Nucleotide Global Alignment

Description

Query:
TRCN0000466083
Subject:
XR_001753716.2
Aligned Length:
3805
Identities:
562
Gaps:
3163

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCAGACCAGGAAGCGGATCCCGTGGAGTGAAGGTCGCACCGCGGCGGATTGACTTCTAAAGACTTGGTACGTGA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGAAAAAACACGGAAGAGGAAGAGGAAAGCAAAGGAGTCAGGGATGGCTCTTCTTCAGGGTCTACTGACATTCA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GGGATGTGGCCATAGAATTCTCTCAGGAGGAGTGGAAATGCCTGGACCCTGCTCAGAGGACTCTATACAGAGAC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GTGATGCTGGAGAATTATAGGAACCTGGTCTCCCTGGATACCTCTTCCAAATGCATGATGAAGATGTTCTCATC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AACAGGACAAGGCAATACAGAAGTGGTCCACACAGGGACATTGCAAATACATGCAAGTCATCACATTGGAGATA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CTTGCTTCCAGGAAATTGAGAAAGATATTCATGACTTTGTGTTTCAGTGGCAAGAAAATGAAACAAATGGCCAT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GAAGCACTCATGACAAAAACCAAAAAGTTGATGAGTAGTACAGAGCGACATGATCAAAGGCATGCTGGAAACAA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  ACCTATTAAAAATGAGCTTGGATCAAGCTTTCATTCGCATCTGCCTGAAGTGCACATATTTCACCCCGAAGGGA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  AAATTGGTAATCAAGTTGAGAAGGCTATCAACGATGCTTTCTCAGTTTCAGCATCCCAACGAATTTCCTGTAGG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CCAAAAACTCGTATTTCTAATAAGTATAGGAATAATTTCCTCCAGTCTTCATTACTCACACAAAAACGGGAAGT  740

Query    1  ----ATGAGAGAAAAATCTTTCCAATGTAATGAGACTGGCAAAGCCTTTAATTGTAGCTCATTTGTAAGGAAAC  70
                |..||||||||||||||||||.|||||||||.||||||||||||||||.||||||||.|..|||..||||
Sbjct  741  ACACACAAGAGAAAAATCTTTCCAACGTAATGAGAGTGGCAAAGCCTTTAATGGTAGCTCACTCTTAAAAAAAC  814

Query   71  ATCAGATAATCCATTTAGGAGAAAAACAATATAAATTTGATATATGTGGCAAAGTCTTTAATGAGAAGCGATAC  144
            ||||||||||||||||||||||.|||||.|||||||.||||.||||.|||||.|.||||.||.|||||||||||
Sbjct  815  ATCAGATAATCCATTTAGGAGACAAACAGTATAAATGTGATGTATGCGGCAAGGACTTTCATCAGAAGCGATAC  888

Query  145  CTTGCACGCCATCGTAGATGTCACACTAGTGAGAAACCTTACAAGTGTAATGAATGTGGAAAGTCCTTCAGTTA  218
            ||||||.||||   |||||||||||||.|||||||.|||||||.|||||||||.|||||.|||.|.||||||.|
Sbjct  889  CTTGCATGCCA---TAGATGTCACACTGGTGAGAATCCTTACACGTGTAATGAGTGTGGCAAGACATTCAGTCA  959

Query  219  CAAGTCATCCCTG-------ACATGCCATCGTAGATGTCACACTGGTGAGAAACCTTACAAGTGTAATGAATGT  285
            |||.|||.|||||       |||.|.||      || |||.|||||.|||||||||||||||||||||||||||
Sbjct  960  CAATTCAGCCCTGTTAGTTCACAAGGCA------AT-TCATACTGGAGAGAAACCTTACAAGTGTAATGAATGT  1026

Query  286  GGAAAGTCCTTCAGTT--------ACAAGTCATCCCTTACATGCCATCATAG-GTGTCACACTGGTGAGAAACC  350
            ||.|||       |||        |||| |||..||||.||.|.|||||||| || |||.|||||.||||||||
Sbjct 1027  GGCAAG-------GTTTTTAATCAACAA-TCAAACCTTGCACGTCATCATAGAGT-TCATACTGGAGAGAAACC  1091

Query  351  TTACAAGTGTAATGAATGTG-GAAAGTCCTTCAGTTACAAGTCATCCCTTAGATGCCATCGTAGACTTCATACT  423
            ||||||.|||.|.||||||| .||||| .||||||..|||.|||..||||..|.|.|||.|.|||.||||.|||
Sbjct 1092  TTACAAATGTGAAGAATGTGACAAAGT-TTTCAGTCGCAAATCACACCTTGAAAGACATAGGAGAATTCACACT  1164

Query  424  GGA--------ATA------------------------------------------------------------  429
            |||        |||                                                            
Sbjct 1165  GGAGAGAAACCATACAAATGTAAGGTTTGTGACAAGGCTTTCAGACGTGATTCACACCTGGCACAACATACTGT  1238

Query  430  ----------------AAACCTTACAAGTGTAATGAGTGTGGCAAGATGTTTGGTCAAAATTCAACCCTTGTAA  487
                            |||||||||||||||||||||||||||||||..||||.||||||||||.|.|||||||
Sbjct 1239  AATTCACACTGGAGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTTGTTCAAAATTCATCTCTTGTAA  1312

Query  488  TTCATAAGGCAATTCATACTGGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGCTTTTAATCAACAATCA  561
            |.|||||||..|||||||||||||||||||.||||||||||||||||||||||||||.|||||||||..|||||
Sbjct 1313  TGCATAAGGTCATTCATACTGGAGAGAAACGTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCACAAATCA  1386

Query  562  CACCTTTCACGTCATCATAGACTTCATACTGGAGAGAAACCTTACAAGTGTAATGACTGTGGTAAGGCTTTTA-  634
            .|||||.||.||||||.|||||||||||||||||||||||||||||||||||||||.|||||.||||.||||| 
Sbjct 1387  AACCTTGCATGTCATCGTAGACTTCATACTGGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGTTTTTAA  1460

Query  635  --------------------------------TTCAT-------------------------------------  639
                                            |||||                                     
Sbjct 1461  TCGAAAATCAAACCTTGAACGTCATCATAGACTTCATACTGGAAAGAAATCTTAGAAGTGTAAATTTGCAAGGT  1534

Query  640  ----------CAGTCAAGCCTTGCATGTCATCA-----------------------------------------  662
                      |||||||.|||||||||||||||                                         
Sbjct 1535  TTTTAGGCAACAGTCAAACCTTGCATGTCATCATAGACTTTATACTGGAGAGAAACCTTACAAATGTGAAGAAT  1608

Query  663  --------------------------------------------------------------------------  662
                                                                                      
Sbjct 1609  GTGACAAAAGTTTTCAATTTCAAATCACTCCTTGAAATACATAGGAGAGTTCATACTGGAGAGAAACCATACAA  1682

Query  663  --------------------------------------------------------------------------  662
                                                                                      
Sbjct 1683  ATGTAAGGTTTGTGACAAGGATTTCGGGTGTGATTCACACCTGGCCCAACATACTGGAATTCACACTGGAAAGG  1756

Query  663  --------------------------------------------------------------------------  662
                                                                                      
Sbjct 1757  AACTGTACAAGTGTAATGAGTGTGGCAGAGCCTTTGGTGGTCAGTCAACACTTACTCACCATCAAGCAATCCAT  1830

Query  663  --------------------------------------------------------------------------  662
                                                                                      
Sbjct 1831  GGTATAGGGAAACTTGACTAATGTAATGATTGTCACAAAGTCTTCAGTAATATTACAGCCATTGCAAAACATTG  1904

Query  663  --------------------------------------------------------------------------  662
                                                                                      
Sbjct 1905  GAGAATCCATAATGAAGGAGGTCTTACAAGTGTAATAAATGTGGCAAGTTTTTCAGACATCATTCATAACTTGC  1978

Query  663  --------------------------------------------------------------------------  662
                                                                                      
Sbjct 1979  AGTTCATTGGCGATCTTATACAGGAGAGAAATCTTACAAATGTGATGATTGTGGCAAGGTCTTCAGTCAAGCTT  2052

Query  663  --------------------------------------------------------------------------  662
                                                                                      
Sbjct 2053  CATCTTTTGCAAAACGGGAGAATTCATACAGGAGAGAAACCTCACAAGTGTGATGATTGTGAGCAAAGCCTTTA  2126

Query  663  --------------------------------------------------------------------------  662
                                                                                      
Sbjct 2127  CTTCACGTTCACACCACATTAGATATCAGAGGATCCATACTGGACAGAAATCTTACAAACGTCCTATGTGTGGC  2200

Query  663  --------------------------------------------------------------------------  662
                                                                                      
Sbjct 2201  AAGGTCTTCAGTCCGAGGTTACTCCTTGCAGAATATCATAACGTTCATTTTTGAGGTAATAGTTACAAATGCGG  2274

Query  663  --------------------------------------------------------------------------  662
                                                                                      
Sbjct 2275  TGAGCACAGCAAACCATCAAGGATTGACAGTAGAGTCAATTCAGAATTGACTTGAGTTTGAGTTGACTTAAAAC  2348

Query  663  --------------------------------------------------------------------------  662
                                                                                      
Sbjct 2349  ATTCAGTTGAAGCATTAATTGACATTAAAGTGTTTATGTTAAGAGGATTGGGCCAGGCGTGTGGCTCACGCCTG  2422

Query  663  --------------------------------------------------------------------------  662
                                                                                      
Sbjct 2423  TAAATCCAGCACTTTAGGAGCCCAAGGTGGATAGATCACTTGAGGTCATGAGTTTGAGATCAGCCTGGCCAACA  2496

Query  663  --------------------------------------------------------------------------  662
                                                                                      
Sbjct 2497  GACGATTGATTTCCAAAGACTCATGCTATGTAAGGAAGCCACCAAGAAGGGCAAAGAAAAGGAGCCAGGGACGG  2570

Query  663  --------------------------------------------------------------------------  662
                                                                                      
Sbjct 2571  CTCTTCCTCAGGGACACTAGACTTTCAGGGATGTGGCTATAGATTTCTCTTTGGAGGAGTGGAAATGCCTGAAC  2644

Query  663  --------------------------------------------------------------------------  662
                                                                                      
Sbjct 2645  CCTGCACAGAGGGCTTTATACAGGGAAGTGATGTTGGAGAACTACAGGAACCTGGAGTTTGTGGGCTTGAGTGC  2718

Query  663  --------------------------------------------------------------------------  662
                                                                                      
Sbjct 2719  AAGCCACGATCTCGCCTCACCACAACCTCCGTCTCCCGAGTTCAAGCGATTCTCCTGCCTCAGCTTCCCGAGTA  2792

Query  663  --------------------------------------------------------------------------  662
                                                                                      
Sbjct 2793  GCTGGGATTACAGGTATGAACCACTATGCCCGGCTAACTTTGTTTTTTTTTTTTAGAAATTAAACCTTTTTTCA  2866

Query  663  --------------------------------------------------------------------------  662
                                                                                      
Sbjct 2867  GCTTAATGACCCAGGGGTGTATTTTTGAAGGACTTGGGAGCTCTCTTTGAAAGGCAAACAACAAGGGAAACAGT  2940

Query  663  --------------------------------------------------------------------------  662
                                                                                      
Sbjct 2941  ACCTTTATCTCAGTAGGAAATTAAATAATTCAAACATCAAATAACTTCAATTTAAGGCTATGGACTTTGAGATA  3014

Query  663  --------------------------------------------------------------------------  662
                                                                                      
Sbjct 3015  ATTCTGAGCCTTGAGAGGAATGTGGTCAGGCAACCTGAGTCCAGTGGAATGCAGGTGCAACTTCTAAGAGTTTT  3088

Query  663  --------------------------------------------------------------------------  662
                                                                                      
Sbjct 3089  CCTGTAAGTAATTAAGAAGACTAAGTAGCCCCAGAGATAAGACCTCCTCGGATCATTGTCCCTTCTTATGTAGT  3162

Query  663  --------------------------------------------------------------------------  662
                                                                                      
Sbjct 3163  GATAAAGTAACCTTCCTTGAAGTGTATCTATCCGTAATCAATCAAGTTGCTGCAGCCTATGCACTGGCCCAGAA  3236

Query  663  --------------------------------------------------------------------------  662
                                                                                      
Sbjct 3237  TAAAAAACGTGGTGATTCTGCTAAAGCTTCTCTGTCTTTCCCTGTGTGTGAAATCTTAACGTCTCTACTTGGGA  3310

Query  663  --------------------------------------------------------------------------  662
                                                                                      
Sbjct 3311  ACGCTGATCCCATTCATTTAGAGTTGATGTTTCCACGTGGCTATTTCCAAGCTTTGCCTTCAAATAAATTCTGT  3384

Query  663  --------------------------------------------------------------------------  662
                                                                                      
Sbjct 3385  ACTTAATCATATATTCTAAATTTTATTATTTACTGCTGACATCAGTTTCTGTCGGATTGTAGGAGCCTCACCAG  3458

Query  663  --------------------------------------------------------------------------  662
                                                                                      
Sbjct 3459  AGAGGGCCCCTGTCGCCATGTTGTAAAACTCACACTTGCCAAAAGTTGTGGGTTAGGGTTTCTCCCCCTCCCTC  3532

Query  663  --------------------------------------------------------------------------  662
                                                                                      
Sbjct 3533  AGGATGACGCTAGTTAGCTGACACAGATGGTCACCTCCATTACCAAGTAGAGTCAGGATGAACTATGTGTGACT  3606

Query  663  --------------------------------------------------------------------------  662
                                                                                      
Sbjct 3607  GTTCAACTATGTGTCCTCTTCCCTGAGGACTGATTAGTGTTTATCTTGAAAACATGTCCTTAATGGGTTGTATA  3680

Query  663  --------------------------------------------------------------------------  662
                                                                                      
Sbjct 3681  GAACACTGAAGCATCTGATTTCAAACTCTTAGCTCTTTTCCTCTATTTCCCATCACATTCTGGTCTAAGGCTTA  3754

Query  663  -------------------------------  662
                                           
Sbjct 3755  TTTATTAATAAAATGATTTTTATTTCTTTAT  3785

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