Nucleotide Global Alignment

Description

Query:
TRCN0000465897
Subject:
XR_001753715.2
Aligned Length:
3570
Identities:
387
Gaps:
3124

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCAGACCAGGAAGCGGATCCCGTGGAGTGAAGGTCGCACCGCGGCGGATTGACTTCTAAAGACTTGGTACGTGA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGAAAAAACACGGAAGAGGAAGAGGAAAGCAAAGGAGTCAGGGATGGCTCTTCTTCAGGGTCTACTGACATTCA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GGGATGTGGCCATAGAATTCTCTCAGGAGGAGTGGAAATGCCTGGACCCTGCTCAGAGGACTCTATACAGAGAC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GTGATGCTGGAGAATTATAGGAACCTGGTCTCCCTGGATACCTCTTCCAAATGCATGATGAAGATGTTCTCATC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AACAGGACAAGGCAATACAGAAGTGGTCCACACAGGGACATTGCAAATACATGCAAGTCATCACATTGGAGATA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CTTGCTTCCAGGAAATTGAGAAAGATATTCATGACTTTGTGTTTCAGTGGCAAGAAAATGAAACAAATGGCCAT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GAAGCACTCATGACAAAAACCAAAAAGTTGATGAGTAGTACAGAGCGACATGATCAAAGGCATGCTGGAAACAA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  ACCTATTAAAAATGAGCTTGGATCAAGCTTTCATTCGCATCTGCCTGAAGTGCACATATTTCACCCCGAAGGGA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  AAATTGGTAATCAAGTTGAGAAGGCTATCAACGATGCTTTCTCAGTTTCAGCATCCCAACGAATTTCCTGTAGG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CCAAAAACTCGTATTTCTAATAAGTATAGGAATAATTTCCTCCAGTCTTCATTACTCACACAAAAACGGGAAGT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  ACACACAAGAGAAAAATCTTTCCAACGTAATGAGAGTGGCAAAGCCTTTAATGGTAGCTCACTCTTAAAAAAAC  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  ATCAGATAATCCATTTAGGAGACAAACAGTATAAATGTGATGTATGCGGCAAGGACTTTCATCAGAAGCGATAC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  CTTGCATGCCATAGATGTCACACTGGTGAGAATCCTTACACGTGTAATGAGTGTGGCAAGACATTCAGTCACAA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  TTCAGCCCTGTTAGTTCACAAGGCAATTCATACTGGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGTTT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  TTAATCAACAATCAAACCTTGCACGTCATCATAGAGTTCATACTGGAGAGAAACCTTACAAATGTGAAGAATGT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GACAAAGTTTTCAGTCGCAAATCACACCTTGAAAGACATAGGAGAATTCACACTGGAGAGAAACCATACAAATG  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TAAGGTTTGTGACAAGGCTTTCAGACGTGATTCACACCTGGCACAACATACTGTAATTCACACTGGAGAGAAAC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  CTTACAAGTGTAATGAGTGTGGCAAGACCTTTGTTCAAAATTCATCTCTTGTAATGCATAAGGTCATTCATACT  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GGAGAGAAACGTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCACAAATCAAACCTTGCATGTCATCGTAG  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  ACTTCATACTGGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCGAAAATCAAACCTTGAAC  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GTCATCATAGACTTCATACTGGAAAGAAATCTTAGAAGTGTAAATTTGCAAGGTTTTTAGGCAACAGTCAAACC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  TTGCATGTCATCATAGACTTTATACTGGAGAGAAACCTTACAAATGTGAAGAATGTGACAAAAGTTTTCAATTT  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  CAAATCACTCCTTGAAATACATAGGAGAGTTCATACTGGAGAGAAACCATACAAATGTAAGGTTTGTGACAAGG  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  ATTTCGGGTGTGATTCACACCTGGCCCAACATACTGGAATTCACACTGGAAAGGAACTGTACAAGTGTAATGAG  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  TGTGGCAGAGCCTTTGGTGGTCAGTCAACACTTACTCACCATCAAGCAATCCATGGTATAGGGAAACTTGACTA  1850

Query    1  -----------------------------ATGCTACAACGATTACAAATCATTGGAGAATCCATAATGAAGAGA  45
                                         ||..||||.|.|||.||||.|||||||||||||||||||||| ||
Sbjct 1851  ATGTAATGATTGTCACAAAGTCTTCAGTAATATTACAGCCATTGCAAAACATTGGAGAATCCATAATGAAG-GA  1923

Query   46  GATCTTACAAGTGTAATAAATGTGGCAAATTTTTCAGAGATCGTTCACATATTGCAGGTCATCGGTGAACTCAT  119
            |.||||||||||||||||||||||||||.|||||||||.|||.||||.|..||||||.||||.||.||.||.||
Sbjct 1924  GGTCTTACAAGTGTAATAAATGTGGCAAGTTTTTCAGACATCATTCATAACTTGCAGTTCATTGGCGATCTTAT  1997

Query  120  ACTGGAGAGAAACCTTACAAATGTCATGACTGTGCCAAGGTCTTCAGTCAAGCTTCATCCTATGCAAAACATAG  193
            ||.|||||||||.|||||||||||.||||.||||.||||||||||||||||||||||||.|.||||||||  .|
Sbjct 1998  ACAGGAGAGAAATCTTACAAATGTGATGATTGTGGCAAGGTCTTCAGTCAAGCTTCATCTTTTGCAAAAC--GG  2069

Query  194  GAGAATTTATACAGGAGAGAAACCTCACAAGTGTGATGATTGTG-GCAAAGCCTTTGCTTCACGTTCACACGTC  266
            |||||||.|||||||||||||||||||||||||||||||||||| |||||||||||.||||||||||||||..|
Sbjct 2070  GAGAATTCATACAGGAGAGAAACCTCACAAGTGTGATGATTGTGAGCAAAGCCTTTACTTCACGTTCACACCAC  2143

Query  267  ATTAGACATCAGAGAATCTATACTGGACAGAAATCTTACAAATGTCATCAGTGTGGCAAGGTCTTCAGTCCAAG  340
            ||||||.|||||||.|||.|||||||||||||||||||||||.|||.|..|||||||||||||||||||||.||
Sbjct 2144  ATTAGATATCAGAGGATCCATACTGGACAGAAATCTTACAAACGTCCTATGTGTGGCAAGGTCTTCAGTCCGAG  2217

Query  341  ATCACTCCATGCAGAACATCAGAAAATTCATTTTTGAGATAACCGTTCCCAATGAAATGAGTATAGCAAACCAT  414
            .|.|||||.|||||||.||||.||..||||||||||||.|||..|||.|.||||...||||.|.||||||||||
Sbjct 2218  GTTACTCCTTGCAGAATATCATAACGTTCATTTTTGAGGTAATAGTTACAAATGCGGTGAGCACAGCAAACCAT  2291

Query  415  CAAGCATTAATTGACATTGGAGTCAATTCAGCATTGACT-----------------------------------  453
            ||||    .|||||||.|.||||||||||||.|||||||                                   
Sbjct 2292  CAAG----GATTGACAGTAGAGTCAATTCAGAATTGACTTGAGTTTGAGTTGACTTAAAACATTCAGTTGAAGC  2361

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 2362  ATTAATTGACATTAAAGTGTTTATGTTAAGAGGATTGGGCCAGGCGTGTGGCTCACGCCTGTAAATCCAGCACT  2435

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 2436  TTAGGAGCCCAAGGTGGATAGATCACTTGAGGTCATGAGTTTGAGATCAGCCTGGCCAACAGACGTCCTCACCA  2509

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 2510  GCGAGTTGGACTCTCGCCCTGGGCTCCTCATCGGCGCCTGGAGGGCAGCGCTGCAGCCCCACTCCCGGGAAGGC  2583

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 2584  CGCGTCCTCTGCCTGGTCCTGGGATCCTGCAGACCCCACCCCTGTCCGAAGGCGCCATCGCCCACCACCTCCCT  2657

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 2658  CCTCGTGCCGGCCCTGCTTCTCCCCAGTTCCAACCCCAGGAAAACGTGCTTCTCCTGGAGGCAACCCTCTTTTT  2731

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 2732  CCACCCTCGCCCTGTTGTTCCCGGAAGGCAGGCCTGGAATGTGAAGTTTCCAGGATTGATTTCCAAAGACTCAT  2805

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 2806  GCTATGTAAGGAAGCCACCAAGAAGGGCAAAGAAAAGGAGCCAGGGACGGCTCTTCCTCAGGGACACTAGACTT  2879

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 2880  TCAGGGATGTGGCTATAGATTTCTCTTTGGAGGAGTGGAAATGCCTGAACCCTGCACAGAGGGCTTTATACAGG  2953

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 2954  GAAGTGATGTTGGAGAACTACAGGAACCTGGAGTTTGTGGGTGAGGAAAATATCCCTCCAGACATGAGGAATCT  3027

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 3028  GCCCTTGTCTATCTTGGCTCTTCCTGGTTTTGTATTCTCTTTTGTGATGTTGCCCCATACATGCTTTTCATGTA  3101

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 3102  CATGTCATTGTTTTCTACAGTGATGACCCTCATATTTGTCATGGACAGCTTCTTAGAGACTCCCTTATGGAGTG  3175

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 3176  GTTTTACATAAAACCAGAAAATTCATGAAGAACACTTTGACTAATAAGATTGAACATCATCCTGCTCTAGGCAG  3249

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 3250  AGATGCCCCTGGAGGCCCTGAGCGGAATTGTCACCATGGCCCAGGATATGAGATAGAAAGCATCACACTGACTG  3323

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 3324  ACAAGTGTTTCCAGCTGCGCTTGTGGTTTTGTGTTTTTTGTTTCATTTTGTTTTTATGAGACAGAGTGTTGAAC  3397

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 3398  AGGTTGGAGTGCAGTGTCGTGATCTCAGCTCATTGCAACCTCCACCTTCTGGGCTCAAGCAATTCACATACCTG  3471

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 3472  AGCCTCCCAACCTAACTGAAATTACAGATGCATGTCACCATACCTGGCTAATTTTGTATTTTTTTTATTTTTAT  3545

Query  454  ------------------  453
                              
Sbjct 3546  TTTATTTTTATTTTTTTT  3563

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