Nucleotide Global Alignment

Description

Query:
TRCN0000466539
Subject:
NR_160734.1
Aligned Length:
3234
Identities:
365
Gaps:
2832

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ACGTGGAGCGTTTGGGTTTTCTTCCTGGTTGGAAGTAATTCGCGAAGCCTCCTCCCTTCACACTGGTGCGGGAG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AAGGATGGAGCGCAGCAGCGTGAAGCTAGGGAGCAGGACCCCGTGGAGGCAAGTACTCTTTCCCTTCTTGCTGC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CTTTGTTCTGCACGGGGCTCTCAGAGCAAGTCCGGTACTCTATTCCGGAAGAAATGGCCATGGGTTCAGTCGTG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GGAAATCTCGCTGAGGACCTGGGGCTGCCTGTTCAGGACTTACTGACAAGAAACCTTAGAGTTATTGCAGAGAA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  ACCGTATCTTTCTGTGAACCCAGAGAACGGGAACATAGTTGTGAGCGACAGAATAGACCGAGAGTTTCTCTGCT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TCCAAAGCCCTCTGTGCGTCCTGCCCTTAGAGATTGTGGCAGAAAATCCCCTAAACGTTTTTCACGTCAGCGTG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GTGATAGAAGATATAAATGATAACCCTCCCCGTTTCCTCCAAAATAGCATTGTTTTGCAAATCAATGAACTTGC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GATTCCAGGCACTAGGTTTGGCCTGGAATCTGCCATAGATGCAGATGTAGGGCTGAACTCTCTCCAGAGTTACC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  AACTCAGTTTGAATGAGCACTTCTCTCTGGTGGTAAAGGACAACACTGAAGGAAAGGATGCCCCCGAATTAGTG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TTGGAGAAGCCTCTGGACAGGGAAAAACAGAGCTCCCAGCTCTTGGTCCTAACCGCAGTAGATGGGGGAGAACC  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  AGTCCTAACGGGCACCGCTCAGATTCAGATCGAGGTCACTGATGCCAATGATAACCCCCCAGTGTTCAGCCAAA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  GTACGTACAAAGTCAGTCTTAGAGAGGACATGGCCGCAGGCACGTCTGTGCTAACAGTGATAGCCACTGACCAG  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GATGAGGGTGTCAACGCAGAAGTCACCTACTCCTTCAAATCACTAGGAGAAGATATTAGAGATAAGTTTATCCT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AGATCATCAAAGTGGAGAAATTAAATCCAAAGGCCCTATTGACTTTGAAACCAAGAGGACTTACACCATGAACA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  TAGAGGCCAAGGACGGTGGAGGCATGGCCTCAGAATGTAAAGTTGTAGTGGAAATTCTCGATGAGAACGACAAT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GCCCCAGAAGTGGTTTTTACTTCCGTGTCCAATTCTATAACCGAAGATGCAGAACCGGGGACAGTGGTGGCTCT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  GTTCAAAACGTATGATAAAGATTCAGAAGAAAATGGAAGAGTGAGTTGCTTCGTAAAAGAAACGGTTCCTTTTA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  GGATTGAATCTTCTGCCAGCAATTACTATAAGCTTGTAACAGATGGGATCCTGGACCGGGAGCAGACTCCAGAG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  TACAACGTCACCATCATCGCCACTGATAAAGGCAAGCCCCCTCTCTCTTCCAGCACAAGCGTTACCCTGCATGT  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TGGGGATATCAATGACAATGCTCCAGTTTTCCACCAGACCTCCTATTTGATCCAAGTGGCTGAGAACAACCCTC  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  CTGGAGCTTCCATTGCTCAGGTCAGCGCCTTCGACCCGGATTTGGGATCCAATGGTTTCATCTCCTACTCCATC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  ATAGCCAGCGACCTAGAGCCTAAATCACTGTGGTCCTACGTGTCGGTGAACCAGGATAGTGGCGTGGTGTTCGC  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  GCAGCGCGCCTTCGACCACGAACAGCTGCGCTCCTTCCAGCTGACACTGCAGGCGCGCGACCAGGGAAAGCCCT  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  CGCTCAGCGCCAACGTGAGCATGCGGGTGCTGGTGGGTGACCGCAACGACAACGCGCCACGCGTGCTGTATCCC  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  ACACTCGAGCCCGACGGCTCTGCGCTCTTCGACATGGTGCCGCGTGCTGCCGAGCCCGGATACCTGGTCACCAA  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  AGTGGTGGCGGTGGATGCAGACTCTGGACACAATGCCTGGCTATCTTACCACGTGCTGCAGGCCAGCGATCCCG  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  GGCTCTTCAGCCTGGGACTGCGCACAGGCGAGGTGCGCACAGCGCGTGCCCTGGGAGACAGGGACTCAGCGCGG  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  CAGCGCCTTCTGGTCGCTGTGCGTGATGGTGGACAACCACCGCTCTCGGCTACAGCCACGCTGCACCTCATCTT  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  CGCTGACAGCCTGCAGGAGGTCCTGCCAGACCTCAGAGATGAACCTTTGCTGTCTGACTCCCAAAGTGAGCTTC  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  AGTTTTACCTGGTGGTGGCCTTGGCCTTGGTCTCAGTGCTCTTTCTTTTCGTTGTGATCCTGGCCATTGTCCTT  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  CGCCTTCGACAGTCCCATGGTCCTGCTGTCTCAGACTATTTTCAGTCGGGCCTCTGCTGTAAGACGAGACCAGA  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  GGTTTCTCTCAACTAAGGCGAGGGGACTCTTCCTTATTCCTACAATCTCTATGTTGCCTCCAATTGTCAAAAGA  2368

Query    1  --------------------------------ATGGTCCC----AGAGGCCT----------------------  16
                                            ||||||||    .|||.|||                      
Sbjct 2369  CAATTTCTCAATTTCTTACCTTGACTCCAGAAATGGTCCCTCCGCGAGACCTTTGTACGGAAGCTTCTGTAGCA  2442

Query   17  -----------GGAGGAG----------------CGGA----------------CTGCAAGCCCCGCCCAACAC  47
                       .||||||                ||||                |..|||||||||||||||||
Sbjct 2443  GTGAGTGTCGCTGAGGAGAATAACAAGATAGTCTCGGATTCTATTGCTTCTAATCACCAAGCCCCGCCCAACAC  2516

Query   48  GGACTGGCGTTTCTCTCAGGCCCAGAGACCCGGCACCAGCGGCTCCCAAAATGGCGATGACACCGGCACCTGGC  121
            .|||||||||||||||||.|||||||||||||||||.|||||.|||||||||||.|||||.||.||||||||||
Sbjct 2517  TGACTGGCGTTTCTCTCAAGCCCAGAGACCCGGCACGAGCGGATCCCAAAATGGTGATGAAACTGGCACCTGGC  2590

Query  122  CCAACAACCAGTTTGACACAGAGATGCTGCAAGCCATGATCTTGGCGTCCGCCAGTGAAGCTGCTGATGGGAGC  195
            ||||||||||||||||.|||||||||||||||||||||||||||||.||.|||||.||||||||||||||||||
Sbjct 2591  CCAACAACCAGTTTGATACAGAGATGCTGCAAGCCATGATCTTGGCCTCTGCCAGCGAAGCTGCTGATGGGAGC  2664

Query  196  TCCACCCTGGGAGGGGGTGCCGGCACCATGGGATTGAGCGCCCGCTACGGACCCCAGTTCACCCTGCAGCACGT  269
            ||.||||||||||||||.||.|||||||||||..|||||||.||.||||||||||||||.||||||||||||||
Sbjct 2665  TCTACCCTGGGAGGGGGCGCTGGCACCATGGGTCTGAGCGCTCGATACGGACCCCAGTTTACCCTGCAGCACGT  2738

Query  270  GCCCGACTACCGCCAGAATGTCTACATCCCAGGCAGCAATGCCACACTGACCAACGCAGCTGGCAAGCGGGATG  343
            |||.||||||||||||||.||.||||||||.||||||||||||||.||||||||.||.||||||||.||.||||
Sbjct 2739  GCCTGACTACCGCCAGAACGTGTACATCCCTGGCAGCAATGCCACGCTGACCAATGCCGCTGGCAAACGAGATG  2812

Query  344  GCAAGGCCCCAGCAGGTGGCAATGGCAACAAGAAGAAGTCGGGCAAGAAGGAGAAGAAG---------------  402
            |||||||.|||||||||||.|||||||||||||||||.|||||||||||.|||||||||               
Sbjct 2813  GCAAGGCTCCAGCAGGTGGTAATGGCAACAAGAAGAAATCGGGCAAGAAAGAGAAGAAGTAATATGGAGGCCAG  2886

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 2887  GCCTTGAACCACAAGGCAGCCTCCCTCCCCAGCCAGTCCAGCTCGTCCTTACTTGTACCCAGGCCTCAGAATTT  2960

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 2961  CAGGGCTCACCCCAGGATACTGGTAGGAGCCAGGGCCATGCTCCCCGTTGGGAAACAGAAACACGTGCCCAAGC  3034

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 3035  CAACACCCCCTCTCTATACCCTAGGGAGTTGAATATGCAAAGAGAGTTCTGCTGGGACCCCCCTATTCAATCAG  3108

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 3109  TGATTGTACCCACATGGGTAGCAGGGTTTGTGTGTGTGGACATACACACACACACACACACACACACACACAAA  3182

Query  403  ----------------------------------------------------  402
                                                                
Sbjct 3183  CCATGCCACACTCCCTTAGTTACAGCTGAACTCCTCCATCTTCCAACCCAGG  3234

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