Nucleotide Global Alignment
Description
- Query:
- TRCN0000466550
- Subject:
- NR_163907.1
- Aligned Length:
- 2778
- Identities:
- 1769
- Gaps:
- 1009
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCGTCGCTAAGGAGCGACGGGCTGTCGGCCAGACCCCGAGTTCTCGGTGCGCTCAGCGGCCGCCGACGCTAGGA 74
Query 1 -----------------------ATGAGGCCCCGGAAAGCCTTCCTGCTCCTGCTGCTCTTGGGGCTGGTGCAG 51
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GGCCGCGCTCCGCCCCCGCTACCATGAGGCCCCGGAAAGCCTTCCTGCTCCTGCTGCTCTTGGGGCTGGTGCAG 148
Query 52 CTGCTGGCCGTGGCGGGTGCCGAGGGCCCGGACGAGGATTCTTCTAACAGAGAAAATGCCATTGAGGATGAAGA 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CTGCTGGCCGTGGCGGGTGCCGAGGGCCCGGACGAGGATTCTTCTAACAGAGAAAATGCCATTGAGGATGAAGA 222
Query 126 GGAGGAGGAGGAGGAAGATGATGATGAGGAAGAAGACGACTTGGAAGTTAAGGAAGAAAATGGAGTCTTGGTCC 199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GGAGGAGGAGGAGGAAGATGATGATGAGGAAGAAGACGACTTGGAAGTTAAGGAAGAAAATGGAGTCTTGGTCC 296
Query 200 TAAATGATGCAAACTTTGATAATTTTGTGGCTGACAAAGACACAGTGCTGCTGGAGTTTTATGCTCCATGGTGT 273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TAAATGATGCAAACTTTGATAATTTTGTGGCTGACAAAGACACAGTGCTGCTGGAGTTTTATGCTCCATGGTGT 370
Query 274 GGACATTGCAAGCAGTTTGCTCCGGAATATGAAAAAATTGCCAACATATTAAAGGATAAAGATCCTCCCATTCC 347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GGACATTGCAAGCAGTTTGCTCCGGAATATGAAAAAATTGCCAACATATTAAAGGATAAAGATCCTCCCATTCC 444
Query 348 TGTTGCCAAGATCGATGCAACCTCAGCGTCTGTGCTGGCCAGCAGGTTTGATGTGAGTGGCTACCCCACCATCA 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TGTTGCCAAGATCGATGCAACCTCAGCGTCTGTGCTGGCCAGCAGGTTTGATGTGAGTGGCTACCCCACCATCA 518
Query 422 AGATCCTTAAGAAGGGGCAGGCTGTAGACTACGAGGGCTCCAGAACCCAGGAAGAAATTGTTGCCAAGGTCAGA 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AGATCCTTAAGAAGGGGCAGGCTGTAGACTACGAGGGCTCCAGAACCCAGGAAGAAATTGTTGCCAAGGTCAGA 592
Query 496 GAAGTCTCCCAGCCCGACTGGACGCCTCCACCAGAAGTCACGCTTGTGTTGACCAAAGAGAACTTTGATGAAGT 569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GAAGTCTCCCAGCCCGACTGGACGCCTCCACCAGAAGTCACGCTTGTGTTGACCAAAGAGAACTTTGATGAAGT 666
Query 570 TGTGAATGATGCAGATATCATTCTGGTGGAGTTTTATGCCCCATGGTGTGGACACTGCAAGAAACTTGCCCCCG 643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TGTGAATGATGCAGATATCATTCTGGTGGAGTTTTATGCCCCATGGTGTGGACACTGCAAGAAACTTGCCCCCG 740
Query 644 AGTATGAGAAGGCCGCCAAGGAGCTCAGCAAGCGTTCTCCTCCAATTCCCCTGGCAAAGGTCGACGCCACCGCA 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AGTATGAGAAGGCCGCCAAGGAGCTCAGCAAGCGTTCTCCTCCAATTCCCCTGGCAAAGGTCGACGCCACCGCA 814
Query 718 GAAACAGACCTGGCCAAGAGGTTTGATGTCTCTGGCTATCCCACCCTGAAAATTTTCCGCAAAGGAAGGCCTTA 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GAAACAGACCTGGCCAAGAGGTTTGATGTCTCTGGCTATCCCACCCTGAAAATTTTCCGCAAAGGAAGGCCTTA 888
Query 792 TGACTACAACGGCCCACGAGAAAAATATGGAATCGTTGATTACATGATCGAGCAGTCCGGGCCTCCCTCCAAGG 865
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TGACTACAACGGCCCACGAGAAAAATATGGAATCGTTGATTACATGATCGAGCAGTCCGGGCCTCCCTCCAAGG 962
Query 866 AGATTCTGACCCTGAAGCAGGTCCAGGAGTTCCTGAAGGATGGAGACGATGTCATCATCATCGGGGTCTTTAAG 939
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 AGATTCTGACCCTGAAGCAGGTCCAGGAGTTCCTGAAGGATGGAGACGATGTCATCATCATCGGGGTCTTTAAG 1036
Query 940 GGGGAGAGTGACCCAGCCTACCAGCAATACCAGGATGCCGCTAACAACCTGAGAGAAGATTACAAATTTCACCA 1013
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GGGGAGAGTGACCCAGCCTACCAGCAATACCAGGATGCCGCTAACAACCTGAGAGAAGATTACAAATTTCACCA 1110
Query 1014 CACTTTCAGCACAGAAATAGCAAAGTTCTTGAAAGTCTCCCAGGGGCAGTTGGTTGTAATGCAGCCTGAGAAAT 1087
||||||||||||||||||||||||
Sbjct 1111 CACTTTCAGCACAGAAATAGCAAA-------------------------------------------------- 1134
Query 1088 TCCAGTCCAAGTATGAGCCCCGGAGCCACATGATGGACGTCCAGGGCTCCACCCAGGACTCGGCCATCAAGGAC 1161
Sbjct 1135 -------------------------------------------------------------------------- 1134
Query 1162 TTCGTGCTGAAGTACGCCCTGCCCCTGGTTGGCCACCGCAAGGTGTCAAACGATGCTAAGCGCTACACCAGGCG 1235
||||||||||||||||||||||||||||||||
Sbjct 1135 ------------------------------------------GTGTCAAACGATGCTAAGCGCTACACCAGGCG 1166
Query 1236 CCCCCTGGTGGTCGTCTACTACAGTGTGGACTTCAGCTTTGATTACAGAGCTGCAACTCAGTTTTGGCGGAGCA 1309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1167 CCCCCTGGTGGTCGTCTACTACAGTGTGGACTTCAGCTTTGATTACAGAGCTGCAACTCAGTTTTGGCGGAGCA 1240
Query 1310 AAGTCCTAGAGGTGGCCAAGGACTTCCCTGAGTACACCTTTGCCATTGCGGACGAAGAGGACTATGCTGGGGAG 1383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1241 AAGTCCTAGAGGTGGCCAAGGACTTCCCTGAGTACACCTTTGCCATTGCGGACGAAGAGGACTATGCTGGGGAG 1314
Query 1384 GTGAAGGACCTGGGGCTCAGCGAGAGTGGGGAGGATGTCAATGCCGCCATCCTGGACGAGAGTGGGAAGAAGTT 1457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1315 GTGAAGGACCTGGGGCTCAGCGAGAGTGGGGAGGATGTCAATGCCGCCATCCTGGACGAGAGTGGGAAGAAGTT 1388
Query 1458 CGCCATGGAGCCAGAGGAGTTTGACTCTGACACCCTCCGCGAGTTTGTCACTGCTTTCAAAAAAGGAAAACTGA 1531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1389 CGCCATGGAGCCAGAGGAGTTTGACTCTGACACCCTCCGCGAGTTTGTCACTGCTTTCAAAAAAGGAAAACTGA 1462
Query 1532 AGCCAGTCATCAAATCCCAGCCAGTGCCCAAGAACAACAAGGGACCCGTCAAGGTCGTGGTGGGAAAGACCTTT 1605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1463 AGCCAGTCATCAAATCCCAGCCAGTGCCCAAGAACAACAAGGGACCCGTCAAGGTCGTGGTGGGAAAGACCTTT 1536
Query 1606 GACTCCATTGTGATGGACCCCAAGAAGGACGTCCTCATCGAGTTCTACGCGCCATGGTGCGGGCACTGCAAGCA 1679
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1537 GACTCCATTGTGATGGACCCCAAGAAGGACGTCCTCATCGAGTTCTACGCGCCATGGTGCGGGCACTGCAAGCA 1610
Query 1680 GCTAGAGCCCGTGTACAACAGCCTGGCCAAGAAGTACAAGGGCCAAAAGGGCCTGGTCATCGCCAAGATGGACG 1753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1611 GCTAGAGCCCGTGTACAACAGCCTGGCCAAGAAGTACAAGGGCCAAAAGGGCCTGGTCATCGCCAAGATGGACG 1684
Query 1754 CCACTGCCAACGACGTCCCCAGCGACCGCTATAAGGTGGAGGGCTTCCCCACCATCTACTTCGCCCCCAGTGGG 1827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1685 CCACTGCCAACGACGTCCCCAGCGACCGCTATAAGGTGGAGGGCTTCCCCACCATCTACTTCGCCCCCAGTGGG 1758
Query 1828 GACAAAAAGAACCCAGTTAAATTTGAGGGTGGAGACAGAGATCTGGAGCATTTGAGCAAGTTTATAGAAGAACA 1901
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1759 GACAAAAAGAACCCAGTTAAATTTGAGGGTGGAGACAGAGATCTGGAGCATTTGAGCAAGTTTATAGAAGAACA 1832
Query 1902 TGCCACAAAACTGAGCAGGACCAAGGAAGAGCTT---------------------------------------- 1935
||||||||||||||||||||||||||||||||||
Sbjct 1833 TGCCACAAAACTGAGCAGGACCAAGGAAGAGCTTTGAAGGCCTGAGGTCTGCGGAAGGTGGGAGGAGGCAGACG 1906
Query 1936 -------------------------------------------------------------------------- 1935
Sbjct 1907 CCCTGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGGCCGGCAACAAACGACAGTATCTCGGATTCCTTTTTTT 1980
Query 1936 -------------------------------------------------------------------------- 1935
Sbjct 1981 TTTTTTTTAATTTTTTATACTTTGGTGTTTCACTTCATGCTCTGAATACTGAATAACCATGAATGACTGAATAG 2054
Query 1936 -------------------------------------------------------------------------- 1935
Sbjct 2055 TTTAGTCCAGATTTTTACAGAGGATACATCTATTTTTATCATTATTTGGGGTTTGAAAAATTTTTTTTTACACC 2128
Query 1936 -------------------------------------------------------------------------- 1935
Sbjct 2129 TTCTAATTTCTTTATTTCTCAAAGCAGATAATTCTTCTGTGTGAAAATGTTTTCTTTTTTTAATTTAAGGTTTA 2202
Query 1936 -------------------------------------------------------------------------- 1935
Sbjct 2203 AAATTCCTTTTCCAAATCATGTTGATTTTGCTCTTTGCTTTTTCGTTGTCTGAGAAATTGTTGGCGTAGATTTG 2276
Query 1936 -------------------------------------------------------------------------- 1935
Sbjct 2277 GCTTCTGGTATGTGTTTCTGATTGCTTCCTGTTGAGCACAAAGTGAGAGCTGCCACTGAGCAGCCCTGCCAGGG 2350
Query 1936 -------------------------------------------------------------------------- 1935
Sbjct 2351 GTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGGGCTGGGGGCAAAGGGGCATGATCCA 2424
Query 1936 -------------------------------------------------------------------------- 1935
Sbjct 2425 GGGTCCCCCAGGGTGGGCTCAGCTCCAGGGAGAGGCCACCCACGTGGCAGCCCCACCTCTTGAGAGCCCCCAGT 2498
Query 1936 -------------------------------------------------------------------------- 1935
Sbjct 2499 GCCGGAGCAGAAAGGACCCTGGACCCAGAGGCAGATACTGCGGGGTGGTAGAAAAGGTAGAGTAGGCTGTGGCA 2572
Query 1936 ---------------------------------------- 1935
Sbjct 2573 ATGGAATAAAACACGATTAAAAACGTTAAGAACTGCGTTA 2612
