCACATTCGGTTATATAATCATTGAGCAATAC  4584

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 4585  TAATTTTTCCAATCAGTATGGATTGTATGTGTATTTATATGTTTTTAATCATTTTGATCAATGTTTGTAGATTT  4658

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 4659  CAAGGTACAAACTTCTCACCTTTATATGTTTATTCCTAAATATTTCTTACTTTAAGCTCTTTAGCAAATGGAAG  4732

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 4733  TGGTTTTTAATTTTATTTTAAAATTATTTAATGTTAATGTATGGAAATTCAACTAATTTTTGGTGCTATTATTC  4806

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 4807  TATTCTGCAAATACACTGAATATGTTTATTAGTTCCAGTTGTATTTTGGTTGACTGTGATTTTCTTCACAGATC  4880

Query  454  -------------------------------------------  453
                                                       
Sbjct 4881  ATGTCATCTACAAACAAATAAAATTTGACTTCTTTCTTTCTGA  4923

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