Nucleotide Global Alignment

Description

Query:
TRCN0000466541
Subject:
XM_006496303.2
Aligned Length:
2585
Identities:
2224
Gaps:
10

Alignment

Query    1  ATGATGAGCATCAAAGCCTTTACGCTT-GTCTCTGCTGTGGAGCGGGAGCTGCTGATGGGCGACAAGGAGCGCG  73
            |||||||.||||||.|||||.|| ||| ||||||||.|||||.|||||.||||||||||||||||..||.|.|.
Sbjct    1  ATGATGAACATCAAGGCCTTCAC-CTTGGTCTCTGCAGTGGAACGGGAACTGCTGATGGGCGACAGAGACCACA  73

Query   74  TCAACATAGAGTGCGTGGAGTGCTGCGGCAGGGACCTCTACGTGGGCACCAACGACTGCTTCGTCTACCACTTC  147
            |||.|||.|||||.|||||||||||.||||||.|.||.||.||.||||||||.|||||||||.|.|||||.|||
Sbjct   74  TCAGCATTGAGTGTGTGGAGTGCTGTGGCAGGAATCTTTATGTCGGCACCAATGACTGCTTCATTTACCATTTC  147

Query  148  CTGTTGGAGGAG-AGGCCAGTGCCTGCTGGGCCAGCCACGTTCACTGCCACCAAACAGCTGCAGAGACACTTGG  220
            |||.|||||||| |||||| |||||.|.|||.||||.||.|||..|||||||||||||||.||.||||||.|||
Sbjct  148  CTGCTGGAGGAGAAGGCCA-TGCCTACAGGGACAGCTACATTCGTTGCCACCAAACAGCTACACAGACACCTGG  220

Query  221  GCTTCAAGAAGCCCGTGAACGAGCTGCGCGCGGCCTCAGCACTCAACAGGCTGCTGGTGCTGTGTGACAACTCC  294
            ||||||||||.||.||||||||||||.|.|||||||||||.|||||.||||||||||||||.|||||||||||.
Sbjct  221  GCTTCAAGAAACCTGTGAACGAGCTGTGTGCGGCCTCAGCTCTCAATAGGCTGCTGGTGCTCTGTGACAACTCT  294

Query  295  ATCAGCCTGGTCAACATGCTGAACCTCGAGCCAGTGCCTTCGGGGGCCCGCATCAAGGGGGCAGCCACGTTTGC  368
            ||.|.||||||.||||||||||||||.||||||||.||.||.||.|||||||||||.|||||..|.||.|||||
Sbjct  295  ATAACCCTGGTTAACATGCTGAACCTGGAGCCAGTCCCCTCAGGAGCCCGCATCAAAGGGGCTACAACATTTGC  368

Query  369  ACTGAACGAGAACCCTGTGAGTGGGGACCCCTTCTGTGTAGAAGTTTGCATCATCTCTGTCAAACGCAGAACCA  442
            |.|||||||||.|||.||||.|||||||||.|||||.||.||.||.||||||||.||.||.||.|||||.||..
Sbjct  369  AGTGAACGAGAGCCCCGTGAATGGGGACCCGTTCTGCGTGGAGGTGTGCATCATTTCCGTGAAGCGCAGGACTG  442

Query  443  TCCAGATGTTTCTGGTGTACGAGGACCGGGTGCAGATCGTCAAGGAGGTGTCGACTGCCGAACAGCCCCTCGCT  516
            ||||.||||||||||||||.||||||||.||||||||.||||||||.|||||.||..|.||.|||||.||.|||
Sbjct  443  TCCAAATGTTTCTGGTGTATGAGGACCGAGTGCAGATTGTCAAGGAAGTGTCCACCCCAGAGCAGCCTCTTGCT  516

Query  517  GTGGCTGTGGACGGCCACTTCCTGTGTCTGGCTCTGACCACTCAGTACATCATCCACAATTACAGCACAGGCGT  590
            |||||||||||.|||.|.|||.||||.|||||..|||||||.||.||||||||||..||.||||||||||||.|
Sbjct  517  GTGGCTGTGGATGGCTATTTCTTGTGCCTGGCCTTGACCACACAATACATCATCCTGAACTACAGCACAGGCCT  590

Query  591  CTCCCAGGACCTTTTTCCCTACTGCAGTGAGGAGAGGCCGCCGATCGTCAAGAGGATAGGGAGACAGGAGTTCC  664
            .|||||||||||.||||||||||||||||||||||.|||.||.|||||||||||||||||.|||||||||||||
Sbjct  591  TTCCCAGGACCTGTTTCCCTACTGCAGTGAGGAGAAGCCACCCATCGTCAAGAGGATAGGCAGACAGGAGTTCC  664

Query  665  TGCTGGCGGGCCCCGGAGGGCTGGGCATGTTTGCCACAGTCGCAGGGATATCCCAGCGTGCCCCCGTGCACTGG  738
            |||||||.|||||.|||||..||||||||||||||||.||.||.|||||.||||||||||||||.|||||||||
Sbjct  665  TGCTGGCTGGCCCAGGAGGCTTGGGCATGTTTGCCACCGTGGCCGGGATTTCCCAGCGTGCCCCTGTGCACTGG  738

Query  739  TCGGAGAATGTGATTGGGGCGGCTGTGTCCTTTCCATACGTCATAGCGCTCGATGACGAATTCATCACAGTCCA  812
            ||.||.||||||||||||||.|||||.|.|||.||.||.||||||||||||||||||||||||||||||||.||
Sbjct  739  TCAGAAAATGTGATTGGGGCAGCTGTTTGCTTCCCCTATGTCATAGCGCTCGATGACGAATTCATCACAGTTCA  812

Query  813  CAGCATGTTGGATCAGCAACAGAAGCAGACGCTGCCCTTTAAGGAGGGCCATATCCTACAGGACTTTGAAGGAA  886
            ||||||||||||||||||.|||||.|||||.|||||||||||||||||.||.|||||.||||||||||||||||
Sbjct  813  CAGCATGTTGGATCAGCAGCAGAAACAGACCCTGCCCTTTAAGGAGGGGCACATCCTGCAGGACTTTGAAGGAA  886

Query  887  GAGTGATCGTTGCCACAAGTAAAGGAGTTTACATCTTGGTTCCATTACCTTTGGAAAAACAAATACAGGATCTT  960
            |||||||.||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||.
Sbjct  887  GAGTGATTGTTGCCACAAGTAAAGGAGTTTACATCTTGGTTCCATTACCTCTGGAAAAACAAATACAGGATCTG  960

Query  961  CTAGCAAGCCGCAGAGTAGAAGAGGCTTTGGTTTTAGCAAAAGGAGCCCGGAGGAACATTCCAAAGGAAAAATT  1034
            .||||||.|||.|||||.||.|||||||||||.||.||||||||||||||||||||||||||||||||.|||||
Sbjct  961  TTAGCAAACCGGAGAGTGGAGGAGGCTTTGGTCTTGGCAAAAGGAGCCCGGAGGAACATTCCAAAGGAGAAATT  1034

Query 1035  TCAGGTAATGTACAGAAGGATTCTGCAGCAGGCGGGATTTATACAGTTTGCACAACTTCAGTTCCTGGAAGCTA  1108
            |||||||||||||||.|||||||||||||||||.||.||||||||||||||||||||.||||||||||||||.|
Sbjct 1035  TCAGGTAATGTACAGGAGGATTCTGCAGCAGGCAGGCTTTATACAGTTTGCACAACTCCAGTTCCTGGAAGCCA  1108

Query 1109  AAGAGCTCTTCAGAAGCGGCCAGCTTGATGTCCGGGAGCTGATCTCTCTCTACCCCTTCCTGTTGCCCACCTCC  1182
            |||||||||||||||||.|||||||.||||||||||||||||||||||||||||||||.|||.|||||||||||
Sbjct 1109  AAGAGCTCTTCAGAAGCAGCCAGCTGGATGTCCGGGAGCTGATCTCTCTCTACCCCTTTCTGCTGCCCACCTCC  1182

Query 1183  TCCTCCTTCACCCGGTCCCACCCTCCTCTTCATGAGTACGCAGACCTGAACCAGCTGACCCAGGGGGACCAGGA  1256
            ||||||||||||||.||.||||||||||||||||||||||||||||||||||||||||||||.||.||||||||
Sbjct 1183  TCCTCCTTCACCCGCTCTCACCCTCCTCTTCATGAGTACGCAGACCTGAACCAGCTGACCCAAGGTGACCAGGA  1256

Query 1257  GAAGATGGCCAAGTGCAAACGCTTCCTCATGAGCTACCTGAACGAGGTCCGCAGCACAGAGGTAGCAAATGGCT  1330
            ||||||||||||||||||.|||||||||||||||||||||||.||..|||||||||||||||||||.|||||||
Sbjct 1257  GAAGATGGCCAAGTGCAAGCGCTTCCTCATGAGCTACCTGAATGAAATCCGCAGCACAGAGGTAGCTAATGGCT  1330

Query 1331  ACAAGGAGGACATCGACACAGCCTTGCTCAAACTGTATGCAGAGGCTGACCACGACAGCCTGCTGGACCTCCTG  1404
            |||||||.|||||||||||.|||||||||||.|||||||||||||||||||||||||||||.|||||||||.||
Sbjct 1331  ACAAGGAAGACATCGACACGGCCTTGCTCAAGCTGTATGCAGAGGCTGACCACGACAGCCTCCTGGACCTCTTG  1404

Query 1405  GTCACTGAGAACTTCTGTCTT-CTGACGGACAGTGCTGCCTGGCTAGAGAAGCACAAAAAGTATTTTGCACTTG  1477
            |||||||||||.||||| ||| |||||.|||||||||||||||||.|||||||||||||||||.||||||||.|
Sbjct 1405  GTCACTGAGAATTTCTG-CTTGCTGACAGACAGTGCTGCCTGGCTGGAGAAGCACAAAAAGTACTTTGCACTGG  1477

Query 1478  GACTGCTCTATCATTATAATAACCAAGATGCTGCTGCAGTTCAGTTGTGGGTGAACATTGTGAATGGCGATGTC  1551
            |.||||||||||||||.||.||.||||||||..||||.|||||||||||||||||||||||||||||.||..||
Sbjct 1478  GGCTGCTCTATCATTACAACAAACAAGATGCCTCTGCGGTTCAGTTGTGGGTGAACATTGTGAATGGGGACATC  1551

Query 1552  CAGGACTCCACACGCTCAGACCTGTATGAATACATCGTGGATTTTCTTACCTACTGCTTAGACGAGGAACTAGT  1625
            ||||||||.||||||||.||||||||||||||||||||.|||||.||||||||||||.|||||.|.||.||.||
Sbjct 1552  CAGGACTCTACACGCTCGGACCTGTATGAATACATCGTTGATTTCCTTACCTACTGCCTAGACCAAGAGCTGGT  1625

Query 1626  GTGGGCCTATGCTGATTGGGTCCTGCAGAAAAGTGAAGAGGTCGGAGTTCAGGTTTTCACCAAGAGACCTTTGG  1699
            ||||.||.|||||||.|||.|.||||||||||||||.|||.|.||||||||..|||||||||||||||||||||
Sbjct 1626  GTGGACCCATGCTGACTGGCTGCTGCAGAAAAGTGAGGAGATTGGAGTTCAAATTTTCACCAAGAGACCTTTGG  1699

Query 1700  ATGAACAGCAGAAGAACAGTTTTAATCCAGACGACATTATCAATTGCCTTAAAAAATACCCTAAAGCCCTTGTG  1773
            |.||.||||||.|||..|||||||||||||||.|||||||.|.||.||||||.|||||||||||||||||.||.
Sbjct 1700  ACGAGCAGCAGCAGACTAGTTTTAATCCAGACAACATTATTAGTTCCCTTAAGAAATACCCTAAAGCCCTGGTT  1773

Query 1774  AAGTATCTGGAACATCTTGTGATAGACAAGAGACTGCAGAAAGAAGAGTATCACACCCACTTAGCTGTGCTGTA  1847
            |||||||||||||||||.|||||.||||.||||.||||||||||||||||.|||||||||.|.||..|.||.||
Sbjct 1774  AAGTATCTGGAACATCTCGTGATCGACAGGAGATTGCAGAAAGAAGAGTACCACACCCACCTTGCCATCCTCTA  1847

Query 1848  CCTGGAAGAGGTGCTGCTGCAGAGGGCCTCCGCCAGTGGCAAGGGTGCAGAGGCCACCGAGACGCAGGCCAAGC  1921
            ||||||.||.|||||||.||||||||..|||.|..|.|||||.|.||.|||.|||||.|||||.||||||||.|
Sbjct 1848  CCTGGAGGAAGTGCTGCGGCAGAGGGTATCCACTGGGGGCAAAGATGTAGAAGCCACTGAGACACAGGCCAAAC  1921

Query 1922  TGCGGCGGCTGCTCCAGAAATCTGATTTATACCGAGTCCACTTTCTTCTCGAGAGGCTGCAGGGAGCTGGCCTG  1995
            |.|||.|.||.||||||||.|||||.||.|||||.||||||||..|....||||...|.|||||.||.||||||
Sbjct 1922  TCCGGAGACTACTCCAGAAGTCTGACTTGTACCGCGTCCACTTGTTGAAAGAGAAAGTCCAGGGTGCCGGCCTG  1995

Query 1996  CCCATGGAGAGCGCCATCCTGCACGGGAAGCTGGGCGAGCATGAGAAGGCGCTGCATATCCTGGTGCACGAGCT  2069
            ||||||||.||.||||||||.||||||||||||||||||||.||||||||.|||||.|||||||||||||||.|
Sbjct 1996  CCCATGGAAAGTGCCATCCTCCACGGGAAGCTGGGCGAGCACGAGAAGGCCCTGCACATCCTGGTGCACGAGAT  2069

Query 2070  GCAGGACTTTGCAGCGGCCGAGGACTACTGCCTGTGGTGCTCCGAGGGCCGAGACCCACCCCACCGCCAGCAAC  2143
            |..||||||..|.||.||.||||||||||||||||||.||||||||||.|..|...||.||..|||.||||..|
Sbjct 2070  GGGGGACTTCTCTGCAGCTGAGGACTACTGCCTGTGGAGCTCCGAGGGTCAGGGTGCAGCCTGCCGTCAGCGCC  2143

Query 2144  TCTTTCACACGCTGCTGGCCATCTACCTGCATGCTGGCCCCACTGCCCACGAGCTGGCCGTGGCTGCCGTGGAC  2217
            ||||.||||||.||||.|||||.|||||.|.|||.||||||.|||||||.||.|||.|.|||||.||.||||||
Sbjct 2144  TCTTCCACACGTTGCTCGCCATGTACCTCCGTGCAGGCCCCTCTGCCCAGGATCTGACAGTGGCCGCTGTGGAC  2217

Query 2218  CTGCTGAACCGCCACGCCACCGAATTTGATG-CAGCCCAGGTGCTGCAGATGCTGCCTGACACCTGGTCAGTGC  2290
            .|||||||||..||.||||..|||||||||| || |||||||.||.|||.|||||||.|||||||||||.||||
Sbjct 2218  TTGCTGAACCATCATGCCAGGGAATTTGATGTCA-CCCAGGTCCTACAGCTGCTGCCAGACACCTGGTCCGTGC  2290

Query 2291  AGCTCCTCTGCCCATTCCTGATGGGGGCCATGAGGGACAGCATCCATGCCAGGAGGACCATGCAGGTGGCTCTC  2364
            ||||.||||||||||||||.||||||||.|||||||||||.|||||||||||||||||||..||||||||.||.
Sbjct 2291  AGCTTCTCTGCCCATTCCTCATGGGGGCTATGAGGGACAGTATCCATGCCAGGAGGACCACACAGGTGGCCCTT  2364

Query 2365  GGCCTGGCCAGGTCCGAAAACTTAATCTACACCTACGATAAGATGAAGTTGAAAGGAAGCTCAATCCAACTCTC  2438
            ||||||||||..||.||||||.|.||.||||..||.||||||||||||.||||.||.|...||.|||..|||||
Sbjct 2365  GGCCTGGCCAAATCAGAAAACCTGATTTACATGTATGATAAGATGAAGCTGAAGGGCAATGCAGTCCGGCTCTC  2438

Query 2439  AGACAAAAAGCTTTGTCAGATATGCCAAAATCCCTTT-TGTGAGCCTGTGTTTGTTAGATACCCAAATGGTGGT  2511
            |||...|.|||||||.|||.|.|||||.|| |||||| .||||.|||||||||||.||||||||||||||.||.
Sbjct 2439  AGAACGAGAGCTTTGCCAGCTCTGCCAGAA-CCCTTTCGGTGAACCTGTGTTTGTCAGATACCCAAATGGAGGG  2511

Query 2512  CTTGTGCACACCCACTGTGCCGCCAGCAGACACACAAACCCCAGCTCATCCAGTCCTGGCACTCGGACT  2580
            |||||||||||||||||||||||||||||||||||...|||||||||..||||.|||||||||||||||
Sbjct 2512  CTTGTGCACACCCACTGTGCCGCCAGCAGACACACGGCCCCCAGCTCGCCCAGCCCTGGCACTCGGACT  2580

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