Nucleotide Global Alignment

Description

Query:
TRCN0000466539
Subject:
NM_018918.2
Aligned Length:
2800
Identities:
390
Gaps:
2405

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGCGAGTCCACCTAGGGGCTGGGGCTGCGGAGAGCTGCTGCTGCCCTTCATGCTCCTGGGGACGCTGTGCGA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GCCAGGATCCGGGCAGATCCGCTACTCGATGCCGGAGGAGCTGGACAAAGGCTCCTTCGTCGGCAACATAGCCA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AGGACCTTGGGCTGGAGCCCCAGGAGCTGGCGGAGCGCGGAGTCCGCATCGTCTCCAGAGGTAGGACGCAGCTT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TTTGCCCTGAACCCGCGAAGCGGCAGCTTGGTCACCGCGGGCAGGATAGACCGGGAGGAGCTCTGCGCTCAGAG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CCCACTGTGTGTGGTGAACTTTAACATCTTGGTTGAGAACAAAATGAAAATTTATGGAGTAGAAGTAGAAATAA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TCGATATTAATGATAACTTCCCGCGTTTCCGGGATGAAGAGTTAAAAGTAAAAGTTAATGAAAATGCGGCTGCA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GGGACACGGTTAGTGCTTCCCTTCGCGCGGGATGCGGATGTGGGTGTGAACTCTCTCCGGAGTTACCAGCTCAG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CTCCAATCTGCACTTCTCTCTGGATGTGGTAAGCGGAACTGATGGACAAAAGTATCCGGAGCTGGTGTTGGAAC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  AGCCCCTAGACCGCGAGAAAGAGACTGTTCACGACCTCCTCCTCACAGCTTTAGATGGCGGAGACCCGGTACTC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TCCGGCACCACGCACATCCGTGTTACGGTCCTCGACGCAAACGACAATGCGCCCCTGTTCACCCCATCCGAGTA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CAGCGTGAGTGTTCCAGAGAACATACCTGTGGGCACTCGGCTGCTCATGCTAACCGCCACGGATCCAGATGAGG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  GAATAAACGGGAAATTGACCTACTCTTTTCGCAATGAAGAAGAAAAAATTTCGGAGACTTTCCAACTTGATTCC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  AACCTGGGGGAAATCTCAACTCTACAATCACTGGACTATGAAGAATCCAGATTCTACCTCATGGAAGTGGTAGC  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  TCAGGATGGAGGCGCTCTTGTTGCCAGCGCTAAGGTGGTGGTCACAGTACAGGACGTGAATGACAATGCCCCCG  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  AAGTGATCCTCACCTCTCTGACCAGTTCGATCTCTGAAGACTGTCTTCCCGGAACTGTAATCGCGCTGTTTAGC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GTACATGATGGTGATTCTGGAGAAAATGGTGAGATTGCATGCTCTATTCCTAGGAATTTGCCTTTTAAATTGGA  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  GAAGTCAGTTGATAATTACTATCACCTATTAACAACTAGGGACCTGGACAGAGAAGAGACTTCAGATTATAATA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  TCACTTTAACCGTCATGGACCATGGAACCCCGCCCCTCTCTACAGAAAGCCACATCCCCTTGAAAGTAGCAGAC  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GTTAATGACAACCCACCCAATTTCCCTCAAGCCTCCTACTCCACCTCTGTCACAGAAAACAATCCCAGAGGTGT  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  CTCTATCTTCTCTGTGACAGCCCATGACCCCGACAGCGGCGACAACGCTCGAGTCACCTACTCCCTGGCTGAAG  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  ACACATTTCAGGGGGCGCCCTTGTCCTCCTATGTATCCATTAACTCTGACACCGGTGTCCTGTATGCTCTGAGA  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  TCCTTCGACTATGAGCAGTTGAGAGACCTACAGTTGTGGGTGACAGCCAGCGACAGTGGGAACCCTCCACTTAG  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  CAGCAACGTGTCGCTGAGCCTGTTTGTGCTGGACCAGAACGACAATACGCCTGAGATCCTGTACCCCGCCCTCC  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  CCACAGACGGTTCCACGGGCGTGGAGCTGGCGCCTCGCTCCGCAGAACCTGGCTACCTGGTGACCAAGGTGGTA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  GCGGTGGACAAAGATTCAGGCCAGAACGCCTGGCTGTCCTACCGCCTGCTTAAGGCCAGCGAGCCAGGACTCTT  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  TGCGGTTGGGCTGCACACGGGCGAGGTGCGCACAGCGCGAGCCCTGCTGGACAGAGACGCGCTCAAGCAGAGCC  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  TCGTGGTGGCCGTCGAAGACCATGGCCAGCCCCCTCTGTCAGCCACCTTCACGGTCACCGTTGCCGTGGCCGAC  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  AGGATCCCTGACATCCTGGCTGACCTAGGCAGTATCAAGACCCCCATTGACCCTGAGGATCTGGACCTCACACT  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  CTATCTTGTGGTGGCAGTGGCTGCAGTCTCCTGCGTCTTCCTGGCCTTCGTCATCGTGCTGCTGGTGCTCAGAC  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  TGAGGCGCTGGCACAAGTCACGCCTGCTTCAGGCTGAAGGCAGCAGGTTGGCGGGTGTGCCCGCCTCGCACTTT  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  GTGGGCGTGGATGGGGTTCGGGCTTTCCTGCAGACCTATTCCCACGAGGTCTCCCTCACCGCGGACTCGAGGAA  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  GAGTCACCTGATCTTTCCCCAGCCCAACTACGCAGACACGCTCCTTAGTGAAGAGAGCTGTGAGAAAAGCGAGC  2368

Query    1  -----------------ATGGTCCCAGAGGCCTG--------GAGGAGCGG-----ACTGCAAGCCCCGCCCAA  44
                             |.|||   |||    ||        ||.||.|||     .|.|||||||||||||||
Sbjct 2369  CTCTTCTGATGTCTGATAAGGT---AGA----TGCAAACAAAGAAGAACGGCGAGTTCAGCAAGCCCCGCCCAA  2435

Query   45  CACGGACTGGCGTTTCTCTCAGGCCCAGAGACCCGGCACCAGCGGCTCCCAAAATGGCGATGACACCGGCACCT  118
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2436  CACGGACTGGCGTTTCTCTCAGGCCCAGAGACCCGGCACCAGCGGCTCCCAAAATGGCGATGACACCGGCACCT  2509

Query  119  GGCCCAACAACCAGTTTGACACAGAGATGCTGCAAGCCATGATCTTGGCGTCCGCCAGTGAAGCTGCTGATGGG  192
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2510  GGCCCAACAACCAGTTTGACACAGAGATGCTGCAAGCCATGATCTTGGCGTCCGCCAGTGAAGCTGCTGATGGG  2583

Query  193  AGCTCCACCCTGGGAGGGGGTGCCGGCACCATGGGATTGAGCGCCCGCTACGGACCCCAGTTCACCCTGCAGCA  266
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2584  AGCTCCACCCTGGGAGGGGGTGCCGGCACCATGGGATTGAGCGCCCGCTACGGACCCCAGTTCACCCTGCAGCA  2657

Query  267  CGTGCCCGACTACCGCCAGAATGTCTACATCCCAGGCAGCAATGCCACACTGACCAACGCAGCTGGCAAGCGGG  340
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2658  CGTGCCCGACTACCGCCAGAATGTCTACATCCCAGGCAGCAATGCCACACTGACCAACGCAGCTGGCAAGCGGG  2731

Query  341  ATGGCAAGGCCCCAGCAGGTGGCAATGGCAACAAGAAGAAGTCGGGCAAGAAGGAGAAGAAG  402
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2732  ATGGCAAGGCCCCAGCAGGTGGCAATGGCAACAAGAAGAAGTCGGGCAAGAAGGAGAAGAAG  2793

GPP Web Portal Terms of Service

Effective Date: December 8, 2025
By using this site, you agree to our terms and conditions below.

Overview of Terms

The data made available on this website were generated for research purposes and are not intended for clinical or commercial uses. Commercial use (or other use for profit-making purposes) of the GPP Web Portal and its tools, is not permitted under these terms and may require a separate license agreement from Broad or its contributors. For more information, please contact partnering@broadinstitute.org.

The original data may be subject to rights claimed by third parties, including but not limited to, patent, copyright, other intellectual property rights, biodiversity-related access and benefit-sharing rights. It is the responsibility of users of Broad Institute services to ensure that their use of the data does not infringe any of the rights of such third parties.

Any questions or comments concerning these Terms of Use can be addressed to: legal@broadinstitute.org.

By accessing and viewing this GPP Web Portal, you agree to the following terms and conditions:

Attribution

You agree to acknowledge the Broad Institute (e.g., in publications, services or products) for any of your use of its online services, databases or software in accordance with good scientific practice. You agree to use the acknowledgment wording provided for the relevant tools as indicated on the FAQ for each tool.

Updating the Terms of Use

We reserve the right to update these Terms of Use at any time. When alterations are inevitable, we will attempt to give reasonable notice of any changes by placing a notice on our website, but you may wish to check each time you use the website. The date of the most recent revision will appear on this, the "GPP Web Portal Terms of Use" page. If you do not agree to these changes, please do not continue to use our online services. We will also make available an archived copy of the previous Terms of Use for comparison.

Indemnification and Disclaimer of Warranties

You are using this GPP Web Portal at your own risk, and you hereby agree to hold Broad and its contributors and their trustees, directors, officers, employees, and affiliated investigators harmless for any third party claims which may arise from your use of the GPP Web Portal, the tools available therein, or any portion thereof. Further, you agree to indemnify Broad, its contributors, and its and their trustees, directors, officers, employees, affiliated investigators, students, and affiliates for any loss, costs, claims, damages, or other liabilities arising from any unpermitted commercial or profit-making use you make of the GPP Web Portal. The GPP Web Portal is a research tool and is provided "as is". Broad does not represent that the GPP Web Portal is free of errors or bugs or suitable for any particular tasks.

ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, NONINFRINGEMENT, OR THE ABSENCE OF LATENT OR OTHER DEFECTS ARE DISCLAIMED. IN NO EVENT SHALL BROAD OR ITS CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THE GPP WEB PORTAL, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

Governing Law

The terms and conditions herein shall be construed, governed, interpreted, and applied in accordance with the internal laws of the Commonwealth of Massachusetts, U.S.A. Furthermore, by accessing, downloading, or using the Database, You consent to the personal jurisdiction of, and venue in, the state and federal courts within Massachusetts with respect to Your download or use of the Database.