Nucleotide Global Alignment

Description

Query:
TRCN0000466083
Subject:
NM_001004301.4
Aligned Length:
1855
Identities:
580
Gaps:
1197

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGCTCTTCCTCAGGGTCTATTGACATTCAGGGATGTGGCCATAGAATTCTCTCAGGAGGAGTGGAAATGCCT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGACCCTGCTCAGAGGACTCTATACAGGGACGTGATGCTGGAGAATTATAGGAACCTGGTCTCCCTGGATATCT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CTTCCAAATGCATGATGAAGGAGTTCTCATCAACAGCACAAGGCAATAGAGAAGTGATCCACACAGGGACATTG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CAAAGACATGAAAGTCATCACACTGGAGACTTTCGCTTTCAGGAAATTGATAAAGATATTCATAACTTAGAGTT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TCAGTGGCAAGAAGATGAAAGAAATAGCCATGAAGCACCCATGACAGAAATCAAAAAGTTGACTGGTAGTGCAG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  ACCGATATGATCAAAGGCATGCTGGAAACAAGCCTATTAAAGATCAGCTTGGATCAAGCTTTCATTCGCATCTG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CCTGAACTCCACATGTTTCAGACCCAAGGGAAAATTGGTAATCAAGTGGAGAAGTCTATCAACGATGCTTCCTC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  AATTTCAACATCCCAAAGAATTTCTTGTAGGCCCAAAACCCATATTTCTAATAACTATGGGAATAATTTCCGGA  592

Query    1  -----------------------------------ATGAGAGAAAAATCTTTCCAATGTAATGAGACTGGCAAA  39
                                               |||||||||||.|||||||||||||||||||.|||||||
Sbjct  593  ATTCTTCGTTACTCACACAAAAACAGGAGGTACACATGAGAGAAAAGTCTTTCCAATGTAATGAGAGTGGCAAA  666

Query   40  GCCTTTAATTGTAGCTCATTTGTAAGGAAACATCAGATAATCCATTTAGGAGAAAAACAATATAAATTTGATAT  113
            ||||||||||.|||||||.|..|||||||||||||.|||||||||||||||||.|||||||||||||.||||.|
Sbjct  667  GCCTTTAATTATAGCTCACTCTTAAGGAAACATCAAATAATCCATTTAGGAGAGAAACAATATAAATGTGATGT  740

Query  114  ATGTGGCAAAGTCTTTAATGAGAAGCGATACCTTGCACGCCATCGTAGATGTCACACTAGTGAGAAACCT----  183
            |||||||||.|||||||||..|||||||.||||.|...||||||||||||||||||||.|.|||||||||    
Sbjct  741  ATGTGGCAAGGTCTTTAATCGGAAGCGAAACCTAGTGTGCCATCGTAGATGTCACACTGGGGAGAAACCTTACA  814

Query  184  --------------------------------------------------------------------------  183
                                                                                      
Sbjct  815  GGTGTAATGAGTGTGGCAAGACTTTCAGTCAGACGTATTCCCTTACATGCCATCGTAGACTTCATACTGGAGAG  888

Query  184  --------------------------------------------------------------------------  183
                                                                                      
Sbjct  889  AAACCTTACAAATGTGAAGAATGTGACAAAGCTTTCAGTTTCAAATCAAACCTTAAAAGACATAGGAGAATTCA  962

Query  184  ----------------TACAAGTGTAATGAATGTGGAAAGTCCTTCAGTTACAAGTCATCCCTGACATGCCATC  241
                            ||||||||||||||||||||.|||.||||.|||.|.|.|||||||||.||||||||||
Sbjct  963  TGCTGGAGAAAAACCATACAAGTGTAATGAATGTGGCAAGACCTTTAGTCAGACGTCATCCCTTACATGCCATC  1036

Query  242  GTAGATGTCACACTGGTGAGAAACCTTACAAGTGTAATGAATGTGGAAAGTCCTTCAGTTACAAGTCATCCCTT  315
            |||||..|||.|||||.||||||||||.||||||||||||.|||||.|||.||||.|||...||||||||||||
Sbjct 1037  GTAGACTTCATACTGGAGAGAAACCTTTCAAGTGTAATGAGTGTGGCAAGACCTTTAGTCGGAAGTCATCCCTT  1110

Query  316  ACATGCCATCATAGGTGTCACACTGGTGAGAAACCTTACAAGTGTAATGAATGTGGAAAGTCCTTCAGTTACAA  389
            ||||||||||||||...|||.||.||.|||||||||||.|||||||||||||||||.|||.||||||||.|..|
Sbjct 1111  ACATGCCATCATAGACTTCATACGGGAGAGAAACCTTATAAGTGTAATGAATGTGGCAAGACCTTCAGTCAGGA  1184

Query  390  GTCATCCCTTAGATGCCATCGTAGACTTCATACTGG--------------------------------------  425
            ||.|.||||||.|||||||||||||||||||||.||                                      
Sbjct 1185  GTTAACCCTTAAATGCCATCGTAGACTTCATACCGGAGAGAAGCCTTACAAGTGTAATGAATGTGGCAAGGTTT  1258

Query  426  --AATA--------------------------------------------------------------------  429
              ||||                                                                    
Sbjct 1259  TTAATAAAAAGGCAAACCTTGCACGTCATCATAGACTTCATAGTGGAGAGAAACCCTACAAGTGTACTGAGTGT  1332

Query  430  ------------------------------------------------------------AAACCTTACAAGTG  443
                                                                        ||||.|||||||||
Sbjct 1333  GTCAAGACGTTCAGTCGAAATTCAGCCCTTGTAATTCATAAGGCTATTCATATTGGAGAGAAACGTTACAAGTG  1406

Query  444  TAATGAGTGTGGCAAGATGTTTGGTCAAAATTCAACCCTTGTAATTCATAAGGCAATTCATACTGGAGAGAAAC  517
            |||||||||||||||||.|||..|||.||.||||.||||.||||||||||.|||||||||||||||||||||||
Sbjct 1407  TAATGAGTGTGGCAAGACGTTCAGTCGAATTTCAGCCCTCGTAATTCATACGGCAATTCATACTGGAGAGAAAC  1480

Query  518  CTTACAAGTGTAATGAATGTGGCAAGGCTTTTAATCAACAATCACACCTTTCACGTCATCATAGACTTCATACT  591
            |||||||||||||||||||||||||||.||||||||...||.||||||||.||.||||||||||||||||||||
Sbjct 1481  CTTACAAGTGTAATGAATGTGGCAAGGGTTTTAATCGGAAAACACACCTTGCATGTCATCATAGACTTCATACT  1554

Query  592  GGAGAGAAACCTTACAAGTGTAATGACTGTGGTAAGGCTTTTATTC----ATCAGTCAAGCCTTGCATGTCATC  661
            ||||||||||||||||||||||||||.|||||.||||.|||||.||    |.||  ||  |||||||..|||||
Sbjct 1555  GGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCGAAAAACA--CA--CCTTGCACATCATC  1624

Query  662  A-------------------------------------------------------------------------  662
            |                                                                         
Sbjct 1625  ATAGACTTCATACTGGAGATAAACCTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCAAAAAGCACACCTT  1698

Query  663  --------------------------------------------------------------------------  662
                                                                                      
Sbjct 1699  GCACGTCACCATAGACTTCATACTGGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCAAAA  1772

Query  663  --------------------------------------------------------------------------  662
                                                                                      
Sbjct 1773  AGCAAACCTTGCACGTCATCATAGACTTCATACTGGAGAGAAACCTTACAAGTTTAATGAGTGTGGCAAAGCTT  1846

Query  663  -----  662
                 
Sbjct 1847  TTAAT  1851

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